FFCP PHASE1:Hg19::chr9:140036560..140036574,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=2902 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4584 | |||
|TSSclassifier=strong | |||
|UniProt=Q05586 | |||
|association_with_transcript=98bp_to_U08107_5end | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_6_at_GRIN1_5end | |||
|id=chr9:140036560..140036574,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.43e-23;3!UBERON:0006601;6.97e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.25e-104!57;UBERON:0005068!1.25e-104!57;UBERON:0006241!1.25e-104!57;UBERON:0007135!1.25e-104!57;UBERON:0002616!3.17e-95!59;UBERON:0000955!3.29e-84!69;UBERON:0006238!3.29e-84!69;UBERON:0002780!1.05e-82!41;UBERON:0001890!1.05e-82!41;UBERON:0006240!1.05e-82!41;UBERON:0001017!1.54e-82!82;UBERON:0003080!1.24e-80!42;UBERON:0002020!1.38e-79!34;UBERON:0003528!1.38e-79!34;UBERON:0001893!1.43e-79!34;UBERON:0005743!1.92e-78!86;UBERON:0001869!3.42e-78!32;UBERON:0002791!1.60e-75!33;UBERON:0003075!4.09e-75!86;UBERON:0007284!4.09e-75!86;UBERON:0002346!1.76e-71!90;UBERON:0000073!1.84e-70!94;UBERON:0001016!1.84e-70!94;UBERON:0002619!6.94e-64!22;UBERON:0007023!2.60e-58!115;UBERON:0000956!5.06e-56!25;UBERON:0000203!5.06e-56!25;UBERON:0001950!1.52e-55!20;UBERON:0003056!5.66e-54!61;UBERON:0000033!1.82e-47!123;UBERON:0000153!6.07e-45!129;UBERON:0007811!6.07e-45!129;UBERON:0004121!2.21e-36!169;UBERON:0000924!2.23e-35!173;UBERON:0006601!2.23e-35!173;UBERON:0000200!3.72e-29!6;UBERON:0000025!7.81e-26!194;UBERON:0002308!1.57e-24!9;UBERON:0000125!1.57e-24!9;UBERON:0002021!1.73e-24!5;UBERON:0004733!9.70e-24!12;UBERON:0002028!9.70e-24!12;UBERON:0007277!9.70e-24!12;UBERON:0003076!1.01e-23!15;UBERON:0003057!1.01e-23!15;UBERON:0004732!8.08e-22!13;UBERON:0004111!2.51e-19!241;UBERON:0002420!1.65e-18!9;UBERON:0007245!1.65e-18!9;UBERON:0010009!1.65e-18!9;UBERON:0010011!1.65e-18!9;UBERON:0000454!1.65e-18!9;UBERON:0002680!2.05e-18!9;UBERON:0001895!2.05e-18!9;UBERON:0010092!2.05e-18!9;UBERON:0009663!8.72e-17!7;UBERON:0000477!2.73e-16!286;UBERON:0002771!8.34e-16!3;UBERON:0000483!1.70e-15!309;UBERON:0000119!2.85e-15!312;UBERON:0001871!3.14e-15!7;UBERON:0000349!3.24e-15!5;UBERON:0000064!3.36e-15!219;UBERON:0000988!3.92e-14!3;UBERON:0002298!5.75e-14!8;UBERON:0000475!5.70e-12!365;UBERON:0000369!1.67e-11!4;UBERON:0002435!1.67e-11!4;UBERON:0000204!1.67e-11!4;UBERON:0010082!1.67e-11!4;UBERON:0001870!1.64e-10!2;UBERON:0001897!1.72e-10!2;UBERON:0001954!2.51e-10!2;UBERON:0003022!2.51e-10!2;UBERON:0002421!2.51e-10!2;UBERON:0002600!2.51e-10!2;UBERON:0001875!3.66e-10!2;UBERON:0006514!3.66e-10!2;UBERON:0002148!5.83e-10!2;UBERON:0009662!5.83e-10!2;UBERON:0002360!9.24e-10!2;UBERON:0000094!9.24e-10!2;UBERON:0007645!9.24e-10!2;UBERON:0001872!2.30e-09!5;UBERON:0002037!5.40e-08!6;UBERON:0006215!5.40e-08!6;UBERON:0000481!8.56e-08!347;UBERON:0005383!1.35e-07!3;UBERON:0005382!1.35e-07!3;UBERON:0000062!1.59e-07!511;UBERON:0001896!5.55e-07!3;UBERON:0005290!5.55e-07!3;UBERON:0010096!5.55e-07!3;UBERON:0006331!6.47e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.88e-38;20!UBERON:0002619;1.02e-34;22!UBERON:0000956;1.09e-30;25!UBERON:0000203;1.09e-30;25!UBERON:0002021;3.31e-30;5!UBERON:0002791;9.17e-30;32!UBERON:0001869;9.17e-30;32!UBERON:0001893;2.15e-28;34!UBERON:0000200;1.60e-25;6!UBERON:0003528;9.39e-23;34!UBERON:0002020;9.39e-23;34!UBERON:0002780;1.81e-18;41!UBERON:0001890;1.81e-18;41!UBERON:0002581;8.01e-18;1!UBERON