FFCP PHASE1:Hg19::chr9:135854058..135854072,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8328 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4238 | |||
|TSSclassifier=strong | |||
|UniProt=Q5VTD9 | |||
|association_with_transcript=-25bp_to_ENST00000450530,ENST00000534944,NM_001135031,NM_004188_5end | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_3_at_GFI1B_5end | |||
|id=chr9:135854058..135854072,+ | |||
|ontology_enrichment_celltype=CL:0000763!6.70e-17!112;CL:0000049!6.70e-17!112;CL:0000037!2.41e-15!172;CL:0000566!2.41e-15!172;CL:0000988!4.20e-14!182;CL:0002274!2.95e-13!5;CL:0000457!2.95e-13!5;CL:0002191!2.95e-13!5;CL:0000097!2.95e-13!5;CL:0000831!2.95e-13!5;CL:0002028!2.95e-13!5;CL:0002032!1.13e-12!165;CL:0000837!1.13e-12!165;CL:0000764!6.63e-10!2;CL:0000765!6.63e-10!2;CL:0000050!6.63e-10!2;CL:0000038!6.63e-10!2;CL:0000558!6.63e-10!2;CL:0000547!6.63e-10!2;CL:0000549!6.63e-10!2;CL:0000550!6.63e-10!2;CL:0000552!6.63e-10!2;CL:0000163!2.20e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.59e-18;2!CL:0000558;1.59e-18;2!CL:0000037;2.17e-09;1!CL:0001024;2.17e-09;1!CL:0000763;3.91e-09;100!CL:0000097;1.61e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.06e-27,108;CL:0000049,2.06e-27,108;CL:0000764,1.59e-18,2;CL:0000765,1.59e-18,2;CL:0000050,1.59e-18,2;CL:0000038,1.59e-18,2;CL:0000558,1.59e-18,2;CL:0000547,1.59e-18,2;CL:0000549,1.59e-18,2;CL:0000550,1.59e-18,2;CL:0000552,1.59e-18,2;CL:0000037,2.07e-18,168;CL:0002032,2.31e-17,161;CL:0000837,2.31e-17,161;CL:0000988,2.64e-17,177;CL:0001024,2.46e-09,1;CL:0000097,1.83e-07,5;CL:0002028,1.83e-07,5;CL:0000134,6.83e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000049;1.17e-07;108 | |||
|ontology_enrichment_disease=DOID:8692!3.18e-35!31;DOID:1240!4.08e-27!39;DOID:1036!1.13e-25!8;DOID:2531!9.83e-20!51;DOID:0060083!9.83e-20!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.39e-56;31!DOID:1036;3.23e-51;8!DOID:1240;5.75e-35;39!DOID:2531;2.81e-22;51!DOID:0060083;2.81e-22;51!DOID:9119;1.36e-09;1!DOID:8552;1.36e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,5.15e-58,31;DOID:1036,3.23e-51,8;DOID:1240,1.32e-45,39;DOID:2531,2.78e-34,51;DOID:0060083,2.78e-34,51;DOID:0050686,5.14e-11,137;DOID:8552,1.25e-09,1;DOID:9119,1.36e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!8.67e-09!15;UBERON:0000179!8.67e-09!15;UBERON:0000463!8.67e-09!15;UBERON:0000341!1.08e-08!2 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.0787107813136792,0,0,0,0,0,0,0,0,1.17440175733939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,3.95076127162616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.16974362447614,1.03664057770386,0.576479813667846,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.1615635939093,21.9605778860916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0.476463550915578,0,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0.997896857164083,2.48956981172077,2.11673582723883,0,0.280797178113459,0,0,0,1.35433422241283,0,0,0,0,0,0,0,0,3.34087408674291,4.92349595790849,3.51592382018778,2.66457574398256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82564461511045,2.82559859230266,3.15833924864053,4.70550082362575,4.02771808742022,5.50285824900137,10.1719410547442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,3.77625595446959,0,0,0,1.32506888912221,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,1.48253142339228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.476128862927481,0,0.186224142887574,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@GFI1B | |||
}} |
Revision as of 03:52, 23 January 2014
Short description: | p3@GFI1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GFI1B_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -25bp_to_ENST00000450530, ENST00000534944, NM_001135031, NM_004188_5end |
EntrezGene: | GFI1B |
HGNC: | 4238 |
UniProt: | Q5VTD9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.06e-27 | 108 |
common myeloid progenitor | 2.06e-27 | 108 |
erythroid lineage cell | 1.59e-18 | 2 |
erythroblast | 1.59e-18 | 2 |
megakaryocyte-erythroid progenitor cell | 1.59e-18 | 2 |
erythroid progenitor cell | 1.59e-18 | 2 |
reticulocyte | 1.59e-18 | 2 |
proerythroblast | 1.59e-18 | 2 |
basophilic erythroblast | 1.59e-18 | 2 |
polychromatophilic erythroblast | 1.59e-18 | 2 |
orthochromatic erythroblast | 1.59e-18 | 2 |
hematopoietic stem cell | 2.07e-18 | 168 |
hematopoietic oligopotent progenitor cell | 2.31e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.31e-17 | 161 |
hematopoietic cell | 2.64e-17 | 177 |
CD34-positive, CD38-negative hematopoietic stem cell | 2.46e-09 | 1 |
mast cell | 1.83e-07 | 5 |
basophil mast progenitor cell | 1.83e-07 | 5 |
mesenchymal cell | 6.83e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 5.15e-58 | 31 |
chronic leukemia | 3.23e-51 | 8 |
leukemia | 1.32e-45 | 39 |
hematologic cancer | 2.78e-34 | 51 |
immune system cancer | 2.78e-34 | 51 |
organ system cancer | 5.14e-11 | 137 |
chronic myeloid leukemia | 1.25e-09 | 1 |
acute myeloid leukemia | 1.36e-09 | 1 |