FFCP PHASE1:Hg19::chr8:129061640..129061667,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1299 | |||
|description=CAGE_peak_at_chr8:129061640..129061667,+ | |||
|id=chr8:129061640..129061667,+ | |||
|ontology_enrichment_celltype=CL:0000763!1.14e-55!112;CL:0000049!1.14e-55!112;CL:0000988!1.08e-47!182;CL:0000037!9.16e-47!172;CL:0000566!9.16e-47!172;CL:0002032!1.61e-46!165;CL:0000837!1.61e-46!165;CL:0000839!8.20e-42!70;CL:0000557!2.43e-40!71;CL:0000766!9.78e-40!76;CL:0002009!4.13e-36!65;CL:0002057!2.94e-35!42;CL:0002194!8.95e-35!63;CL:0000576!8.95e-35!63;CL:0000040!8.95e-35!63;CL:0000559!8.95e-35!63;CL:0002031!6.59e-32!124;CL:0000860!9.15e-32!45;CL:0000738!4.69e-31!140;CL:0002087!1.81e-27!119;CL:0000134!4.18e-10!358;CL:0002393!4.57e-10!9;CL:0002397!4.57e-10!9;CL:0002320!2.60e-09!365;CL:0000219!2.54e-07!390;CL:0000071!4.76e-07!18;CL:0002546!4.76e-07!18;CL:0002274!8.47e-07!5;CL:0000457!8.47e-07!5;CL:0002191!8.47e-07!5;CL:0000097!8.47e-07!5;CL:0000831!8.47e-07!5;CL:0002028!8.47e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000766;1.47e-26;69!CL:0000576;1.83e-25;48!CL:0000860;2.21e-25;33!CL:0002057;2.21e-25;33!CL:0000473;8.11e-23;39!CL:0000234;8.11e-23;39!CL:0000763;7.36e-22;100!CL:0002393;1.66e-13;6!CL:0002397;1.66e-13;6!CL:0000097;5.21e-12;5!CL:0000988;3.55e-10;177!CL:0000738;7.42e-09;136!CL:0002544;2.57e-08;6!CL:0002087;2.85e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,7.04e-76,108;CL:0000049,7.04e-76,108;CL:0000839,1.51e-59,66;CL:0000766,3.52e-58,72;CL:0000557,6.94e-53,67;CL:0000037,7.85e-51,168;CL:0000988,1.72e-50,177;CL:0002032,3.00e-50,161;CL:0000837,3.00e-50,161;CL:0002194,1.65e-46,59;CL:0000576,1.65e-46,59;CL:0000040,1.65e-46,59;CL:0000559,1.65e-46,59;CL:0002009,1.28e-44,61;CL:0000473,1.77e-42,48;CL:0000234,1.77e-42,48;CL:0000860,3.32e-41,42;CL:0002057,3.32e-41,42;CL:0000738,2.06e-31,136;CL:0002031,2.20e-31,120;CL:0002087,4.81e-25,115;CL:0002393,3.50e-15,9;CL:0002397,3.50e-15,9;CL:0000134,5.43e-15,354;CL:0002320,2.39e-14,361;CL:0000097,4.24e-12,5;CL:0002028,4.24e-12,5;CL:0000219,4.31e-12,386;CL:0000034,3.85e-10,441;CL:0000048,6.83e-10,427;CL:0000723,1.64e-09,433;CL:0002544,2.69e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002057;3.73e-28;42!CL:0000049;9.05e-19;108 | |||
|ontology_enrichment_disease=DOID:8692!8.34e-18!31;DOID:1240!1.63e-14!39;DOID:2531!1.11e-11!51;DOID:0060083!1.11e-11!51;DOID:1036!1.14e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.90e-22;31!DOID:1240;3.03e-15;39!DOID:1036;2.51e-14;8!DOID:2531;2.66e-10;51!DOID:0060083;2.66e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,5.34e-23,31;DOID:1240,4.73e-19,39;DOID:2531,2.38e-16,51;DOID:0060083,2.38e-16,51;DOID:1036,2.06e-14,8 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.59e-38!102;UBERON:0003061!3.59e-38!102;UBERON:0002193!2.23e-33!112;UBERON:0002371!3.54e-33!80;UBERON:0001474!2.45e-30!86;UBERON:0003081!1.59e-24!216;UBERON:0004765!1.63e-22!101;UBERON:0001434!1.63e-22!101;UBERON:0002405!8.72e-22!115;UBERON:0002204!1.23e-10!167;UBERON:0002384!1.40e-08!375;UBERON:0001986!4.76e-07!18;UBERON:0004638!4.76e-07!18;UBERON:0004852!4.76e-07!18 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.06e-45,76;UBERON:0002390,5.15e-43,98;UBERON:0003061,5.15e-43,98;UBERON:0001474,6.96e-41,82;UBERON:0002193,1.03e-37,108;UBERON:0004765,4.08e-36,90;UBERON:0002405,1.54e-34,93;UBERON:0001434,3.12e-31,100;UBERON:0003081,9.72e-24,203;UBERON:0002204,1.28e-14,167;UBERON:0002384,1.80e-13,371;UBERON:0000926,2.06e-10,315;UBERON:0004120,2.06e-10,315;UBERON:0006603,2.06e-10,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.410502947249729,0.236132343941038,1.96682138424452,0,1.54816123316076,0,0,0,0.154934401160603,0,0,8.30993112797816,9.6261334785668,3.90619567288533,0,0,0.257575567634187,1.01778767145695,1.51150377475524,0.727752183563449,0.929716147622738,0.822335776043652,1.23882548358041,1.43846196161075,0.512321413058201,0.709446689665756,3.44745680736619,5.80936215225443,0,2.07066573496865,1.91034305040492,2.02251136000576,2.44867113896722,1.28371610830437,4.47535988059329,0.989553900560148,0.797854630486527,2.13112375266347,4.35313857942876,2.8369261234557,1.24564449799115,0.502497330513487,1.0429658368404,0.65156653411535,4.23779651843358,5.89244217580104,6.0127853613768,2.11255286311942,2.97646019951061,2.72556239160889,1.90958672949042,3.15371474967163,2.25015821375912,3.70516566863623,0.