FFCP PHASE1:Hg19::chr8:141467799..141467810,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83696 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30832 | |||
|TSSclassifier=strong | |||
|UniProt=Q96Q05 | |||
|association_with_transcript=50bp_to_ENST00000389327,ENST00000438773,NM_001160372,uc003yvj.2_5end | |||
|description=CAGE_peak_3_at_TRAPPC9_5end | |||
|id=chr8:141467799..141467810,- | |||
|ontology_enrichment_celltype=CL:0000763!8.95e-15!112;CL:0000049!8.95e-15!112;CL:0000037!5.44e-12!172;CL:0000566!5.44e-12!172;CL:0002032!1.28e-11!165;CL:0000837!1.28e-11!165;CL:0000988!1.09e-10!182;CL:0000860!4.39e-10!45;CL:0002057!2.44e-09!42;CL:0000766!6.68e-09!76;CL:0000557!3.98e-08!71;CL:0000738!4.97e-08!140;CL:0000839!6.07e-07!70 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,4.08e-18,108;CL:0000049,4.08e-18,108;CL:0000037,2.67e-14,168;CL:0002032,7.73e-14,161;CL:0000837,7.73e-14,161;CL:0000988,5.34e-13,177;CL:0000766,1.81e-11,72;CL:0000860,2.88e-11,42;CL:0002057,2.88e-11,42;CL:0000738,1.35e-10,136;CL:0000557,2.79e-10,67;CL:0002393,1.70e-09,9;CL:0002397,1.70e-09,9;CL:0000473,8.11e-09,48;CL:0000234,8.11e-09,48;CL:0002009,6.23e-08,61;CL:0000839,7.12e-08,66;CL:0002194,8.35e-07,59;CL:0000576,8.35e-07,59;CL:0000040,8.35e-07,59;CL:0000559,8.35e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;3.21e-07;42 | |||
|ontology_enrichment_disease=DOID:305!5.38e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.55e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.33e-08!102;UBERON:0003061!2.33e-08!102;UBERON:0002193!1.12e-07!112;UBERON:0001474!4.73e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.07e-09,98;UBERON:0003061,1.07e-09,98;UBERON:0001474,5.10e-09,82;UBERON:0002193,8.40e-09,108;UBERON:0002371,2.29e-08,76;UBERON:0004765,2.88e-07,90;UBERON:0002405,3.82e-07,93 | |||
|phase1_expression=0,0.642301571672949,0.563817616383885,1.0007329835313,0,0.872338524100369,0,0,0.261185628199839,0.737201809504527,0.697801167972428,0.218441372130172,0,0.123766352960047,0.331397375727916,0,0,0.730310090387373,0,0.369363174230364,0.816002764977012,0.313454721478088,0.572471974262113,0.684372125364421,0.251085279189606,0.229240217243854,0.246301768349837,0.157421562627358,0.786728553697808,1.53531759238885,2.32224184974114,0,0.90361775633475,0,0.619737604642413,0.426507697462265,0.880801318004542,2.21598163412751,1.60435557976113,1.73608696572681,0.447830948479849,0.32389366601898,0.257575567634187,1.01778767145695,0.377875943688809,2.18325655069035,1.39457422143411,0.822335776043652,0.619412741790207,0.28769239232215,0,0.709446689665756,1.03423704220986,1.29096936716765,0,2.25890807451126,0.272906150057846,2.02251136000576,2.75475503133812,1.60464513538047,4.47535988059329,0.329851300186716,0.598390972864896,0.852449501065388,0.870627715885752,1.70215567407342,1.24564449799115,0.251248665256743,0.521482918420201,0.65156653411535,1.21079900526674,1.47311054395026,1.58231193720442,1.90129757680748,1.91343869968539,2.72556239160889,1.79725809834392,2.85336096398862,2.4108838004562,5.13022938734247,2.18808344918999,1.46131323011707,0,0.546138611262131,0,0.853460445133014,0,0,0,0,1.70763890732835,0.587237189370939,1.14681968437569,3.96513985737078,1.12101712596307,0.526768169550154,1.37696839079683,2.75107533924415,1.85041349099558,0,0.977766799900771,0.473447805734733,1.94826728407911,0.222820913770347,0.883817722424512,1.32920336750173,1.08321545506006,0.640456598628376,0.520237390239513,0.164437904603676,1.38175008892924,0,0.889719378972363,0.267540828089713,0,0.113309342697566,1.91610246800961,1.71813722741315,1.51811815211702,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0.710331756132051,0,2.62088766192152,1.60464117470104,2.17236605824198,0,0.670700859703636,0.255725123687061,0.361439152384566,0.50133791063589,0.289693037921647,0,0,0.472674085820339,0.443458794925128,0.614843499851882,0.851363990735132,0.364295288292542,0.370784442784429,1.29818957461873,0.522389211897802,0.26591592103773,0.238490624305342,0,1.11437250398869,0.39752481473341,0,0.694281003215189,1.13061588384802,0.419499436209906,0.275118041940067,0.626984899610432,1.29208379584664,0,2.00832367658802,0.805658634218294,0,0.976248230192678,0.367663080345869,0,0.625098097988558,0.673588117