FFCP PHASE1:Hg19::chrX:80065319..80065351,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=254065 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17342 | |||
|TSSclassifier=strong | |||
|UniProt=Q6RI45 | |||
|association_with_transcript=-86bp_to_NM_153252,uc004edt.2,uc004edu.2,uc004edv.2,uc004edw.2,uc004edx.2,uc004edy.2,uc004edz.2,uc004eea.2,uc004eeb.2_5end | |||
|description=CAGE_peak_3_at_BRWD3_5end | |||
|id=chrX:80065319..80065351,- | |||
|ontology_enrichment_celltype=CL:0000738!1.05e-22!140;CL:0002087!7.07e-19!119;CL:0002031!8.74e-19!124;CL:0000037!1.42e-18!172;CL:0000566!1.42e-18!172;CL:0002032!6.85e-17!165;CL:0000837!6.85e-17!165;CL:0000988!5.15e-16!182;CL:0000766!9.27e-13!76;CL:0000557!2.70e-11!71;CL:0000860!3.17e-11!45;CL:0000839!1.30e-10!70;CL:0002057!2.43e-10!42;CL:0002009!6.62e-10!65;CL:0002194!1.06e-09!63;CL:0000576!1.06e-09!63;CL:0000040!1.06e-09!63;CL:0000559!1.06e-09!63;CL:0000763!6.90e-09!112;CL:0000049!6.90e-09!112;CL:0000542!9.47e-09!53;CL:0000051!9.47e-09!53;CL:0000838!1.76e-08!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.78e-10;33!CL:0002057;3.78e-10;33!CL:0000576;3.45e-08;48!CL:0002087;7.09e-08;104!CL:0000473;2.86e-07;39!CL:0000234;2.86e-07;39!CL:0000766;4.73e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.37e-24,136;CL:0002087,2.13e-19,115;CL:0002031,1.13e-18,120;CL:0000037,4.78e-18,168;CL:0002032,4.77e-16,161;CL:0000837,4.77e-16,161;CL:0000988,5.77e-16,177;CL:0000766,1.78e-12,72;CL:0000860,4.89e-12,42;CL:0002057,4.89e-12,42;CL:0000473,8.63e-11,48;CL:0000234,8.63e-11,48;CL:0000557,1.06e-10,67;CL:0000542,7.57e-10,53;CL:0000051,7.57e-10,53;CL:0000839,1.33e-09,66;CL:0000838,1.67e-09,52;CL:0002009,3.95e-09,61;CL:0002194,5.92e-09,59;CL:0000576,5.92e-09,59;CL:0000040,5.92e-09,59;CL:0000559,5.92e-09,59;CL:0000763,1.77e-07,108;CL:0000049,1.77e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;4.01e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.86e-14!115;UBERON:0002390!8.29e-13!102;UBERON:0003061!8.29e-13!102;UBERON:0002193!1.49e-11!112;UBERON:0002371!5.82e-09!80;UBERON:0001474!9.86e-09!86;UBERON:0001049!5.10e-07!57;UBERON:0005068!5.10e-07!57;UBERON:0006241!5.10e-07!57;UBERON:0007135!5.10e-07!57;UBERON:0003080!5.34e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.85e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.73e-12,98;UBERON:0003061,1.73e-12,98;UBERON:0002193,1.11e-10,108;UBERON:0007023,3.38e-09,114;UBERON:0002371,3.44e-08,76;UBERON:0002405,3.41e-07,93;UBERON:0001474,4.43e-07,82 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0,0,0,0.522371256399677,0,0,0,0.263766978228454,0.37129905888014,0.331397375727916,1.34465029290355,0,0,0.487932798790507,0,0,0,0.85870796139317,1.23186982565596,1.25542639594803,3.132949635666,2.95562122019805,2.04648031415566,1.57345710739562,1.53531759238885,0.928896739896456,0,0,0.369754010166788,0.542270404062111,1.13735385989937,1.17440175733939,0.553995408531877,1.60435557976113,3.47217393145363,3.13481663935894,1.94336199611388,2.57575567634187,2.90796477559129,3.77875943688809,2.91100873425379,2.32429036905685,3.28934310417461,0.309706370895104,2.01384674625505,1.7931249457037,1.6553756092201,3.10271112662957,3.87290810150296,1.35426486594342,2.25890807451126,1.63743690034707,1.34834090667051,3.67300670845083,1.92557416245656,1.27867425159808,0.989553900560148,2.59302754908121,0,2.32167390902867,4.53908179752912,1.86846674698672,4.52247597462138,2.08593167368081,0.868755378820466,1.21079900526674,2.94622108790052,1.58231193720442,1.26753171787165,1.27562579979026,1.25795187305026,2.69588714751588,1.05123824989054,1.12507910687956,0.570025487482497,1.59133341759272,1.46131323011707,3.51992488922645,4.36910889009705,1.77901850772711,2.56038133539904,5.60554381850417,3.4485146397269,1.98313461835459,1.90810750907073,1.1384259382189,5.28513470433845,6.49864487812889,0,2.80254281490768,1.31692042387539,2.75393678159366,1.96505381374582,1.02800749499755,1.5046784585161,1.30368906653436,1.4203434172042,0,0.334231370655521,0.883817722424512,0.443067789167242,0.541607727530031,0.896639238079726,1.43065282315866,0.328875809207352,0,0.579606171470105,1.18629250529648,0.802622484269139,0,0.566546713487831,0.383220493601921,1.03088233644789,0.253019692019503,3.18565414324097,1.95325036156926,1.90090408889675,2.25862678616659,1.79181255616186,1.24930726552346,3.31488152861624,2.46338399076314,2.21767417547206,1.33720097891754,2.60683926989038,2.43806866313962,0,0.12786256184353,0,0,0.434539556882471,0,0.486634870302636,0.472674085820339,0.886917589850256,0.702678285545008,0.851363990735132,0,0,1.29818957461873,0.870648686