FFCP PHASE1:Hg19::chr8:107440851..107440855,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1062 | |||
|description=CAGE_peak_at_chr8:107440851..107440855,+ | |||
|id=chr8:107440851..107440855,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.13e-14;3!UBERON:0005754;1.30e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;8.61e-12;1!DOID:4549;8.61e-12;1!DOID:5861;8.61e-12;1!DOID:6496;8.61e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,8.62e-12,1;DOID:4549,8.62e-12,1;DOID:5861,8.62e-12,1;DOID:6496,8.62e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.72e-26!57;UBERON:0005068!9.72e-26!57;UBERON:0006241!9.72e-26!57;UBERON:0007135!9.72e-26!57;UBERON:0000955!7.29e-25!69;UBERON:0006238!7.29e-25!69;UBERON:0002616!2.20e-24!59;UBERON:0002780!2.19e-22!41;UBERON:0001890!2.19e-22!41;UBERON:0006240!2.19e-22!41;UBERON:0001017!2.53e-22!82;UBERON:0005743!1.22e-21!86;UBERON:0003080!1.45e-21!42;UBERON:0001893!1.82e-21!34;UBERON:0002020!3.76e-21!34;UBERON:0003528!3.76e-21!34;UBERON:0002346!1.52e-20!90;UBERON:0002791!1.67e-20!33;UBERON:0001869!2.31e-20!32;UBERON:0002619!4.84e-20!22;UBERON:0000956!6.19e-20!25;UBERON:0000203!6.19e-20!25;UBERON:0000073!1.29e-19!94;UBERON:0001016!1.29e-19!94;UBERON:0003075!2.74e-19!86;UBERON:0007284!2.74e-19!86;UBERON:0007023!4.06e-18!115;UBERON:0001950!8.19e-18!20;UBERON:0000033!9.80e-17!123;UBERON:0000153!4.72e-15!129;UBERON:0007811!4.72e-15!129;UBERON:0000924!1.09e-14!173;UBERON:0006601!1.09e-14!173;UBERON:0003056!5.42e-14!61;UBERON:0004121!1.16e-13!169;UBERON:0000475!5.72e-10!365;UBERON:0004111!4.80e-09!241;UBERON:0000477!1.63e-08!286;UBERON:0000481!1.77e-08!347;UBERON:0000200!7.19e-08!6;UBERON:0001871!1.15e-07!7;UBERON:0000483!3.26e-07!309;UBERON:0000025!5.08e-07!194;UBERON:0000119!6.30e-07!312;UBERON:0000349!6.78e-07!5;UBERON:0001872!7.27e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.20e-33;22!UBERON:0000956;1.21e-29;25!UBERON:0000203;1.21e-29;25!UBERON:0003528;7.25e-27;34!UBERON:0002020;7.25e-27;34!UBERON:0001869;2.88e-26;32!UBERON:0002791;3.33e-25;32!UBERON:0002780;3.33e-25;41!UBERON:0001890;3.33e-25;41!UBERON:0001893;1.93e-23;34!UBERON:0001950;2.20e-22;20!UBERON:0001905;1.38e-21;2!UBERON:0002757;1.38e-21;2!UBERON:0010134;1.38e-21;2!UBERON:0005408;1.38e-21;2!UBERON:0001899;1.38e-21;2!UBERON:0001954;4.69e-21;2!UBERON:0003022;4.69e-21;2!UBERON:0002421;4.69e-21;2!UBERON:0002600;4.69e-21;2!UBERON:0000073;2.88e-19;53!UBERON:0002616;2.88e-19;53!UBERON:0000349;1.47e-18;5!UBERON:0001871;2.89e-13;6!UBERON:0000955;1.67e-12;68!UBERON:0003112;1.30e-11;1!UBERON:0000998;1.30e-11;1!UBERON:0006868;1.30e-11;1!UBERON:0011158;1.30e-11;1!UBERON:0003128;1.30e-11;1!UBERON:0001703;1.30e-11;1!UBERON:0002241;1.30e-11;1!UBERON:0003296;2.82e-11;4!UBERON:0010133;2.82e-11;4!UBERON:0002784;2.82e-11;4!UBERON:0001017;3.59e-09;75!UBERON:0001872;7.85e-09;5!UBERON:0001016;3.55e-08;83!UBERON:0000200;1.25e-07;6!UBERON:0002037;1.68e-07;6!UBERON:0007023;4.33e-07;114!UBERON:0001894;8.36e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.48e-34,53;UBERON:0002616,5.48e-34,53;UBERON:0002619,9.20e-34,22;UBERON:0002780,2.07e-32,41;UBERON:0001890,2.07e-32,41;UBERON:0003080,2.07e-32,41;UBERON:0006240,2.07e-32,41;UBERON:0001049,4.31e-32,56;UBERON:0005068,4.31e-32,56;UBERON:0006241,4.31e-32,56;UBERON:0007135,4.31e-32,56;UBERON:0000956,9.58e-30,25;UBERON:0000203,9.58e-30,25;UBERON:0002791,1.10e-28,32;UBERON:0001869,1.10e-28,32;UBERON:0003528,5.67e-27,34;UBERON:0002020,5.67e-27,34;UBERON:0001893,5.67e-27,34;UBERON:0000955,9.43e-26,68;UBERON:0006238,9.43e-26,68;UBERON:0001950,1.54e-22,20;UBERON:0001905,1.38e-21,2;UBERON:0002757,1.38e-21,2;UBERON:0010134,1.38e-21,2;UBERON:0005408,1.38e-21,2;UBERON:0001899,1.38e-21,2;UBERON:0003056,2.14e-21,61;UBERON:0001017,2.16e-21,81;UBERON:0003075,2.16e-21,82;UBERON:0007284,2.16e-21,82;UBERON:0001954,7.05e-21,2;UBERON:0003022,7.05e-21,2;UBERON:0002421,7.05e-21,2;UBERON:0002600,7.05e-21,2;UBERON:0002346,2.60e-20,86;UBERON:0007023,4.79e-20,114;UBERON:0001016,4.31e-19,89;UBERON:0000349,1.39e-18,5;UBERON:0010371,1.83e-16,104;UBERON:0010314,1.32e-14,132;UBERON:0001871,2.44e-13,6;UBERON:0003112,1.45e-11,1;UBERON:0011158,1.45e-11,1;UBERON:0003128,1.45e-11,1;UBERON:0001703,1.45e-11,1;UBERON:0002241,1.45e-11,1;UBERON:0004761,1.45e-11,1;UBERON:0009617,1.45e-11,1;UBERON:0000998,1.60e-11,1;UBERON:0006868,1.60e-11,1;UBERON:0003296,2.82e-11,4;UBERON:0010133,2.82e-11,4;UBERON:0002784,2.82e-11,4;UBERON:0004121,4.60e-09,171;UBERON:0000924,4.60e-09,171;UBERON:0006601,4.60e-09,171;UBERON:0001872,5.95e-09,5;UBERON:0000025,5.98e-08,192;UBERON:0000200,1.09e-07,6;UBERON:0011216,1.43e-07,223;UBERON:0002037,1.74e-07,6;UBERON:0006215,1.74e-07,6;UBERON:0004111,5.48e-07,240;UBERON:0001894,8.37e-07,7;UBERON:0006222,8.37e-07,7 