:0001874;8.01e-18;1!UBERON:0003112;8.01e-18;1!UBERON:0011158;8.01e-18;1!UBERON:0003128;8.01e-18;1!UBERON:0001703;8.01e-18;1!UBERON:0002241;8.01e-18;1!UBERON:0000073;6.54e-16;53!UBERON:0002616;6.54e-16;53!UBERON:0001017;1.24e-14;75!UBERON:0001872;3.59e-14;5!UBERON:0002037;5.67e-12;6!UBERON:0000955;1.49e-10;68!UBERON:0002771;8.32e-10;2!UBERON:0001897;8.32e-10;2!UBERON:0010225;8.32e-10;2!UBERON:0002702;1.38e-09;2!UBERON:0001016;1.80e-08;83!UBERON:0002680;2.75e-08;9!UBERON:0001895;2.75e-08;9!UBERON:0001870;8.38e-07;3!UBERON:0005383;8.38e-07;3!UBERON:0005382;8.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,6.65e-38,20;UBERON:0000073,3.92e-36,53;UBERON:0002616,3.92e-36,53;UBERON:0002619,1.36e-34,22;UBERON:0001049,3.38e-34,56;UBERON:0005068,3.38e-34,56;UBERON:0006241,3.38e-34,56;UBERON:0007135,3.38e-34,56;UBERON:0002791,2.37e-31,32;UBERON:0001869,2.37e-31,32;UBERON:0002780,4.02e-31,41;UBERON:0001890,4.02e-31,41;UBERON:0003080,4.02e-31,41;UBERON:0006240,4.02e-31,41;UBERON:0000956,1.40e-30,25;UBERON:0000203,1.40e-30,25;UBERON:0002021,4.71e-30,5;UBERON:0003528,1.54e-29,34;UBERON:0002020,1.54e-29,34;UBERON:0001893,1.54e-29,34;UBERON:0000955,1.01e-27,68;UBERON:0006238,1.01e-27,68;UBERON:0000200,1.41e-25,6;UBERON:0001017,2.86e-23,81;UBERON:0003075,2.86e-23,82;UBERON:0007284,2.86e-23,82;UBERON:0002346,3.63e-22,86;UBERON:0001016,6.39e-21,89;UBERON:0003056,6.60e-21,61;UBERON:0010371,3.10e-18,104;UBERON:0001874,5.26e-18,1;UBERON:0002581,8.72e-18,1;UBERON:0003112,1.03e-17,1;UBERON:0011158,1.03e-17,1;UBERON:0003128,1.03e-17,1;UBERON:0001703,1.03e-17,1;UBERON:0002241,1.03e-17,1;UBERON:0004761,1.03e-17,1;UBERON:0009617,1.03e-17,1;UBERON:0010314,4.81e-17,132;UBERON:0007023,1.04e-16,114;UBERON:0001872,4.69e-14,5;UBERON:0002037,4.30e-12,6;UBERON:0006215,4.30e-12,6;UBERON:0004121,1.17e-10,171;UBERON:0000924,1.17e-10,171;UBERON:0006601,1.17e-10,171;UBERON:0002771,7.98e-10,2;UBERON:0001897,8.69e-10,2;UBERON:0010225,8.69e-10,2;UBERON:0002702,1.22e-09,2;UBERON:0011216,1.33e-09,223;UBERON:0005253,1.57e-09,2;UBERON:0000025,1.63e-09,192;UBERON:0002680,2.29e-08,9;UBERON:0001895,2.29e-08,9;UBERON:0010092,2.29e-08,9;UBERON:0004111,2.04e-07,240;UBERON:0005383,7.28e-07,3;UBERON:0005382,7.28e-07,3;UBERON:0001870,7.70e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.964771509003264,1.52581736317083,1.3269511191747,0.591095237907095,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569797163602908,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,2.80660409274515,1.3771002377715,0.573409195690071,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,1.41696576325585,1.11743701340006,1.02558182120378,0.756215088665154,0.691572524642179,1.29180516505481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540300676947157,0,1.03343398250592,0.570742291745161,0,0,0,0,0,0,0,0,0,0,0,0,0.339848664884159,1.31545547125698,0,0,0,1.41404030924402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0,0,0,0,0,0,0,0,0,0,0,0,0,0.543931921527318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48750831837634,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@GRIN1 | |||
}} |
Revision as of 04:17, 23 January 2014
Short description: | p6@GRIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_6_at_GRIN1_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | 98bp_to_U08107_5end |
EntrezGene: | GRIN1 |
HGNC: | 4584 |
UniProt: | Q05586 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data