FFCP PHASE1:Hg19::chrX:40944708..40944722,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8239 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12632 | |||
|TSSclassifier=strong | |||
|UniProt=Q93008,Q6P468,Q86X58 | |||
|association_with_transcript=-165bp_to_ENST00000324545,ENST00000378308,NM_001039590,NM_001039591,uc004dfb.2,uc004dfc.2_5end | |||
|description=CAGE_peak_4_at_USP9X_5end | |||
|id=chrX:40944708..40944722,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.92e-14!115;UBERON:0001017!9.02e-13!82;UBERON:0002780!3.51e-12!41;UBERON:0001890!3.51e-12!41;UBERON:0006240!3.51e-12!41;UBERON:0005743!3.65e-12!86;UBERON:0001893!2.76e-11!34;UBERON:0003080!3.16e-11!42;UBERON:0002020!4.34e-11!34;UBERON:0003528!4.34e-11!34;UBERON:0001049!5.79e-11!57;UBERON:0005068!5.79e-11!57;UBERON:0006241!5.79e-11!57;UBERON:0007135!5.79e-11!57;UBERON:0001869!6.22e-11!32;UBERON:0000955!8.39e-11!69;UBERON:0006238!8.39e-11!69;UBERON:0002791!8.84e-11!33;UBERON:0000073!3.84e-10!94;UBERON:0001016!3.84e-10!94;UBERON:0000956!8.40e-10!25;UBERON:0000203!8.40e-10!25;UBERON:0002619!1.28e-09!22;UBERON:0002616!1.35e-09!59;UBERON:0001950!1.15e-08!20;UBERON:0003075!8.90e-08!86;UBERON:0007284!8.90e-08!86;UBERON:0002346!6.67e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;4.24e-10;25!UBERON:0000203;4.24e-10;25!UBERON:0001869;7.48e-10;32!UBERON:0002619;9.16e-10;22!UBERON:0002791;9.88e-10;32!UBERON:0001893;1.14e-09;34!UBERON:0003528;1.29e-09;34!UBERON:0002020;1.29e-09;34!UBERON:0001950;6.36e-09;20!UBERON:0002780;7.02e-09;41!UBERON:0001890;7.02e-09;41!UBERON:0000073;2.44e-07;53!UBERON:0002616;2.44e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.68e-14,114;UBERON:0001017,7.53e-14,81;UBERON:0002780,1.53e-12,41;UBERON:0001890,1.53e-12,41;UBERON:0003080,1.53e-12,41;UBERON:0006240,1.53e-12,41;UBERON:0001049,3.37e-12,56;UBERON:0005068,3.37e-12,56;UBERON:0006241,3.37e-12,56;UBERON:0007135,3.37e-12,56;UBERON:0000073,6.57e-12,53;UBERON:0002616,6.57e-12,53;UBERON:0000955,8.33e-12,68;UBERON:0006238,8.33e-12,68;UBERON:0001893,1.29e-11,34;UBERON:0001016,1.63e-11,89;UBERON:0003528,2.06e-11,34;UBERON:0002020,2.06e-11,34;UBERON:0001869,2.99e-11,32;UBERON:0011216,8.56e-11,223;UBERON:0002791,9.02e-11,32;UBERON:0000956,4.40e-10,25;UBERON:0000203,4.40e-10,25;UBERON:0002619,6.82e-10,22;UBERON:0001950,6.61e-09,20;UBERON:0003075,2.39e-08,82;UBERON:0007284,2.39e-08,82;UBERON:0002346,2.14e-07,86;UBERON:0003056,6.18e-07,61;UBERON:0010371,9.80e-07,104 | |||
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| |||
|short_description=p4@USP9X | |||
}} |
Revision as of 05:20, 23 January 2014
Short description: | p4@USP9X |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_USP9X_5end |
Coexpression cluster: | NA |
Association with transcript: | -165bp_to_ENST00000324545, ENST00000378308, NM_001039590, NM_001039591, uc004dfb.2, uc004dfc.2_5end |
EntrezGene: | USP9X |
HGNC: | 12632 |
UniProt: | Q93008Q6P468Q86X58 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.68e-14 | 114 |
central nervous system | 7.53e-14 | 81 |
regional part of forebrain | 1.53e-12 | 41 |
forebrain | 1.53e-12 | 41 |
anterior neural tube | 1.53e-12 | 41 |
future forebrain | 1.53e-12 | 41 |
neural tube | 3.37e-12 | 56 |
neural rod | 3.37e-12 | 56 |
future spinal cord | 3.37e-12 | 56 |
neural keel | 3.37e-12 | 56 |
regional part of nervous system | 6.57e-12 | 53 |
regional part of brain | 6.57e-12 | 53 |
brain | 8.33e-12 | 68 |
future brain | 8.33e-12 | 68 |
telencephalon | 1.29e-11 | 34 |
nervous system | 1.63e-11 | 89 |
brain grey matter | 2.06e-11 | 34 |
gray matter | 2.06e-11 | 34 |
cerebral hemisphere | 2.99e-11 | 32 |
organ system subdivision | 8.56e-11 | 223 |
regional part of telencephalon | 9.02e-11 | 32 |
cerebral cortex | 4.40e-10 | 25 |
pallium | 4.40e-10 | 25 |
regional part of cerebral cortex | 6.82e-10 | 22 |
neocortex | 6.61e-09 | 20 |
neural plate | 2.39e-08 | 82 |
presumptive neural plate | 2.39e-08 | 82 |
neurectoderm | 2.14e-07 | 86 |
pre-chordal neural plate | 6.18e-07 | 61 |
ecto-epithelium | 9.80e-07 | 104 |