FFCP PHASE1:Hg19::chrX:140270647..140270745,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23641 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6548 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-344bp_to_AF086537_5end | |||
|coexpression_cluster_id=C4853 | |||
|description=CAGE_peak_3_at_LDOC1_5end | |||
|id=chrX:140270647..140270745,- | |||
|ontology_enrichment_celltype=CL:0000222!8.58e-14!119;CL:0000055!9.53e-12!180;CL:0000183!3.00e-11!59;CL:0000192!2.31e-10!42;CL:0000514!2.31e-10!42;CL:0000187!7.86e-10!54;CL:0000680!9.08e-10!57;CL:0000056!9.08e-10!57;CL:0000355!9.08e-10!57;CL:0000393!1.23e-09!60;CL:0000211!1.23e-09!60;CL:0000359!4.67e-09!32;CL:0000220!7.15e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.15e-09;32!CL:0000192;7.95e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,9.60e-14,121;CL:0000192,4.49e-10,43;CL:0000514,4.49e-10,43;CL:0000187,8.26e-10,55;CL:0000680,1.57e-09,58;CL:0000056,1.57e-09,58;CL:0000355,1.57e-09,58;CL:0000393,1.78e-09,61;CL:0000211,1.78e-09,61;CL:0000359,6.56e-09,32;CL:0002321,9.54e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;7.95e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;1.74e-10;32!UBERON:0002791;1.96e-10;32!UBERON:0001893;2.02e-10;34!UBERON:0003528;3.13e-10;34!UBERON:0002020;3.13e-10;34!UBERON:0002619;3.20e-10;22!UBERON:0002780;8.09e-10;41!UBERON:0001890;8.09e-10;41!UBERON:0001950;1.41e-09;20!UBERON:0000956;3.03e-09;25!UBERON:0000203;3.03e-09;25!UBERON:0000073;4.10e-09;53!UBERON:0002616;4.10e-09;53!UBERON:0004573;1.85e-08;33!UBERON:0004571;1.85e-08;33!UBERON:0001637;2.96e-08;42!UBERON:0003509;2.96e-08;42!UBERON:0004572;2.96e-08;42!UBERON:0003914;1.97e-07;74!UBERON:0000955;2.77e-07;68!UBERON:0001017;4.10e-07;75!UBERON:0007500;7.08e-07;56!UBERON:0001981;7.08e-07;56!UBERON:0004537;7.08e-07;56 | |||
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| |||
|short_description=p3@LDOC1 | |||
}} |
Revision as of 07:14, 23 January 2014
Short description: | p3@LDOC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LDOC1_5end |
Coexpression cluster: | C4853_Renal_aorta_Mesenchymal_pituitary_Smooth_Fibroblast_mesothelioma |
Association with transcript: | -344bp_to_AF086537_5end |
EntrezGene: | LDOC1 |
HGNC: | 6548 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 9.60e-14 | 121 |
smooth muscle cell | 4.49e-10 | 43 |
smooth muscle myoblast | 4.49e-10 | 43 |
muscle cell | 8.26e-10 | 55 |
muscle precursor cell | 1.57e-09 | 58 |
myoblast | 1.57e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.57e-09 | 58 |
electrically responsive cell | 1.78e-09 | 61 |
electrically active cell | 1.78e-09 | 61 |
vascular associated smooth muscle cell | 6.56e-09 | 32 |
embryonic cell | 9.54e-07 | 250 |