FFCP PHASE1:Hg19::chrX:11777758..11777795,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10943 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7370 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000478462,uc004cuy.2_5end | |||
|description=CAGE_peak_3_at_MSL3_5end | |||
|id=chrX:11777758..11777795,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.53e-33!140;CL:0000037!6.65e-33!172;CL:0000566!6.65e-33!172;CL:0002032!2.41e-30!165;CL:0000837!2.41e-30!165;CL:0000988!3.62e-30!182;CL:0002031!1.57e-27!124;CL:0000542!3.43e-26!53;CL:0000051!3.43e-26!53;CL:0000838!9.15e-26!52;CL:0002087!5.39e-25!119;CL:0000945!9.30e-14!24;CL:0000826!9.30e-14!24;CL:0000791!1.15e-11!18;CL:0000789!1.15e-11!18;CL:0002420!1.15e-11!18;CL:0002419!1.15e-11!18;CL:0000790!1.15e-11!18;CL:0000084!1.49e-11!25;CL:0000827!1.49e-11!25;CL:0000763!2.56e-09!112;CL:0000049!2.56e-09!112;CL:0000236!9.56e-09!14;CL:0000625!2.32e-08!11;CL:0000766!2.51e-08!76;CL:0002139!1.12e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.97e-16;53!CL:0000945;1.00e-14;24!CL:0000084;7.71e-13;25!CL:0000791;1.12e-12;18!CL:0000789;1.12e-12;18!CL:0002419;1.12e-12;18!CL:0002087;2.14e-09;104!CL:0000625;4.62e-09;11!CL:0000236;1.20e-08;13!CL:0002139;5.90e-08;24!CL:0000738;3.94e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.68e-34,136;CL:0000037,1.80e-33,168;CL:0000988,1.32e-31,177;CL:0002032,9.31e-31,161;CL:0000837,9.31e-31,161;CL:0002031,1.17e-28,120;CL:0000542,3.81e-28,53;CL:0000051,3.81e-28,53;CL:0000838,1.10e-27,52;CL:0002087,6.16e-26,115;CL:0000945,1.01e-14,24;CL:0000826,1.01e-14,24;CL:0000791,1.84e-12,18;CL:0000789,1.84e-12,18;CL:0002420,1.84e-12,18;CL:0002419,1.84e-12,18;CL:0000790,1.84e-12,18;CL:0000084,2.41e-12,25;CL:0000827,2.41e-12,25;CL:0000236,2.58e-09,14;CL:0000625,6.70e-09,11;CL:0000763,1.05e-08,108;CL:0000049,1.05e-08,108;CL:0000766,3.88e-08,72;CL:0002139,5.58e-08,24 | |||
|ontology_enrichment_development_v019=CL:0000051;1.97e-16;53!CL:0000790;1.12e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.20e-12!112;UBERON:0002390!1.37e-11!102;UBERON:0003061!1.37e-11!102;UBERON:0000178!3.12e-08!15;UBERON:0000179!3.12e-08!15;UBERON:0000463!3.12e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.48e-09;15!UBERON:0000179;7.48e-09;15!UBERON:0000463;7.48e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.48e-13,108;UBERON:0002390,4.78e-12,98;UBERON:0003061,4.78e-12,98;UBERON:0000178,9.23e-09,15;UBERON:0000179,9.23e-09,15;UBERON:0000463,9.23e-09,15;UBERON:0002405,2.89e-08,93 | |||
|phase1_expression=2.54349730978779,0.642301571672949,2.25527046553554,2.00146596706261,0.446961094427288,0.872338524100369,0,0.631719873426831,0.522371256399677,0.491467873003018,0.697801167972428,0.218441372130172,0,0.37129905888014,0.662794751455832,2.6893005858071,1.20538905604795,2.19093027116212,2.43966399395253,0.123121058076788,0,0.626909442956176,1.14494394852423,0.821246550437305,0.376627918784408,22.2363010726538,19.5399402890871,18.890587515283,3.14691421479123,8.06041736004147,3.71558695958582,0,0,0.739508020333575,4.8029664359787,4.40724620711007,3.52320527201817,2.21598163412751,2.20598892217156,0.217010870715852,2.68698569087909,3.56283032620878,2.31818010870768,3.19876125315042,2.26725566213286,1.69808842831471,1.85943229524548,0.822335776043652,1.23882548358041,3.74000110018796,1.2808035326455,2.12834006899727,2.06847408441971,1.29096936716765,0,3.38836211176688,0.272906150057846,1.12361742222542,4.59125838556354,1.92557416245656,1.91801137739712,5.27762080298746,2.79249120670285,1.70489900213078,1.7412554317715,0.56738522469114,0.622822248995575,0.502497330513487,2.60741459210101,2.17188844705117,4.84319602106695,2.57794345191295,3.48108626184973,3.16882929467913,2.33864729961548,1.88692780957538,2.2465726229299,2.85336096398862,4.33959084082116,3.70516566863623,4.97291692997725,4.20127553658658,5.27988733383968,8.7382177801941,7.11607403090844,4.69403244823158,11.6114836240444,16.0930683187255,13.2208974556972,11.4486450544244,5.69212969109448,5.28513470433845,2.6759125968766,5.28685314316103,2.80254281490768,2.63384084775077,4.91774425284583,4.71612915298998,5.14003747498773,7.52339229258051,9.12582346574053,4.73447805734733,3.89653456815823,15.1518221363836,4.41908861212256,6.20294904834139,11.3737622781307,6.27647466655808,7.54344215847294,6.74195408875072,5.25065033793112,8.11448640058147,5.04174314751005,8.02622484269139,2.09071047609954,10.9910062416639,8.43085085924227,7.90343124610049,10.6268270648191,12.7426165729639,9.11516835398986,13.3063286222772,7.82990619204418,9.34302261427254,17.4903017173284,14.680189626729,11.