FFCP PHASE1:Hg19::chr9:74764317..74764339,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9615 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4212 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y2T3,E9PBR2,Q5SZC6 | |||
|association_with_transcript=24bp_to_ENST00000238018,ENST00000376989,uc004aiq.2,uc004air.2,uc004ais.2,uc010mow.1,uc011lsf.1_5end | |||
|coexpression_cluster_id=C2946 | |||
|description=CAGE_peak_2_at_GDA_5end | |||
|id=chr9:74764317..74764339,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.05e-09;29 | |||
|ontology_enrichment_disease=DOID:305!4.90e-13!106;DOID:299!1.80e-11!25;DOID:0050687!2.64e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:299;7.26e-13;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.88e-22,106;DOID:0050687,3.53e-13,143;DOID:299,6.62e-13,25 | |||
|ontology_enrichment_uberon=UBERON:0001893!5.36e-26!34;UBERON:0002780!2.71e-25!41;UBERON:0001890!2.71e-25!41;UBERON:0006240!2.71e-25!41;UBERON:0002020!4.14e-25!34;UBERON:0003528!4.14e-25!34;UBERON:0002791!5.97e-25!33;UBERON:0001869!8.31e-25!32;UBERON:0002619!9.78e-25!22;UBERON:0003080!2.29e-24!42;UBERON:0001950!1.56e-22!20;UBERON:0007023!2.52e-21!115;UBERON:0000956!1.02e-20!25;UBERON:0000203!1.02e-20!25;UBERON:0001049!2.18e-19!57;UBERON:0005068!2.18e-19!57;UBERON:0006241!2.18e-19!57;UBERON:0007135!2.18e-19!57;UBERON:0002616!3.67e-19!59;UBERON:0000955!2.92e-17!69;UBERON:0006238!2.92e-17!69;UBERON:0003056!4.80e-17!61;UBERON:0000062!8.23e-17!511;UBERON:0005743!5.43e-14!86;UBERON:0001017!5.76e-14!82;UBERON:0000073!7.25e-14!94;UBERON:0001016!7.25e-14!94;UBERON:0002346!8.51e-14!90;UBERON:0003075!1.22e-13!86;UBERON:0007284!1.22e-13!86;UBERON:0000064!3.62e-11!219;UBERON:0000923!1.06e-10!604;UBERON:0005291!1.06e-10!604;UBERON:0006598!1.06e-10!604;UBERON:0002532!1.06e-10!604;UBERON:0002050!1.34e-10!605;UBERON:0005423!1.34e-10!605;UBERON:0004921!1.85e-10!129;UBERON:0004185!1.85e-10!129;UBERON:0005409!2.59e-10!35;UBERON:0000922!2.86e-10!612;UBERON:0000160!3.05e-10!27;UBERON:0000467!3.54e-10!625;UBERON:0000480!4.46e-10!626;UBERON:0000468!9.04e-10!659;UBERON:0000481!1.26e-09!347;UBERON:0001871!1.52e-09!7;UBERON:0001737!3.15e-09!9;UBERON:0002108!6.79e-09!14;UBERON:0001007!1.30e-08!155;UBERON:0001555!1.30e-08!155;UBERON:0007026!1.30e-08!155;UBERON:0004119!1.49e-08!169;UBERON:0000925!1.49e-08!169;UBERON:0006595!1.49e-08!169;UBERON:0000153!5.30e-08!129;UBERON:0007811!5.30e-08!129;UBERON:0000033!9.06e-08!123;UBERON:0000200!1.07e-07!6;UBERON:0000077!1.33e-07!130;UBERON:0002114!2.49e-07!12;UBERON:0002420!3.65e-07!9;UBERON:0007245!3.65e-07!9;UBERON:0010009!3.65e-07!9;UBERON:0010011!3.65e-07!9;UBERON:0000454!3.65e-07!9;UBERON:0001041!4.17e-07!98;UBERON:0000349!4.94e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.49e-43;22!UBERON:0001950;2.43e-39;20!UBERON:0000956;1.97e-37;25!UBERON:0000203;1.97e-37;25!UBERON:0001869;6.42e-36;32!UBERON:0001893;1.65e-34;34!UBERON:0002791;2.47e-33;32!UBERON:0003528;3.27e-30;34!UBERON:0002020;3.27e-30;34!UBERON:0002780;2.87e-23;41!UBERON:0001890;2.87e-23;41!UBERON:0001737;2.21e-15;9!UBERON:0001557;2.21e-15;9!UBERON:0000073;2.06e-14;53!UBERON:0002616