99458338599545,1.64397738388171,0,0,0,0,0,0.574752439954483,0,0.954053754535364,0,0.587237189370939,0.382273228125229,0,1.12101712596307,6.847986204152,0,0,0.205601498999509,1.17030546773475,0,0,0,0.111410456885174,0,0,0,0.384273959177026,0.390178042679635,0,0.552700035571697,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0.383220493601921,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,2.59637914923747,2.43781632218974,1.46253756570752,0.476981248610684,0,0,2.18638648103376,2.58070378531837,1.38856200643038,1.13061588384802,0.838998872419812,0.825354125820202,0.835979866147242,0,0,0,0,0,0,0,1.62028389576352,1.16089646769304,0.673588117878509,0.675668882899933,0,1.89853131913626,1.83201743930407,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0.163461903113459,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23108503043699,0.702012795417713,2.37809859661965,0,0,0,0,0,0,15.7652236126702,11.2701995536929,2.90259361757081,3.45887888200707,4.16600030307054,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,1.08524321078289,0,0,0,0,0.904318131178758,0,0.399891964728228,1.2162378064119,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,2.15714200818617,2.02782359826544,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0.340187410553031,0,0,0.270946437543853,0,0,0,0,2.63111851975121,2.3529190592241,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0.286249773483982,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.811641507850816,0.6196469961995,1.12678241012897,0.430234056612155,0.294747123039363,0,0,0,0,0,0,0,0.670302275535787,0,0.376575203107117,0,0,0,0,0,0,0,0.238231775457789,0,0.648473311192717,1.08006287447623,0,0,0,0,0.185803175125719,0,0,0,0.798317485731266,0,0.846694330895531,10.3879020887858,0,0.684704037099577,0.783399478865116,0,0.169291777801603,0,0,1.27753871307098,4.12206413706918,2.45792611446766,2.46043718681657,2.50273712567863,3.90776190804081,33.1303346935338,16.0013618632026,13.7932396022751,0.66614393599564,12.6888304579065,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0.179021174675609,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,1.72678282034527,10.8037593235102,18.2732485099916,19.9983785004094,17.4534450454876,16.1290672815557,9.05938500188159,0,0,0,0,0,0.176915129006678,0,1.18608451472249,1.72989514525104,0.939797545549098,0,0,0,0,0,0,2.36750641709634,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0.137041924646751,0,0,1.56441106187842,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0.866851769704557,0,0,0,0.429765441419957,2.10309883423452,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.674921674654501,0.77380195455795,0.0607495566580247,0,0.0788057072991982,0,0,0.717149357331379,0,0,0,0,0,0,0,0,10.5078426559154,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0,5.60245952552121,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.53168342911599,0,0.300515217994437,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,1.61179956973339,2.47041157728778,1.75427239662966,0,0.771656153083659,0,0,0,1.21543982470953,0.138258436151731,0,0,0,0,0.245772908753719,0,1.79988656269437,3.62751880960079,0,0,0,0,0,0,0.646948868380091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0.1219179249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| |||
|short_description=p@chr8:129061640..129061667,+ | |||
}} |
Revision as of 23:49, 22 January 2014
Short description: | p@chr8:129061640..129061667, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:129061640..129061667, + |
Coexpression cluster: | C1299_chronic_acute_chorionic_leukemia_choriocarcinoma_pancreatic_placenta |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.06e-45 | 76 |
hematopoietic system | 5.15e-43 | 98 |
blood island | 5.15e-43 | 98 |
bone element | 6.96e-41 | 82 |
hemolymphoid system | 1.03e-37 | 108 |
skeletal element | 4.08e-36 | 90 |
immune system | 1.54e-34 | 93 |
skeletal system | 3.12e-31 | 100 |
lateral plate mesoderm | 9.72e-24 | 203 |
musculoskeletal system | 1.28e-14 | 167 |
connective tissue | 1.80e-13 | 371 |
mesoderm | 2.06e-10 | 315 |
mesoderm-derived structure | 2.06e-10 | 315 |
presumptive mesoderm | 2.06e-10 | 315 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 5.34e-23 | 31 |
leukemia | 4.73e-19 | 39 |
hematologic cancer | 2.38e-16 | 51 |
immune system cancer | 2.38e-16 | 51 |
chronic leukemia | 2.06e-14 | 8 |