4957919568947,10.6851573909108,10.1627274397733,7.24122019413995,2.43806866313962,0.670700859703636,0.767175371061182,0.361439152384566,1.00267582127178,0.724232594804119,0.795285947051099,0.486634870302636,1.32348744029695,1.10864698731282,0.702678285545008,1.24430121722827,0,0,0.324547393654683,0.522389211897802,1.19662164466979,5.00830311041218,2.28797964312051,4.08603251462521,4.57153536943422,2.58070378531837,6.94281003215189,1.69592382577203,2.09749718104953,3.57653454522088,2.50793959844173,3.10100111003195,6.40379272836078,5.02080919147005,4.02829317109147,0.760272105718513,2.68468263302986,5.14728312484216,2.43042584364528,9.64437065468061,4.93964619777574,3.60356737546631,4.5994991239765,2.84779697870439,2.19842092716489,14.495845917967,11.6334079244498,0,0,1.39293562831038,2.1185468930115,0.860509862246441,0.354668382198357,2.80338800071154,1.06748995729705,0.74000264525148,0.933633106199299,2.15537075311501,1.63461903113459,0.454072282934794,0.576175924479999,0.468642863667593,0.936480230490962,0.570471821544449,0.149448680551801,0.352303495931295,0.647491777472526,0.280901613404497,0.61246251376468,0.859840221182376,0.619954687054593,0,1.48360157567134,0,0,0.673344455816265,0.625592599359821,1.38532057742091,0.877955241761676,0.919463387397059,0.45071417671979,2.1552114800404,0.89694817844431,1.2813443329114,0.635795703478686,1.50045548042201,1.44273540933814,0.257640540045629,1.11670113798954,1.18143432568886,1.16924406193438,0.757301322732344,1.84099797284599,1.45481451136931,0.355009592516614,1.10827308050404,0.339121184620975,1.54608682530637,0.818238361772504,0.573609190778008,0.365921118388786,0.795178609928912,0.69716365721711,1.7622379352613,0.756962552626885,0.36497735907583,0,1.28648187638577,1.38134921352481,1.85747171212792,0,1.0647612003586,0.674338760312407,1.20505514941741,1.43382164552112,0.653638332277218,1.66089433377768,1.21348177344148,1.76599318612811,0.769494313892781,1.4763109092493,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,2.20731549707325,1.22988438543114,1.02940686179115,0.329250856225877,0,1.00528972411631,0.555530670951178,0.651616610620649,0,1.44331342025273,0.811512834825538,1.76113041353732,5.19719211939866,1.38895653772983,7.80042024161853,0,0,4.92434012174795,1.63802985597466,1.78357394746474,0.93733833986777,1.84780341018745,1.55952606966625,0.716468181622786,0.581267877027924,0.383382679165211,14.7798971368783,5.45900290882001,7.25648404392702,7.78247748451592,5.55466707076072,1.26995788584338,1.52795370223311,1.17217447210047,0,1.95372236136315,2.10240140490742,1.71495859578347,0.897048674762886,0.87192013766656,1.0267360014933,0.904902010304444,0,0,1.32969058292435,0,0,1.41849132023278,0,1.71573592389777,0,0.823240336780769,1.95441710576241,1.42156779497018,0.791951872933429,2.1100756394171,2.61460037580088,0.99972991182057,0,1.50677127429638,2.10833939483032,1.67737398844108,0,1.42636905040718,1.8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| |||
|short_description=p3@MSL3 | |||
}} |
Revision as of 04:48, 23 January 2014
Short description: | p3@MSL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MSL3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000478462, uc004cuy.2_5end |
EntrezGene: | MSL3 |
HGNC: | 7370 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.68e-34 | 136 |
hematopoietic stem cell | 1.80e-33 | 168 |
hematopoietic cell | 1.32e-31 | 177 |
hematopoietic oligopotent progenitor cell | 9.31e-31 | 161 |
hematopoietic multipotent progenitor cell | 9.31e-31 | 161 |
hematopoietic lineage restricted progenitor cell | 1.17e-28 | 120 |
lymphocyte | 3.81e-28 | 53 |
common lymphoid progenitor | 3.81e-28 | 53 |
lymphoid lineage restricted progenitor cell | 1.10e-27 | 52 |
nongranular leukocyte | 6.16e-26 | 115 |
lymphocyte of B lineage | 1.01e-14 | 24 |
pro-B cell | 1.01e-14 | 24 |
mature alpha-beta T cell | 1.84e-12 | 18 |
alpha-beta T cell | 1.84e-12 | 18 |
immature T cell | 1.84e-12 | 18 |
mature T cell | 1.84e-12 | 18 |
immature alpha-beta T cell | 1.84e-12 | 18 |
T cell | 2.41e-12 | 25 |
pro-T cell | 2.41e-12 | 25 |
B cell | 2.58e-09 | 14 |
CD8-positive, alpha-beta T cell | 6.70e-09 | 11 |
myeloid cell | 1.05e-08 | 108 |
common myeloid progenitor | 1.05e-08 | 108 |
myeloid leukocyte | 3.88e-08 | 72 |
endothelial cell of vascular tree | 5.58e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.48e-13 | 108 |
hematopoietic system | 4.78e-12 | 98 |
blood island | 4.78e-12 | 98 |
blood | 9.23e-09 | 15 |
haemolymphatic fluid | 9.23e-09 | 15 |
organism substance | 9.23e-09 | 15 |
immune system | 2.89e-08 | 93 |