878509,0.450445921933289,0,0.949265659568129,0,7.9068250461638,7.75560528296651,0.436094052142534,0.496971951695318,0.379891534993739,0.662045904066094,0.860509862246441,1.06400514659507,0,0,0.24666754841716,0,0.269421344139376,0.653847612453835,0.151357427644931,0,0.468642863667593,0,0.570471821544449,0.149448680551801,0,0,0.561803226808994,0.408308342509787,0.737005903870608,0.413303124703062,0,0.741800787835671,0.910161361938026,0,0.505008341862199,0.125118519871964,0.277064115484183,0.438977620880838,0.30648779579902,0.600952235626387,0.453728732640084,0.717558542755448,0.640672166455702,0,1.80054657650641,1.13357782162283,0.257640540045629,0.558350568994769,0.675105328965065,0.292311015483596,0.757301322732344,0,0.484938170456436,0,0.302256294682921,0.169560592310488,0.386521706326594,0,0,0.121973706129595,0.397589304964456,0,0.310983165046111,0,0,1.56449532329816,0,0,0,0,1.18306800039844,1.51726221070292,0.241011029883482,1.32352767278873,1.08939722046203,0.71181185733329,0.808987848960987,2.5508790466295,2.30848294167834,0.738155454624648,1.40241773803446,0,1.47008711385542,0,0,0.590789906681404,0,0.368965315629341,0,0.109750285408626,0,0.100528972411631,0.185176890317059,0.325808305310325,1.03993478527958,0,0.231860809950154,0.117408694235822,0.433099343283221,0.462985512576611,0,2.37061319387782,0.858486162094873,0.492434012174795,0,0.743155811443641,0,0.335964256397719,0.141775097242386,0.179117045405697,0,0.383382679165211,1.47798971368783,1.05658120815871,0.829312462163088,2.88239906833923,3.1560608356595,1.14296209725904,2.29193055334967,3.51652341630141,1.71072446022705,1.33675740514321,0.901029173531752,0.285826432630578,0.448524337381443,0.43596006883328,0.22001485746285,0.387815147273333,0,0,0,0,1.02882949704857,0,0.266422179016099,0.428933980974443,0.542621605391443,0,0.325736184293735,0,0,0.904318131178758,0,0.499864955910285,0,0.502257091432126,0,0,0,0,0.289562613335158,0.410952645100767,0.358121926479791,0.224170287987055,2.1673383622212,1.07813787429759,2.05348858047597,0.76228387266739,0,0.773288812777695,0.167516265334349,1.27587750330633,4.49404214368309,0,2.90090859405225,0.49076596687656,0,0.542530047399471,0.207970861530807,0.713715955188647,0.315404830067869,0.234282829985426,0.300946099727719,0,0,0,0.368738337083406,0.260650843404249,0.391602314925481,0,1.6541442089831,2.5885704098234,0.74709290462411,0,0,0,0,0.153461973288062,0,0.256278298511402,0.511707249066704,0.321707842287215,0,0.308419387605311,0.177561725313127,0,0.519254429183621,0,0.362578348774867,0.200506470303285,0.184161977871793,0.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| |||
|short_description=p3@TRAPPC9 | |||
}} |
Revision as of 00:09, 23 January 2014
Short description: | p3@TRAPPC9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRAPPC9_5end |
Coexpression cluster: | NA |
Association with transcript: | 50bp_to_ENST00000389327, ENST00000438773, NM_001160372, uc003yvj.2_5end |
EntrezGene: | TRAPPC9 |
HGNC: | 30832 |
UniProt: | Q96Q05 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 4.08e-18 | 108 |
common myeloid progenitor | 4.08e-18 | 108 |
hematopoietic stem cell | 2.67e-14 | 168 |
hematopoietic oligopotent progenitor cell | 7.73e-14 | 161 |
hematopoietic multipotent progenitor cell | 7.73e-14 | 161 |
hematopoietic cell | 5.34e-13 | 177 |
myeloid leukocyte | 1.81e-11 | 72 |
classical monocyte | 2.88e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.88e-11 | 42 |
leukocyte | 1.35e-10 | 136 |
granulocyte monocyte progenitor cell | 2.79e-10 | 67 |
intermediate monocyte | 1.70e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.70e-09 | 9 |
defensive cell | 8.11e-09 | 48 |
phagocyte | 8.11e-09 | 48 |
macrophage dendritic cell progenitor | 6.23e-08 | 61 |
myeloid lineage restricted progenitor cell | 7.12e-08 | 66 |
monopoietic cell | 8.35e-07 | 59 |
monocyte | 8.35e-07 | 59 |
monoblast | 8.35e-07 | 59 |
promonocyte | 8.35e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.07e-09 | 98 |
blood island | 1.07e-09 | 98 |
bone element | 5.10e-09 | 82 |
hemolymphoid system | 8.40e-09 | 108 |
bone marrow | 2.29e-08 | 76 |
skeletal element | 2.88e-07 | 90 |
immune system | 3.82e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.55e-07 | 106 |