;2.06e-14;53!UBERON:0001871;4.61e-14;6!UBERON:0000200;1.28e-12;6!UBERON:0000349;2.05e-11;5!UBERON:0001872;1.57e-10;5!UBERON:0002021;1.95e-10;5!UBERON:0000955;4.09e-10;68!UBERON:0001017;9.93e-10;75!UBERON:0002108;3.69e-09;4!UBERON:0002075;7.44e-09;18!UBERON:0005409;2.45e-07;22!UBERON:0001870;3.19e-07;3!UBERON:0001264;7.80e-07;10!UBERON:0001016;8.43e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.19e-43,22;UBERON:0001869,2.67e-40,32;UBERON:0001893,4.66e-40,34;UBERON:0001950,2.13e-39,20;UBERON:0000956,1.76e-37,25;UBERON:0000203,1.76e-37,25;UBERON:0002791,5.29e-37,32;UBERON:0003528,2.19e-34,34;UBERON:0002020,2.19e-34,34;UBERON:0002780,8.17e-32,41;UBERON:0001890,8.17e-32,41;UBERON:0003080,8.17e-32,41;UBERON:0006240,8.17e-32,41;UBERON:0000073,2.42e-24,53;UBERON:0002616,2.42e-24,53;UBERON:0001049,1.41e-22,56;UBERON:0005068,1.41e-22,56;UBERON:0006241,1.41e-22,56;UBERON:0007135,1.41e-22,56;UBERON:0000955,3.73e-21,68;UBERON:0006238,3.73e-21,68;UBERON:0011216,6.93e-20,223;UBERON:0003056,1.20e-18,61;UBERON:0001017,9.93e-18,81;UBERON:0001737,2.33e-15,9;UBERON:0001016,4.94e-15,89;UBERON:0001871,4.27e-14,6;UBERON:0003075,9.32e-13,82;UBERON:0007284,9.32e-13,82;UBERON:0000200,1.31e-12,6;UBERON:0007023,7.61e-12,114;UBERON:0002346,8.62e-12,86;UBERON:0000349,2.03e-11,5;UBERON:0001872,1.29e-10,5;UBERON:0002021,2.19e-10,5;UBERON:0002108,3.11e-09,4;UBERON:0002075,7.38e-09,18;UBERON:0010371,2.01e-08,104;UBERON:0000025,3.29e-08,192;UBERON:0001870,3.33e-07,3;UBERON:0001007,3.98e-07,145;UBERON:0001555,3.98e-07,145;UBERON:0007026,3.98e-07,145;UBERON:0004921,4.11e-07,118;UBERON:0010314,6.22e-07,132;UBERON:0001264,7.52e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0.553995408531877,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0,0.256160706529101,0,0.689491361473237,0,0,0,0.272906150057846,0.449446968890169,0,0,0,0,0,0,0,0,0,0.502497330513487,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0,0,0,0.0945348171640679,0,0,1.83370705696798,0.364295288292542,0.370784442784429,0.649094787309367,0.522389211897802,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0.168776332241266,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02243120135469,2.86593973132773,4.57920956778616,3.97058301836618,5.01122721412534,4.03360052488864,3.23595139584395,3.13954344200554,3.46272441251751,0,0,0,0,6.33775174109154,0,4.13552934676983,0,0.737930631258681,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0,0.148631162288728,0,0.16798212819886,0,0,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0.164254312027618,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,2.03901018436031,2.49322802678617,0,0,0,0,0.328014645699706,0,2.26690225624989,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0.842516912477962,0.48763373908959,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,2.07116361708914,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6557641036396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36852972734796,0.146508179271894,0,0,0,0,0,0,15.9063623642608,13.2229251425882,0,0,0,0,0.828851746593443,0,0,0,0,4.22381250392436,0.179021174675609,0,0.295930216910801,0,0