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0.22465726229299,0,0,0,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.446498641420399,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0.622422070799533,0,0,0,0,0,0,0,0.149448680551801,0,0.485618833104395,0,0.408308342509787,0.122834317311768,0,0,0.494533858557114,0,0,0.505008341862199,0,0.277064115484183,0,0.30648779579902,0,0,0,0,0,0,0,0.257640540045629,0,0.506328996723799,0,0.504867548488229,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0.206768026122887,0,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0.462145851343933,0.460511024178389,0.137836572484531,0.429680979473094,0.145016693914229,0.340906509664404,0.178064071293475,0,0,0.255225424989168,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0.179872457583315,0.54907405947211,0,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,1.1974762285969,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0.307160702099232,0.994147647766298,1.82870241333667,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0.254253650292766,0,0.344743373241465,1.74962768029953,0,1.77148277162768,0.241192877250816,1.52581736317083,0.995213339381022,1.47773809476774,0.219385397153973,0,0,0.307801034015188,0,0,0,0,0,0.183195186803725,0,0,0.156980256395025,0,0,0,0,0,0,0,0.979396848954886,0,0,0,0.0884575645033392,0,0,0,0,0.269604531922708,0,0,0,0,0,0.394584402849391,0,0.61214552326098,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0,10.061198442831,0.451961481561065,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,2.38568906942791,1.0896272488926,0,0,0,0.2249738915515,0,0.789744236554321,0,0.157611414598396,0.209818352539992,0.211200673038813,0,0,0,0,0,0.542999601753713,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0.129282956361551,0.52893040697076,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,2.65820453990096,0.488105059607853,0.876336514945499,0,0.443716206147409,0.372578417648301,0.415045904808692,0.124980407962107,0.303298235083296,0,0.235265819698172,0,0,0.298509605773748,0,0.554805861502613,0,0.50313580350515,0,0,0.604923695052956,0.466311601748341,0,0,0,0.155262956876259,0.829412415681711,0,0,0.300515217994437,0,0,0,0.107410557042488,0,0.796191777397232,0,0,0.336749488765919,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0,0,0,0,0,1.02496607435179,0,0,1.65910123382077,0,0,0,0,0,0,0,0.533458648470704,0,0,0.184105950251841,0,0,0,0,0,0,0,0.425149840203366,0.247871528518004,0,0.318004350653419,0,0,0,0.3062454773532,0.385375350578757,0,1.43670473151436,0.205116364240755,0.504143392443436,0.276629009856872,2.26065903884592,0,0,0.11796972334774,0,0,0.381382095467167,0,0.596748666348824,0,0.20170506870352,0,0,0,0.147856086217045,0.607838261565552,1.56215619722769,1.86018116851066,0.697573912132975,0.546974809018219,0,0,0.175871244359621,0,4.28561468702629,2.35398605553177,0,0.455324382702595,0,0.230467975111559,0,0.475788130837822,0.591954962065642,0,0.333694205676207,0,0,0,0,0.215927591218621,0.9555033757741,0.500335809236594,0.158013611732727,0,0,0,0,0.17071847709395,0.691259661814092,0,0,0.0852134047591577,2.11693525095465,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0.0771741581079447,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0.187967835959707,0.0644578879735772,0.0999411559249289,0,0,0,0,0.458729283404541,0.143339583151451,0,1.29183831362738,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0,0,0,0,0,0.0636471582781649,0,0,0.342233301085281,0,0,0,0.0814032686109745,0.106727345877715,0,0.179650404213174,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr8:107440851..107440855,+ | |||
}} |
Revision as of 23:19, 22 January 2014
Short description: | p@chr8:107440851..107440855, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:107440851..107440855, + |
Coexpression cluster: | C1062_extraskeletal_pineal_amygdala_middle_medial_parietal_hippocampus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 8.62e-12 | 1 |
extraosseous chondrosarcoma | 8.62e-12 | 1 |
myxoid chondrosarcoma | 8.62e-12 | 1 |
extraskeletal myxoid chondrosarcoma | 8.62e-12 | 1 |