FFCP PHASE1:Hg19::chr9:88969339..88969422,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79670 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25817 | |||
|TSSclassifier=strong | |||
|UniProt=Q5VYS8,Q96KX5 | |||
|association_with_transcript=0bp_to_ENST00000375960,ENST00000375961,NM_001185059,NM_001185074,NM_024617,uc004aoq.2,uc004aor.2,uc004aos.2,uc004aot.2,uc004aou.2,uc004aov.2,uc004aow.2,uc010mqf.1_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_ZCCHC6_5end | |||
|id=chr9:88969339..88969422,- | |||
|ontology_enrichment_celltype=CL:0000738!6.84e-41!140;CL:0002031!2.40e-35!124;CL:0002087!9.62e-33!119;CL:0000766!2.22e-30!76;CL:0000037!8.36e-30!172;CL:0000566!8.36e-30!172;CL:0002032!2.01e-28!165;CL:0000837!2.01e-28!165;CL:0000557!1.72e-26!71;CL:0000839!2.80e-26!70;CL:0002057!3.39e-26!42;CL:0000860!7.74e-25!45;CL:0002009!3.31e-24!65;CL:0000988!7.68e-24!182;CL:0002194!1.77e-23!63;CL:0000576!1.77e-23!63;CL:0000040!1.77e-23!63;CL:0000559!1.77e-23!63;CL:0000763!5.03e-19!112;CL:0000049!5.03e-19!112;CL:0000838!3.79e-09!52;CL:0000791!6.60e-09!18;CL:0000789!6.60e-09!18;CL:0002420!6.60e-09!18;CL:0002419!6.60e-09!18;CL:0000790!6.60e-09!18;CL:0000542!7.23e-09!53;CL:0000051!7.23e-09!53 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.80e-20;33!CL:0002057;8.80e-20;33!CL:0000576;8.62e-17;48!CL:0000473;2.13e-16;39!CL:0000234;2.13e-16;39!CL:0000766;5.05e-14;69!CL:0002087;4.13e-11;104!CL:0000738;3.97e-09;136!CL:0000791;5.85e-09;18!CL:0000789;5.85e-09;18!CL:0002419;5.85e-09;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.93e-41,136;CL:0002031,6.62e-36,120;CL:0002087,2.78e-33,115;CL:0000766,2.30e-31,72;CL:0000037,5.15e-30,168;CL:0002032,1.22e-28,161;CL:0000837,1.22e-28,161;CL:0000557,2.12e-27,67;CL:0000839,3.39e-27,66;CL:0000860,3.38e-26,42;CL:0002057,3.38e-26,42;CL:0000473,1.76e-25,48;CL:0000234,1.76e-25,48;CL:0002009,4.02e-25,61;CL:0000988,1.15e-24,177;CL:0002194,2.14e-24,59;CL:0000576,2.14e-24,59;CL:0000040,2.14e-24,59;CL:0000559,2.14e-24,59;CL:0000763,2.74e-19,108;CL:0000049,2.74e-19,108;CL:0000838,3.79e-09,52;CL:0000791,6.60e-09,18;CL:0000789,6.60e-09,18;CL:0002420,6.60e-09,18;CL:0002419,6.60e-09,18;CL:0000790,6.60e-09,18;CL:0000542,7.23e-09,53;CL:0000051,7.23e-09,53;CL:0000134,5.86e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;4.07e-19;42!CL:0000790;5.85e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.19e-29!102;UBERON:0003061!6.19e-29!102;UBERON:0002193!2.73e-24!112;UBERON:0002371!1.79e-22!80;UBERON:0001474!1.85e-20!86;UBERON:0007023!2.71e-17!115;UBERON:0004765!9.90e-17!101;UBERON:0001434!9.90e-17!101;UBERON:0002405!1.06e-15!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.52e-29,98;UBERON:0003061,1.52e-29,98;UBERON:0002193,1.07e-24,108;UBERON:0002371,4.21e-23,76;UBERON:0001474,5.93e-21,82;UBERON:0002405,4.24e-20,93;UBERON:0007023,4.86e-17,114;UBERON:0004765,6.19e-17,90;UBERON:0001434,1.43e-15,100 | |||
|phase1_expression=4.1786027232228,5.1384125733836,6.62485699251064,5.00366491765652,4.02264984984559,3.48935409640147,5.06599756336621,5.05375898741465,3.91778442299758,0.245733936501509,0.697801167972428,3.27662058195258,2.11013582582763,3.21792517696121,2.31978163009541,5.3786011716142,6.02694528023977,3.65155045193687,8.29485757943862,0.861847406537515,1.83600622119828,0.940364164434263,4.57977579409691,3.69560947696787,3.51519390865448,13.6015862231353,10.5088754495931,12.5937250101887,49.170534606113,58.3420685107763,22.1387056341989,0,2.409647350226,1.47901604066715,3.09868802321207,5.2602616020346,5.87200878669694,25.4837887924664,39.5072561516179,28.6454349344924,28.2133497542305,35.9521969281067,35.0302771982494,48.7084099911542,43.8336094679019,57.7350065627002,58.1072592264212,67.4315336355794,75.8780608693004,66.4569426264168,58.9169625016931,63.850202069918,84.8074374612082,85.203978233065,83.9644216884919,49.507735299705,53.2166992612799,52.5852953601498,63.0532818284059,90.8229146625345,70.9664209636936,50.7971002287543,46.6744958834619,49.4420710617925,76.3250297593176,93.0511768493469,93.4233373493363,87.1832868440899,65.1853648025252,86.2239713479313,43.5887641896025,93.1742419048539,90.1917804206521,38.4484621087734,31.2528320948614,27.6749412071056,24.1506556964964,23.427595283275,49.8249318760948,40.1867968675161,34.4125851554426,38.7248005981024,24.6394742245852,26.2146533405823,24.016749854316,27.737464466823,30.830491001773,33.9103