FFCP PHASE1:Hg19::chr9:98637867..98637887,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=375748 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26922 | |||
|TSSclassifier=strong | |||
|UniProt=F2Z2R4,Q5T890 | |||
|association_with_transcript=-12bp_to_ENST00000405401,NM_001010895,uc004avt.3,uc010mrx.1,uc010mry.1,uc011lum.1_5end | |||
|description=CAGE_peak_5_at_C9orf102_5end | |||
|id=chr9:98637867..98637887,+ | |||
|ontology_enrichment_celltype=CL:0002087!2.06e-14!119;CL:0002031!4.47e-14!124;CL:0000738!1.60e-13!140;CL:0000838!1.15e-12!52;CL:0000542!1.35e-12!53;CL:0000051!1.35e-12!53;CL:0000791!1.20e-11!18;CL:0000789!1.20e-11!18;CL:0002420!1.20e-11!18;CL:0002419!1.20e-11!18;CL:0000790!1.20e-11!18;CL:0000037!3.46e-11!172;CL:0000566!3.46e-11!172;CL:0000084!5.48e-11!25;CL:0000827!5.48e-11!25;CL:0000988!5.05e-10!182;CL:0002032!1.75e-09!165;CL:0000837!1.75e-09!165;CL:0000625!1.61e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.87e-29;18!CL:0000789;6.87e-29;18!CL:0002419;6.87e-29;18!CL:0000084;5.72e-23;25!CL:0000625;6.67e-21;11!CL:0000624;1.60e-11;6!CL:0000542;1.05e-10;53!CL:0000898;3.61e-09;3!CL:0000815;8.67e-07;2!CL:0000792;8.67e-07;2!CL:0002677;8.67e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.58e-29,18;CL:0000789,1.58e-29,18;CL:0002420,1.58e-29,18;CL:0002419,1.58e-29,18;CL:0000790,1.58e-29,18;CL:0000084,2.05e-23,25;CL:0000827,2.05e-23,25;CL:0000625,8.84e-21,11;CL:0000838,3.91e-19,52;CL:0000542,1.15e-18,53;CL:0000051,1.15e-18,53;CL:0000624,2.55e-12,6;CL:0000898,9.53e-10,3;CL:0002087,6.63e-09,115;CL:0000738,3.57e-08,136;CL:0000815,4.61e-07,2;CL:0000792,4.61e-07,2;CL:0002677,4.61e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;6.87e-29;18!CL:0000051;1.05e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.82e-15!115;UBERON:0002193!2.86e-08!112;UBERON:0002390!3.32e-07!102;UBERON:0003061!3.32e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.51e-07;2!UBERON:0005058;2.51e-07;2!UBERON:0009113;2.51e-07;2!UBERON:0000341;8.67e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.40e-07,4;UBERON:0005058,1.40e-07,4;UBERON:0009113,1.40e-07,4;UBERON:0003295,1.40e-07,4;UBERON:0005562,1.40e-07,4;UBERON:0000974,3.11e-07,10 | |||
|phase1_expression=0,0.856402095563933,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0.247532705920093,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0,0.125542639594803,0.61130724598361,0.492603536699674,0.157421562627358,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,0.542270404062111,0.142169232487422,0.880801318004542,0,0.802177789880567,0.651032612147555,0.671746422719773,0.971680998056939,0.77272670290256,0,0,0.242584061187816,0.464858073811369,0,0.309706370895104,0,0.256160706529101,0.236482229888585,0.344745680736619,0.645484683583826,0,0.188242339542605,0.272906150057846,0.224723484445085,0.306083892370903,0.641858054152187,0.639337125799041,0,0.598390972864896,0.426224750532694,0.580418477257168,0,0,0,0.521482918420201,0.434377689410233,0,1.47311054395026,0.316462387440884,0.211255286311942,0,0.419317291016752,0.561643155732475,0.300353785683013,0.32145117339416,0.285012743741249,0.19891667719909,0.547992461293902,0,0,0,0.853460445133014,1.20118796110804,0.574752439954483,0.661044872784862,0.954053754535364,1.70763890732835,1.17447437874188,1.52909291250092,0,0.560508562981536,0.790152254325231,1.57367816091066,1.57204305099666,0.616804496998528,1.67186495390678,2.28145586643513,3.31413464014313,3.89653456815823,0.557052284425868,1.76763544484902,0.664601683750863,0.270803863765016,0.640456598628376,1.04047478047903,0.657751618414705,1.10540007114339,1.44901542867526,2.96573126324121,4.28065324943541,3.1360657141493,1.58633079776593,1.91610246800961,1.37450978193052,3.03623630423403,2.22995790026868,4.55758417699493,0.950452044448374,2.25862678616659,2.04778577847069,1.24930726552346,3.55165878066025,2.46338399076314,2.01606743224732,0.534880391567015,1.30341963494519,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.144846518960824,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.087834785693126,0.392937226493138,0,0,0.324547393654683,0.348259474