FFCP PHASE1:Hg19::chrX:51638461..51638473,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9500 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6813 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-278bp_to_ENST00000482599_5end | |||
|coexpression_cluster_id=C4875 | |||
|description=CAGE_peak_7_at_MAGED1_5end | |||
|id=chrX:51638461..51638473,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.49e-18!180;CL:0000393!3.18e-12!60;CL:0000211!3.18e-12!60;CL:0000183!6.00e-12!59;CL:0000680!1.67e-11!57;CL:0000056!1.67e-11!57;CL:0000355!1.67e-11!57;CL:0000187!5.50e-11!54;CL:0000192!4.80e-10!42;CL:0000514!4.80e-10!42;CL:0000222!2.30e-08!119;CL:0002321!4.01e-08!248;CL:0000057!6.39e-08!75;CL:0000220!7.66e-08!246;CL:0000359!1.85e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000192;1.70e-07;43!CL:0000134;2.28e-07;55!CL:0000359;3.10e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,5.17e-11,61;CL:0000211,5.17e-11,61;CL:0000680,1.51e-10,58;CL:0000056,1.51e-10,58;CL:0000355,1.51e-10,58;CL:0000187,6.61e-10,55;CL:0000192,2.80e-09,43;CL:0000514,2.80e-09,43;CL:0000359,5.81e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;1.70e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.94e-13!83;UBERON:0002329!2.94e-13!83;UBERON:0003077!2.94e-13!83;UBERON:0003059!2.94e-13!83;UBERON:0007282!2.94e-13!83;UBERON:0009618!2.94e-13!83;UBERON:0007285!2.94e-13!83;UBERON:0004290!4.85e-12!70;UBERON:0001134!2.02e-11!61;UBERON:0002036!2.02e-11!61;UBERON:0003082!2.02e-11!61;UBERON:0002385!2.61e-11!63;UBERON:0001015!2.61e-11!63;UBERON:0000383!2.61e-11!63;UBERON:0000475!4.73e-11!365;UBERON:0005256!2.24e-10!143;UBERON:0000481!3.74e-10!347;UBERON:0000486!5.25e-10!82;UBERON:0000119!1.21e-09!312;UBERON:0000483!1.87e-09!309;UBERON:0002100!3.55e-08!216;UBERON:0001637!8.68e-08!42;UBERON:0003509!8.68e-08!42;UBERON:0004572!8.68e-08!42;UBERON:0000490!1.96e-07!138;UBERON:0000468!2.91e-07!659;UBERON:0004573!6.29e-07!33;UBERON:0004571!6.29e-07!33;UBERON:0000477!8.08e-07!286 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,6.37e-12,78;UBERON:0007524,8.61e-12,73;UBERON:0003077,3.24e-11,72;UBERON:0007285,3.24e-11,72;UBERON:0002329,7.20e-11,71;UBERON:0003059,7.20e-11,71;UBERON:0007282,7.20e-11,71;UBERON:0004290,7.20e-11,71;UBERON:0009618,7.20e-11,71;UBERON:0001134,4.39e-10,62;UBERON:0002036,4.39e-10,62;UBERON:0003082,4.39e-10,62;UBERON:0002385,4.98e-10,64;UBERON:0001015,4.98e-10,64;UBERON:0000383,4.98e-10,64;UBERON:0000486,1.87e-09,83;UBERON:0005256,3.99e-09,122;UBERON:0003104,2.17e-08,160;UBERON:0009142,2.17e-08,160;UBERON:0001637,2.91e-07,42;UBERON:0003509,2.91e-07,42;UBERON:0004572,2.91e-07,42;UBERON:0000490,9.32e-07,148 | |||
|phase1_expression=0.726713517082227,1.71280419112787,0.563817616383885,1.0007329835313,2.68176656656373,4.36169262050184,0,0,0,0,0,0.218441372130172,1.05506791291381,1.8564952944007,1.98838425436749,4.03395087871065,3.61616716814386,2.19093027116212,1.95173119516203,0,3.4680117511523,3.13454721478088,0.572471974262113,1.50561867580173,0.502170558379211,0.764134057479513,0.656804715599566,1.10195093839151,0,0,0,0,0.30120591877825,1.47901604066715,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0,0,0.768547918354051,0.130059347559878,0,0,0.579606171470105,0,0,0,0.226618685395132,0,0,0.253019692019503,0.318565414324097,0,0,0,0,0,0,0,0,0,0.144824403882799,0,1.34140171940727,0.255725123687061,0.361439152384566,1.50401373190767,2.02785126545153,0,2.43317435151318,0.756278537312543,3.1042115644759,1.14185221401064,0.523916301990851,0,0,0.324547393654683,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,1.37559020970034,1.8809546988313,0.258416759169329,0.35576626268671,0,0,0,0.732186172644509,0.735326160691737,3.24056779152704,0.625098097988558,1.34717623575702,0.337834441449967,0,0,0.732806975721629,0,0,0,1.98788780678127,1.51956613997496,1.19168262731897,3.15520282823695,0.709336764396714,2.80338800071154,0,1.97334038733728,0,1.75123873690594,0.653847612453835,0.454072282934794,3.45705554687999,0,0.624320153660641,1.1409436430889,1.94283284717341,2.11382097558777,0.647491777472526,1.12360645361799,0.204154171254893,3.31652656741774,0.619954687054593,0,3.4617370098998,0,3.59309070908119,0.336672227908132,1.62654075833553,0,0.438977620880838,4.59731693698529,0.751190294532984,0.453728732640084,2.69084453533293,0.213557388818567,0.423863802319124,1.80054657650641,1.03052529238439,3.86460810068444,0.18611685633159,0.506328996723799,1.26668106709558,3.02920529092937,0.184099797284599,1.45481451136931,1.77504796258307,0.705264687593482,0.508681776931463,0,0,0,1.34171076742555,0.927708378250