496336,0.531831842075461,0.953962497221368,1.71598473234038,1.11437250398869,0.39752481473341,0,0,0,0.419499436209906,0.275118041940067,0.417989933073621,0.775250277507987,0.71153252537342,0.66944122552934,0,0,0,0,0,1.3394959242612,0.898117490504679,0.675668882899933,0,0,0.549605231791222,7.9068250461638,0,0,0.993943903390637,0.379891534993739,0.529636723252875,0.573673241497627,0,0,0,0.74000264525148,0.311211035399766,0.942974704487816,0.653847612453835,0,0.576175924479999,0,0,0,0.298897361103602,0.587172493218824,0,0.280901613404497,0.61246251376468,0.737005903870608,0.413303124703062,1.18800285728205,0.247266929278557,0,0,0.336672227908132,0.875829639103749,0,0,0.30648779579902,0.300476117813194,0.680593098960126,0.538168907066586,0.640672166455702,0.423863802319124,0,0.309157587715317,0.515281080091258,0.18611685633159,0.843881661206331,0.389748020644795,1.00973509697646,0.368199594569197,0.161646056818812,0.355009592516614,0.604512589365842,0.339121184620975,0.386521706326594,0.272746120590835,1.43402297694502,4.39105342066543,1.72288698817931,1.2781333715647,1.7622379352613,3.02785021050754,0,1.56449532329816,0.643240938192885,0,0,0,0.236613600079688,0,0,0.441175890929576,0.217879444092406,0.237270619111097,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,1.96565443335525,0.590789906681404,1.32438929824395,0.614942192715568,0.514703430895577,1.09750285408626,1.1240175325762,0.603173834469785,1.29623823221941,0.325808305310325,0,0,0.927443239800615,0.234817388471643,0.577465791044295,0,0.951270761172991,0,0,2.21595305478658,0.234004265139238,0.297262324577456,0,0,0.141775097242386,0.179117045405697,0.581267877027924,0,0.492663237895943,1.49682337822484,4.14656231081544,3.45887888200707,3.53478813593864,0.380987365753014,0,0,0,1.33675740514321,0.901029173531752,1.14330573052231,0.112131084345361,0,0.22001485746285,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,1.06617584622764,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0.502257091432126,2.10833939483032,0,0,0,0.579125226670317,0.61642896765115,0.537182889719687,0.112085143993527,1.37921532141349,1.94064817373566,2.31017465303547,0.76228387266739,0,0.773288812777695,1.00509759200609,1.91381625495949,18.7251755986796,8.97484377612075,9.53155680902882,0.36807447515742,0,0.271265023699736,1.24782516918484,0.356857977594324,0.630809660135739,0.702848489956279,0.300946099727719,0,0,0,0,0.434418072340414,0.391602314925481,0.343143423810856,1.6541442089831,4.09856981555372,2.02782359826544,0.303127571446259,0,0,0,0.460385919864187,0.280660094433074,0,0,0,0,0,0.710246901252508,0.0821271560138091,0.519254429183621,0.116210378459959,1.32945394550784,0,0.552485933615378,0.574072240823034,0,0.131124414959424,0,1.00119938235739,0,0,0.633309773357254,0,0.170093705276516,0.863663664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| |||
|short_description=p3@BRWD3 | |||
}} |
Revision as of 06:11, 23 January 2014
Short description: | p3@BRWD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BRWD3_5end |
Coexpression cluster: | NA |
Association with transcript: | -86bp_to_NM_153252, uc004edt.2, uc004edu.2, uc004edv.2, uc004edw.2, uc004edx.2, uc004edy.2, uc004edz.2, uc004eea.2, uc004eeb.2_5end |
EntrezGene: | BRWD3 |
HGNC: | 17342 |
UniProt: | Q6RI45 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 7.37e-24 | 136 |
nongranular leukocyte | 2.13e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 1.13e-18 | 120 |
hematopoietic stem cell | 4.78e-18 | 168 |
hematopoietic oligopotent progenitor cell | 4.77e-16 | 161 |
hematopoietic multipotent progenitor cell | 4.77e-16 | 161 |
hematopoietic cell | 5.77e-16 | 177 |
myeloid leukocyte | 1.78e-12 | 72 |
classical monocyte | 4.89e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.89e-12 | 42 |
defensive cell | 8.63e-11 | 48 |
phagocyte | 8.63e-11 | 48 |
granulocyte monocyte progenitor cell | 1.06e-10 | 67 |
lymphocyte | 7.57e-10 | 53 |
common lymphoid progenitor | 7.57e-10 | 53 |
myeloid lineage restricted progenitor cell | 1.33e-09 | 66 |
lymphoid lineage restricted progenitor cell | 1.67e-09 | 52 |
macrophage dendritic cell progenitor | 3.95e-09 | 61 |
monopoietic cell | 5.92e-09 | 59 |
monocyte | 5.92e-09 | 59 |
monoblast | 5.92e-09 | 59 |
promonocyte | 5.92e-09 | 59 |
myeloid cell | 1.77e-07 | 108 |
common myeloid progenitor | 1.77e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.73e-12 | 98 |
blood island | 1.73e-12 | 98 |
hemolymphoid system | 1.11e-10 | 108 |
adult organism | 3.38e-09 | 114 |
bone marrow | 3.44e-08 | 76 |
immune system | 3.41e-07 | 93 |
bone element | 4.43e-07 | 82 |