598534,0.26591592103773,0.476981248610684,0,1.48583000531826,0,0,0,0.56530794192401,0.419499436209906,0,0.208994966536811,1.29208379584664,0.35576626268671,0.66944122552934,0.805658634218294,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0.496971951695318,0.25326102332916,0.264818361626438,1.14734648299525,0,0,0,0,0,0.269421344139376,0.163461903113459,0.151357427644931,0,0,0,0,0,0.117434498643765,0.161872944368132,0.280901613404497,0.408308342509787,0.245668634623536,0.826606249406124,0,0,0.910161361938026,0,0.168336113954066,0,0,0,0,0.45071417671979,0.453728732640084,0.179389635688862,0.213557388818567,0.423863802319124,0.300091096084402,0,0,0,0.168776332241266,0.0974370051611986,0.504867548488229,0,0.484938170456436,0,0.302256294682921,0.169560592310488,0.193260853163297,0,0,0,0.132529768321485,0,0,0,0,1.56449532329816,0.643240938192885,0,0,0,0.118306800039844,0.337169380156203,0,0.110293972732394,0.217879444092406,0,0,0.588664395376038,0,0,0,0,0,0,0.982827216677626,1.18157981336281,1.32438929824395,0,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0.790204397959275,0.858486162094873,0.492434012174795,0.234004265139238,0.445893486866185,0,0,0,0.0895585227028483,0,0,0.985326475791887,0.528290604079356,0.414656231081544,0.288239906833923,0.25248486685276,0.190493682876507,0.381988425558278,1.17217447210047,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0.301439377059586,0,0,0,1.00451418286425,0,0,0,0,0.289562613335158,0,0,0.112085143993527,0.788123040807709,1.07813787429759,1.15508732651774,0,1.30139853857622,0,0,0,0,0,0.828831026872071,0,0,1.08506009479894,0.207970861530807,0.178428988797162,0.157702415033935,0.234282829985426,0,0,0,0,0,0.260650843404249,0,0,1.44737618286021,0.647142602455851,1.38745825144478,0.303127571446259,0,0.30239029332968,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0.40101294060657,0.184161977871793,0,0,0,0,0,1.56869953835371,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0.509752546090077,0,0,0.657779629937804,0.522870902049801,0,0,0.325378394664303,1.03041011647722,0.0915694648183434,0.330037999682352,0,0,0,0.193341436584244,0,0.307007349452259,0,0.107420244868274,0,0.0852266274161009,0.267096106940212,0,0,0.127612712494584,0.10115778085555,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0.744316738719335,0,0.38126038784765,0,0.42793898803392,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0.211107635297664,0.987884678879706,0,0,0,0,0,0.659006605437454,0,0,0,0,1.01489521846434,0,0.569647187174163,0.952927101831156,1.23408681925858,1.29694662238543,1.08006287447623,0.79312517629427,0,0,0,0.185803175125719,0.28853842595289,0.711418433484141,0,0.199579371432817,0,0,0,0,0.228234679033192,0.313359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| |||
|short_description=p5@C9orf102 | |||
}} |
Revision as of 02:18, 23 January 2014
Short description: | p5@C9orf102 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_C9orf102_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000405401, NM_001010895, uc004avt.3, uc010mrx.1, uc010mry.1, uc011lum.1_5end |
EntrezGene: | C9orf102 |
HGNC: | 26922 |
UniProt: | F2Z2R4Q5T890 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.58e-29 | 18 |
alpha-beta T cell | 1.58e-29 | 18 |
immature T cell | 1.58e-29 | 18 |
mature T cell | 1.58e-29 | 18 |
immature alpha-beta T cell | 1.58e-29 | 18 |
T cell | 2.05e-23 | 25 |
pro-T cell | 2.05e-23 | 25 |
CD8-positive, alpha-beta T cell | 8.84e-21 | 11 |
lymphoid lineage restricted progenitor cell | 3.91e-19 | 52 |
lymphocyte | 1.15e-18 | 53 |
common lymphoid progenitor | 1.15e-18 | 53 |
CD4-positive, alpha-beta T cell | 2.55e-12 | 6 |
naive T cell | 9.53e-10 | 3 |
nongranular leukocyte | 6.63e-09 | 115 |
leukocyte | 3.57e-08 | 136 |
regulatory T cell | 4.61e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.61e-07 | 2 |
naive regulatory T cell | 4.61e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.40e-07 | 4 |
hemolymphoid system gland | 1.40e-07 | 4 |
thymic region | 1.40e-07 | 4 |
pharyngeal gland | 1.40e-07 | 4 |
thymus primordium | 1.40e-07 | 4 |
neck | 3.11e-07 | 10 |