939573145,21.1534359291156,26.7135051269902,38.7064818994425,38.170417309111,30.5818582500183,3.96513985737078,22.4203425192614,5.53106578027662,31.4735632182133,25.5456995786957,30.0178188539283,14.8795980897704,18.5775691981147,19.8848078408588,11.6896037044747,21.5022181788385,22.9792607830373,22.1533894583621,36.0169138807471,15.4990496868067,15.2169436645058,11.0173396084463,10.7776506936481,12.1717296008722,19.4255397742299,21.6708070752668,22.9978152370949,18.9226602304936,25.2925525777268,20.6176467289578,37.9529538029254,27.3966256318723,27.3455050619696,22.810849066761,32.8253759589545,34.4283984005385,24.9861453104692,30.0707110095901,28.7394798922366,30.0394047404851,37.976507801258,24.6201486600758,26.8187552945358,0.670700859703636,1.40648818027883,3.61439152384566,3.50936537445123,2.89693037921647,6.36228757640879,3.89307896242109,4.25406677238305,3.32594096193846,4.0404001418838,6.48346423713678,0.364295288292542,1.11235332835329,12.6573483525327,13.7562492466421,12.3650903282545,10.2550968451297,8.00792875092179,11.5151825412165,1.59009925893364,1.72046919021225,0.694281003215189,1.69592382577203,1.25849830862972,1.10047216776027,0.835979866147242,4.13466814670926,6.75955899104749,5.02080919147005,2.01414658554573,4.56163263431108,2.19655851793353,2.20597848207521,3.24056779152704,4.01848777278359,5.61323431565425,5.51796254368279,0,0.949265659568129,2.01521918323448,349.218106205568,341.246632450526,0.872188104285069,7.45457927542978,1.77282716330412,20.5234230260489,6.88407889797153,3.54668382198357,2.80338800071154,0,2.4666754841716,8.71390899119346,4.44545217829971,3.75962377160955,3.78393569112329,4.60940739583999,0.70296429550139,12.7985631500431,1.71141546463335,8.66802347200446,3.64046945795671,6.151171885989,7.16299114181467,13.0658669603132,3.80786383666481,12.1924421787403,8.31602000097437,5.93440630268536,1.82032272387605,2.15585442544872,4.54507507675979,6.25592599359821,16.0697186980826,4.82875382968922,7.66219489497549,9.01428353439581,1.58805056424029,10.2252092342651,5.33893472046419,5.29829752898905,7.50227740211006,5.77094163735258,15.7160729427834,5.76962254627928,8.77636927654584,5.26159827870473,6.81571190459109,5.79914361446486,4.52608959092673,9.58525899794859,3.02256294682921,2.54340888465731,10.2428252176547,7.36414525595254,11.7589884109492,1.58565817968474,3.44577397635862,2.5562667431294,3.62813692553797,2.27088765788066,4.01475094983413,7.8224766164908,8.36213219650751,0,10.6804623447355,10.8281922250438,3.19428360107579,2.52877035117153,2.41011029883482,3.74999507290139,3.26819166138609,2.37270619111097,4.04493924480493,2.74710051175484,3.46272441251751,0.738155454624648,2.80483547606892,1.2347220339942,2.94017422771084,7.60530208930985,7.86261773342101,8.27105869353966,6.18048339180511,3.56666471775029,4.11762744716461,3.95101027471052,0,3.61904300681871,5.46271826435325,1.3032332212413,2.07986957055916,1.44331342025273,4.40535538905292,3.75707821554629,1.58803092537181,1.85194205030644,2.85381228351897,4.74122638775565,3.43394464837949,14.280586353069,12.6362303175188,17.5384771500699,4.68669169933885,6.88726725615324,4.11147782002921,3.85101647622248,4.06887513919547,1.91691339582606,100.995963768668,10.8299573836268,18.2448741675879,20.4650333852085,18.936365013957,2.22242630022592,1.52795370223311,2.34434894420094,3.4214489204541,2.67351481028641,1.8020583470635,3.71574362419752,2.35475277125258,1.74384027533312,3.44689943358465,4.65378176728,3.57656445851882,4.22651376278,4.5209479819428,9.3606693220229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| |||
|short_description=p2@ZCCHC6 | |||
}} |
Revision as of 01:59, 23 January 2014
Short description: | p2@ZCCHC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZCCHC6_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000375960, ENST00000375961, NM_001185059, NM_001185074, NM_024617, uc004aoq.2, uc004aor.2, uc004aos.2, uc004aot.2, uc004aou.2, uc004aov.2, uc004aow.2, uc010mqf.1_5end |
EntrezGene: | ZCCHC6 |
HGNC: | 25817 |
UniProt: | Q5VYS8Q96KX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.52e-29 | 98 |
blood island | 1.52e-29 | 98 |
hemolymphoid system | 1.07e-24 | 108 |
bone marrow | 4.21e-23 | 76 |
bone element | 5.93e-21 | 82 |
immune system | 4.24e-20 | 93 |
adult organism | 4.86e-17 | 114 |
skeletal element | 6.19e-17 | 90 |
skeletal system | 1.43e-15 | 100 |