FFCP PHASE1:Hg19::chr9:4792987..4793004,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10171 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17687 | |||
|TSSclassifier=strong | |||
|UniProt=Q5VZU3 | |||
|association_with_transcript=7bp_to_ENST00000442869_5end | |||
|description=CAGE_peak_2_at_RCL1_5end | |||
|id=chr9:4792987..4793004,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.88e-20!115;UBERON:0005743!2.59e-11!86;UBERON:0001017!9.19e-11!82;UBERON:0001049!1.14e-10!57;UBERON:0005068!1.14e-10!57;UBERON:0006241!1.14e-10!57;UBERON:0007135!1.14e-10!57;UBERON:0000073!3.41e-09!94;UBERON:0001016!3.41e-09!94;UBERON:0002616!5.39e-09!59;UBERON:0003080!6.13e-09!42;UBERON:0002780!1.82e-08!41;UBERON:0001890!1.82e-08!41;UBERON:0006240!1.82e-08!41;UBERON:0003075!2.20e-08!86;UBERON:0007284!2.20e-08!86;UBERON:0000955!4.54e-08!69;UBERON:0006238!4.54e-08!69;UBERON:0002346!1.11e-07!90;UBERON:0002020!6.28e-07!34;UBERON:0003528!6.28e-07!34;UBERON:0001893!7.47e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.40e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.46e-23,114;UBERON:0001049,1.33e-11,56;UBERON:0005068,1.33e-11,56;UBERON:0006241,1.33e-11,56;UBERON:0007135,1.33e-11,56;UBERON:0001017,1.85e-11,81;UBERON:0000073,3.18e-10,53;UBERON:0002616,3.18e-10,53;UBERON:0001016,3.55e-09,89;UBERON:0003075,5.43e-09,82;UBERON:0007284,5.43e-09,82;UBERON:0002780,1.09e-08,41;UBERON:0001890,1.09e-08,41;UBERON:0003080,1.09e-08,41;UBERON:0006240,1.09e-08,41;UBERON:0000955,5.88e-08,68;UBERON:0006238,5.88e-08,68;UBERON:0002346,7.03e-08,86;UBERON:0003528,5.38e-07,34;UBERON:0002020,5.38e-07,34;UBERON:0001893,6.57e-07,34 | |||
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| |||
|short_description=p2@RCL1 | |||
}} |
Revision as of 00:40, 23 January 2014
Short description: | p2@RCL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RCL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_ENST00000442869_5end |
EntrezGene: | RCL1 |
HGNC: | 17687 |
UniProt: | Q5VZU3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 6.46e-23 | 114 |
neural tube | 1.33e-11 | 56 |
neural rod | 1.33e-11 | 56 |
future spinal cord | 1.33e-11 | 56 |
neural keel | 1.33e-11 | 56 |
central nervous system | 1.85e-11 | 81 |
regional part of nervous system | 3.18e-10 | 53 |
regional part of brain | 3.18e-10 | 53 |
nervous system | 3.55e-09 | 89 |
neural plate | 5.43e-09 | 82 |
presumptive neural plate | 5.43e-09 | 82 |
regional part of forebrain | 1.09e-08 | 41 |
forebrain | 1.09e-08 | 41 |
anterior neural tube | 1.09e-08 | 41 |
future forebrain | 1.09e-08 | 41 |
brain | 5.88e-08 | 68 |
future brain | 5.88e-08 | 68 |
neurectoderm | 7.03e-08 | 86 |
brain grey matter | 5.38e-07 | 34 |
gray matter | 5.38e-07 | 34 |
telencephalon | 6.57e-07 | 34 |