397,1.97529702878181,1.7622379352613,2.52320850875628,0.72995471815166,0,8.36213219650751,0,5.57241513638375,5.77503585335668,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0.435758888184812,0,0.134831308160164,0,0.38474715694639,0,1.40241773803446,0.4115740113314,4.41026134156626,0,0,0.590789906681404,0.441463099414651,1.35287282397425,0.514703430895577,0.878002283269004,0,0.201057944823262,0.370353780634118,0,1.03993478527958,1.44331342025273,0.34779121492523,0.939269553886573,0.144366447761074,0.462985512576611,0.761016608938393,0.790204397959275,0.858486162094873,0,0,0,0,1.00789276919316,0.425325291727159,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0.925447434329912,0.600686115687835,0.285826432630578,0.224262168690721,1.30788020649984,0.51336800074665,0.517086863031111,0,2.535908257668,0,3.12022310734098,0.514414748524284,1.41849132023278,3.72991050622539,1.57275793023962,1.62786481617433,1.64648067356154,0.977208552881205,1.42156779497018,1.58390374586686,0.904318131178758,0,1.29964888536674,0,0,2.10833939483032,0.479249710983165,2.29723871668228,0,1.44781306667579,4.9314317412092,0.179060963239896,0.224170287987055,0,0,0,0.254094624222463,0,3.09315525111078,0.837581326671744,5.10351001322531,0,0,0,2.82190430954022,7.50255781589516,1.89885516589815,4.15941723061614,9.63516539504674,2.20783381047509,1.99140405487612,0.300946099727719,0,0,0.664225598535437,1.84369168541703,0.955719759148911,1.56640925970192,1.37257369524342,0,0.862856803274467,0,0,0,2.11673205330776,0,0.920771839728375,5.89386198309454,0.896974044789907,0.511707249066704,1.76939313257968,2.96836132889982,2.92998418225046,2.13074070375753,0.246381468041427,6.75030757938707,2.44041794765914,0.725156697549733,1.60405176242628,0.184161977871793,1.26295892981067,3.09554985611419,5.37610101333639,0,0.231046011313244,0,0,0.316654886678627,1.13733384070897,1.02056223165909,1.29549549661284,1.54227252690289,0.270946437543853,2.50844886927427,0,0.831076008928724,1.11937377361089,0,0,1.28225062558195,0,0,0.412164046590889,1.73981983154852,0.577566499444116,0.574265537996172,0.650060246036521,0,0.580024309752732,2.31072925671967,3.37708084397485,0.964856007391714,1.71872391789238,4.49551751134108,1.53407929348982,0.534192213880424,0.165284915360978,0.576570202095319,0,0.2023155617111,3.71876439437829,1.25924938732256,0.6970372701606,1.54016790088044,1.06461206063404,0,1.11194531462352,0.286249773483982,0,0.632758849437452,1.90630193923825,0.255897791311334,1.28381696410176,0.636406495851874,3.92474320099615,0.539617372749944,6.03981465419321,2.35624804691373,0.606547444719948,4.75530963519025,2.10629228119491,0.48763373908959,3.41198885483798,9.50851320810799,0.682499557039929,4.10075752665767,1.13008116620243,0.551365343546124,7.96126770289464,3.06915619677634,2.89387767133344,5.24715801637306,0.608731130888112,1.54911749049875,3.66204283291914,0.8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| |||
|short_description=p7@MAGED1 | |||
}} |
Revision as of 05:43, 23 January 2014
Short description: | p7@MAGED1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_MAGED1_5end |
Coexpression cluster: | C4875_leiomyoma_Olfactory_Hair_smallcell_medial_tenocyte_Preadipocyte |
Association with transcript: | -278bp_to_ENST00000482599_5end |
EntrezGene: | MAGED1 |
HGNC: | 6813 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 5.17e-11 | 61 |
electrically active cell | 5.17e-11 | 61 |
muscle precursor cell | 1.51e-10 | 58 |
myoblast | 1.51e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.51e-10 | 58 |
muscle cell | 6.61e-10 | 55 |
smooth muscle cell | 2.80e-09 | 43 |
smooth muscle myoblast | 2.80e-09 | 43 |
vascular associated smooth muscle cell | 5.81e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 6.37e-12 | 78 |
dense mesenchyme tissue | 8.61e-12 | 73 |
paraxial mesoderm | 3.24e-11 | 72 |
presumptive paraxial mesoderm | 3.24e-11 | 72 |
somite | 7.20e-11 | 71 |
presomitic mesoderm | 7.20e-11 | 71 |
presumptive segmental plate | 7.20e-11 | 71 |
dermomyotome | 7.20e-11 | 71 |
trunk paraxial mesoderm | 7.20e-11 | 71 |
skeletal muscle tissue | 4.39e-10 | 62 |
striated muscle tissue | 4.39e-10 | 62 |
myotome | 4.39e-10 | 62 |
muscle tissue | 4.98e-10 | 64 |
musculature | 4.98e-10 | 64 |
musculature of body | 4.98e-10 | 64 |
multilaminar epithelium | 1.87e-09 | 83 |
trunk mesenchyme | 3.99e-09 | 122 |
mesenchyme | 2.17e-08 | 160 |
entire embryonic mesenchyme | 2.17e-08 | 160 |
artery | 2.91e-07 | 42 |
arterial blood vessel | 2.91e-07 | 42 |
arterial system | 2.91e-07 | 42 |
unilaminar epithelium | 9.32e-07 | 148 |