FFCP PHASE1:Hg19::chr8:99057769..99057776,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6156 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10333 | |||
|TSSclassifier=strong | |||
|UniProt=E5RJH3 | |||
|association_with_transcript=0bp_to_ENST00000396070,ENST00000518164,ENST00000518850,ENST00000520998,ENST00000521112,ENST00000523172,uc003yif.2,uc010mbk.1_5end | |||
|coexpression_cluster_id=C527 | |||
|description=CAGE_peak_1_at_RPL30_5end | |||
|id=chr8:99057769..99057776,- | |||
|ontology_enrichment_celltype=CL:0002087!2.92e-20!119;CL:0000542!6.18e-18!53;CL:0000051!6.18e-18!53;CL:0000838!1.29e-17!52;CL:0000988!5.38e-16!182;CL:0002031!5.53e-16!124;CL:0000037!6.55e-16!172;CL:0000566!6.55e-16!172;CL:0000738!1.02e-15!140;CL:0002032!1.45e-13!165;CL:0000837!1.45e-13!165;CL:0000791!1.59e-12!18;CL:0000789!1.59e-12!18;CL:0002420!1.59e-12!18;CL:0002419!1.59e-12!18;CL:0000790!1.59e-12!18;CL:0000084!4.66e-11!25;CL:0000827!4.66e-11!25;CL:0002057!2.22e-10!42;CL:0000860!3.85e-09!45;CL:0000236!4.41e-09!14;CL:0000625!2.39e-08!11;CL:0000003!4.91e-07!722;CL:0000945!6.68e-07!24;CL:0000826!6.68e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.59e-12;18!CL:0000789;1.59e-12;18!CL:0002419;1.59e-12;18!CL:0000542;2.70e-11;53!CL:0000084;4.71e-11;25!CL:0002087;9.61e-09;104!CL:0000236;1.36e-08;13!CL:0000625;2.39e-08;11!CL:0000860;5.76e-07;33!CL:0002057;5.76e-07;33!CL:0000945;6.67e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,7.71e-22,115;CL:0000542,6.18e-18,53;CL:0000051,6.18e-18,53;CL:0000838,1.29e-17,52;CL:0002031,2.82e-17,120;CL:0000037,6.06e-17,168;CL:0000738,6.81e-17,136;CL:0000988,8.14e-17,177;CL:0002032,1.62e-14,161;CL:0000837,1.62e-14,161;CL:0000791,1.59e-12,18;CL:0000789,1.59e-12,18;CL:0002420,1.59e-12,18;CL:0002419,1.59e-12,18;CL:0000790,1.59e-12,18;CL:0000084,4.66e-11,25;CL:0000827,4.66e-11,25;CL:0000860,2.22e-10,42;CL:0002057,2.22e-10,42;CL:0000236,4.41e-09,14;CL:0000625,2.39e-08,11;CL:0000945,6.68e-07,24;CL:0000826,6.68e-07,24;CL:0000473,8.07e-07,48;CL:0000234,8.07e-07,48 | |||
|ontology_enrichment_development_v019=CL:0000790;1.59e-12;18!CL:0000051;2.70e-11;53!CL:0002057;8.56e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.28e-07,98;UBERON:0003061,6.28e-07,98 | |||
|phase1_expression=668.213078957107,542.744828063642,477.130657864862,950.696334354739,1016.38952872765,1203.82716325851,1261.43339327819,757.43212823877,984.931003941591,693.952636680261,1703.3326510207,888.837943197671,1112.04158021116,1247.93613689615,1230.14705870202,1077.7372097622,1045.6750061216,1146.58684190818,997.822573526587,925.993477795522,1236.44818963142,1607.39581173963,819.493631156215,519.027819876377,542.720830968333,518.08289097111,490.468921373976,493.280466492828,1761.87859600624,1702.28338056114,960.169596806303,982.861288967973,541.869447882072,793.492105817926,1349.86597011176,1413.73084785492,3467.71478898388,1232.63978398343,952.786669930643,1119.7760928938,836.324296286117,709.974915913603,523.393553432667,980.711120568164,1037.64734136947,835.702090792027,1081.72473775906,1057.93497588016,795.325960458626,1195.64958249086,1443.97790270454,1855.67605793573,1340.37120670397,1221.90250602418,1419.2695795087,1091.61732700756,1162.03438694631,1783.85501952508,1418.39275724676,1423.64116410955,1282.51027435288,1030.4554617833,1249.24088768428,966.251509457618,1515.47264411847,1176.18957078473,1088.07046899527,1176.84874806259,1260.42421382163,1651.286786293,1198.08561571144,1713.59584025014,1935.16749920101,1636.80595834492,1692.75543632168,1904.11981850707,1374.00381618393,1400.54970263989,754.285178369397,2042.68633439353,1558.90999920927,1696.76732431968,5181.32943694134,4814.75799688695,5361.07227303564,4865.15126748075,4659.40810113808,4755.50168818339,5327.3606297732,5998.13595476383,1945.00071544699,2216.82038987529,1956.85665477305,3450.99338919837,4270.51474135632,1883.1962061418,2326.09303159608,2953.47588205997,2530.74885118496,1545.30477689604,4764.00577138319,5785.53218607844,4369.96351818945,1075.77937168324,3142.26660912661,3216.4506154596,2125.81033055537,1021.65636613199,997.945373826946,1458.0709001208,1802.07846598152,1687.52336823521,3779.5279218746,4298.31094408933,3524.93786270382,1128.22112523967,3780.47016938295,3458.26661133719,2904.16002499985,4846.97277894113,6415.12527084729,6644.61024273858,4494.06500399521,4402.35546387853,4490.01031229131,3634.05726437157,5226.47970040246,2168.88534361167,1871.81393028877,2153.6837101411,185.293218398