,6.78532922266653,11.7815484665551,1.99613798001194,0,0,0,2.04828206913899,0,2.12748913591143,0,0,0,0,12.5420296170424,0,0,0,16.234519389394,4.35753854075961,8.08657716815899,0.0769502585037971,0,0,0,0,1.27600463892768,0.0915975934018623,0.533034776018635,0,0,0,0,0,0.167821586975843,0,0,0.210998064528027,5.54991547741102,0.141353071433941,0,0,1.68069372556344,4.888241159469,0,0,0,1.01101699471016,0,0.702793337176017,0,2.34797542718508,0,1.97292201424695,3.62972148145992,3.67287313956588,0.252746318513952,0,0,6.64653872707185,8.93678280863847,7.53439004177341,8.36307008410712,2.27687636823834,0,6.76882979507011,2.25382514053069,0,0.17472666824203,0,4.35403490800883,5.26243083020536,4.51635013792651,0.0969890164884194,0,0.225980740780532,0,0.397429223405979,13.7384427224257,5.08433595110488,1.60317640503067,3.20179492109029,8.99143243119586,0.144090417154106,0,0,0,0.621262677827163,1.17847017308398,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,1.57483970423598,0,22.2664313146605,9.53423842781029,0,0,0,0,0,13.9116484746876,8.05043250238239,2.60058834087354,0.209818352539992,0,14.1636998072947,5.56554072226391,0,0,0,0,0,0,0,0,0,0.226624183040251,1.31897010310274,0,0.129282956361551,0.52893040697076,1.02652102730598,3.52407511158336,0.106787412567695,0,0,0.496166021811951,0,0,3.19170628885091,1.08803560673895,0,0.919036730290385,0.327872630709804,0,7.08854543973589,12.8127578147061,8.51298328804199,0,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,6.22162962682788,0,0,0,0,1.47463745252232,5.70542733068293,0,0,0,0,0,0.279759015438889,0,0,0,0.157265941855896,0,0,0.425149840203366,0,0,0.318004350653419,0,0,0,0,9.69861298956539,15.5866233958143,3.19267718114303,14.1530291326121,5.29350562065608,5.25595118728056,18.408223602031,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0.781514011233092,0,7.36973628795435,3.10497781055795,10.265712861996,16.4026400708908,8.68084545304973,7.86356046404445,3.82882366312754,0,0,0.351742488719241,4.47168496738583,0,0,0,0.455324382702595,2.57236873471653,0,0,1.08751572762931,7.95850560110474,0,0,0.235479278551542,21.5248358184923,7.00680408284473,2.73947616152849,2.37520350340484,0,0.142953088353313,0,0,0,0,0,0,0,0,0.473328002922261,0.255640214277473,0.423387050190929,1.60374807980835,2.48165108531456,0.955538938977433,1.4541206133713,1.27595303699816,0.609589624911347,0,0.307988420568741,0,0.485710993059139,0,0,0,0,0,0,4.24457869593696,2.84127428655144,0,0,0,0,0,0,0,0,0,0,2.1426472632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| |||
|short_description=p2@GDA | |||
}} |
Revision as of 01:42, 23 January 2014
Short description: | p2@GDA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GDA_5end |
Coexpression cluster: | C2946_large_tubular_gastric_papillary_embryonic_small_cervical |
Association with transcript: | 24bp_to_ENST00000238018, ENST00000376989, uc004aiq.2, uc004air.2, uc004ais.2, uc010mow.1, uc011lsf.1_5end |
EntrezGene: | GDA |
HGNC: | 4212 |
UniProt: | Q9Y2T3E9PBR2Q5SZC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.88e-22 | 106 |
cell type cancer | 3.53e-13 | 143 |
adenocarcinoma | 6.62e-13 | 25 |