611,1099.94940991396,968.814631088429,851.912082170423,811.164739408869,1094.89483682487,239.381070062381,871.563052712021,908.66866258102,806.429818571345,695.651502689558,440.94105766305,1225.12505452782,1287.73436979032,618.262784912172,435.324343248168,498.060520103669,1708.06985127486,2791.33516460702,2638.09117444257,701.432535597102,825.825211301879,631.795712925822,750.728946875085,813.828906247217,448.16729032037,551.74671165718,906.525991166006,492.380507558407,439.488164560012,1210.50209791299,894.079996324971,1210.05968132382,709.957408147872,780.166695810135,590.271203957767,556.159255995023,476.23395096397,643.92987735671,414.829093231272,710.82276644998,583.78724924176,686.371067542536,1323.98154230473,757.385254383665,687.223786803674,127.642450303943,266.184384054899,539.095940941503,855.594017817161,676.78863292633,581.148744070829,360.07116795753,788.192142279745,831.694163041278,908.295923297233,892.496507019518,686.561795273024,924.93030764824,614.398151803372,1045.99131518206,662.917744844053,846.757371989696,735.259973086271,706.78174088444,735.04055479362,599.909485506494,550.045322921591,631.025203518877,540.635848991188,1104.51608397156,867.099322977395,331.689196180577,228.300831158967,542.576339408716,771.429782026132,493.231547390357,924.472292754171,215.267562826634,1050.27523820971,931.864569398593,246.974972077463,906.965309827501,197.610294214998,899.688883506905,121.856511878194,724.249259363189,190.335065780062,952.072101657302,1371.08185393716,222.946024100434,666.575881874068,646.025856702958,617.081904150407,492.852239907638,400.379215163049,991.036362302963,895.238585011633,1132.5423611492,956.791537791869,791.025867495095,835.433174924575,727.490325333644,517.808955245273,508.336510577128,1334.12905723588,1814.08313743567,904.337179504567,739.243865992476,765.451030909939,918.19732299718,715.951853287647,785.128478638619,1122.47064043337,924.399322205505,918.391463631034,1071.06356466036,928.400542578811,898.466066736446,1312.78779267289,572.932757394675,542.52062360605,557.114882000564,1426.80873730815,526.021551648897,654.531196288875,469.5117209781,582.241081874469,807.046590520572,985.974352493182,923.992353860081,932.821502395782,710.110202764345,818.468659124042,492.2946549308,913.117782088792,1298.21137726482,978.667359094773,1689.45700283693,2170.25301777584,533.059818179215,359.898559784148,366.227183879426,1148.23946633802,338.651970448901,605.521440322233,860.657403174372,733.850694747754,569.706661239504,106.415259385524,489.725389981563,544.236303294527,630.81303610604,484.644701923873,307.139314691222,307.118694148855,416.121937595667,518.349511448797,608.018964354752,710.912017916553,398.727873519657,553.815425581737,704.075511165747,602.033988304179,782.093880334555,106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| |||
|short_description=p1@RPL30 | |||
}} |
Revision as of 23:01, 22 January 2014
Short description: | p1@RPL30 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPL30_5end |
Coexpression cluster: | C527_CD4_CD8_CD19_CD34_CD133_skeletal_Mesenchymal |
Association with transcript: | 0bp_to_ENST00000396070, ENST00000518164, ENST00000518850, ENST00000520998, ENST00000521112, ENST00000523172, uc003yif.2, uc010mbk.1_5end |
EntrezGene: | RPL30 |
HGNC: | 10333 |
UniProt: | E5RJH3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 7.71e-22 | 115 |
lymphocyte | 6.18e-18 | 53 |
common lymphoid progenitor | 6.18e-18 | 53 |
lymphoid lineage restricted progenitor cell | 1.29e-17 | 52 |
hematopoietic lineage restricted progenitor cell | 2.82e-17 | 120 |
hematopoietic stem cell | 6.06e-17 | 168 |
leukocyte | 6.81e-17 | 136 |
hematopoietic cell | 8.14e-17 | 177 |
hematopoietic oligopotent progenitor cell | 1.62e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.62e-14 | 161 |
mature alpha-beta T cell | 1.59e-12 | 18 |
alpha-beta T cell | 1.59e-12 | 18 |
immature T cell | 1.59e-12 | 18 |
mature T cell | 1.59e-12 | 18 |
immature alpha-beta T cell | 1.59e-12 | 18 |
T cell | 4.66e-11 | 25 |
pro-T cell | 4.66e-11 | 25 |
classical monocyte | 2.22e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.22e-10 | 42 |
B cell | 4.41e-09 | 14 |
CD8-positive, alpha-beta T cell | 2.39e-08 | 11 |
lymphocyte of B lineage | 6.68e-07 | 24 |
pro-B cell | 6.68e-07 | 24 |
defensive cell | 8.07e-07 | 48 |
phagocyte | 8.07e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.28e-07 | 98 |
blood island | 6.28e-07 | 98 |