FFCP PHASE1:Hg19::chr8:94930034..94930089,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54704 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9279 | |||
|TSSclassifier=strong | |||
|UniProt=B4DYX8,Q9P0J1 | |||
|association_with_transcript=42bp_to_NM_001161778,uc011lgn.1_5end | |||
|coexpression_cluster_id=C2932 | |||
|description=CAGE_peak_2_at_PDP1_5end | |||
|id=chr8:94930034..94930089,+ | |||
|ontology_enrichment_celltype=CL:0002321!2.01e-14!248;CL:0000220!3.88e-14!246;CL:0000359!5.30e-10!32;CL:0000222!2.79e-09!119;CL:0000055!3.03e-09!180;CL:0002319!4.75e-09!25;CL:0000192!6.55e-09!42;CL:0000514!6.55e-09!42;CL:0000393!7.88e-09!60;CL:0000211!7.88e-09!60;CL:0000680!1.44e-07!57;CL:0000056!1.44e-07!57;CL:0000355!1.44e-07!57;CL:0000187!2.61e-07!54;CL:0000243!5.35e-07!15;CL:0000125!5.35e-07!15;CL:0000030!5.35e-07!15;CL:0000339!5.35e-07!15;CL:0000133!5.37e-07!59;CL:0000076!9.12e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.98e-11;32!CL:0002319;3.35e-10;25!CL:0000192;2.20e-07;43!CL:0000243;2.36e-07;15!CL:0000125;2.36e-07;15!CL:0000095;3.59e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.81e-13,250;CL:0000359,2.06e-11,32;CL:0002319,4.28e-10,25;CL:0000192,1.37e-09,43;CL:0000514,1.37e-09,43;CL:0000222,1.52e-09,121;CL:0000393,2.60e-08,61;CL:0000211,2.60e-08,61;CL:0000076,2.26e-07,63;CL:0000243,2.49e-07,15;CL:0000125,2.49e-07,15;CL:0000030,2.49e-07,15;CL:0000339,2.49e-07,15;CL:0000095,3.77e-07,17;CL:0000123,3.77e-07,17;CL:0000133,5.22e-07,59;CL:0000680,5.88e-07,58;CL:0000056,5.88e-07,58;CL:0000355,5.88e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.20e-09;82!CL:0000514;2.20e-07;43!CL:0000339;2.36e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.21e-30!82;UBERON:0005743!1.67e-30!86;UBERON:0000073!1.95e-30!94;UBERON:0001016!1.95e-30!94;UBERON:0000955!8.53e-27!69;UBERON:0006238!8.53e-27!69;UBERON:0004111!1.76e-24!241;UBERON:0000025!4.09e-23!194;UBERON:0001049!6.22e-23!57;UBERON:0005068!6.22e-23!57;UBERON:0006241!6.22e-23!57;UBERON:0007135!6.22e-23!57;UBERON:0002616!7.78e-23!59;UBERON:0003075!1.74e-22!86;UBERON:0007284!1.74e-22!86;UBERON:0000483!2.23e-22!309;UBERON:0000119!2.26e-22!312;UBERON:0004121!6.09e-22!169;UBERON:0000033!1.03e-21!123;UBERON:0000924!3.25e-21!173;UBERON:0006601!3.25e-21!173;UBERON:0002346!3.54e-21!90;UBERON:0000477!1.44e-20!286;UBERON:0002780!1.47e-20!41;UBERON:0001890!1.47e-20!41;UBERON:0006240!1.47e-20!41;UBERON:0000153!6.48e-20!129;UBERON:0007811!6.48e-20!129;UBERON:0001893!1.04e-19!34;UBERON:0001869!1.50e-19!32;UBERON:0003080!2.22e-19!42;UBERON:0002020!2.88e-19!34;UBERON:0003528!2.88e-19!34;UBERON:0002791!4.92e-19!33;UBERON:0003056!2.98e-17!61;UBERON:0000956!6.35e-16!25;UBERON:0000203!6.35e-16!25;UBERON:0000467!8.53e-16!625;UBERON:0000480!1.09e-15!626;UBERON:0000475!1.27e-15!365;UBERON:0000468!1.06e-14!659;UBERON:0001637!3.53e-14!42;UBERON:0003509!3.53e-14!42;UBERON:0004572!3.53e-14!42;UBERON:0002619!3.94e-14!22;UBERON:0002049!1.44e-13!79;UBERON:0007798!1.44e-13!79;UBERON:0000922!1.91e-13!612;UBERON:0001950!3.79e-13!20;UBERON:0000055!2.47e-12!69;UBERON:0001981!2.52e-12!60;UBERON:0007500!2.52e-12!60;UBERON:0004537!2.52e-12!60;UBERON:0006965!2.52e-12!60;UBERON:0000923!2.78e-12!604;UBERON:0005291!2.78e-12!604;UBERON:0006598!2.78e-12!604;UBERON:0002532!2.78e-12!604;UBERON:0002050!2.96e-12!605;UBERON:0005423!2.96e-12!605;UBERON:0004573!6.50e-12!33;UBERON:0004571!6.50e-12!33;UBERON:0000481!3.74e-11!347;UBERON:0004872!4.14e-10!84;UBERON:0001009!6.75e-09!113;UBERON:0004535!1.42e-08!110;UBERON:0000947!4.84e-08!21;UBERON:0010191!4.84e-08!21;UBERON:0003914!5.44e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.49e-21;32!UBERON:0001893;1.46e-20;34!UBERON:0002791;2.24e-20;32!UBERON:0003528;4.15e-20;34!UBERON:0002020;4.15e-20;34!UBERON:0000956;8.81e-19;25!UBERON:0000203;8.81e-19;25!UBERON:0002780;1.41e-17;41!UBERON:0001890;1.41e-17;41!UBERON:0002619;1.22e-16;22!UBERON:0000073;7.28e-16;53!UBERON:0002616;7.28e-16;53!UBERON:0001950;1.82e-15;20!UBERON:0001017;3.09e-15;75!UBERON:0000955;3.98e-15;68!UBERON:0004573;1.14e-12;33!UBERON:0004571;1.14e-12;33!UBERON:0001016;3.08e-12;83!UBERON:0001637;3.43e-12;42!UBERON:0003509;3.43e-12;42!UBERON:0004572;3.43e-12;42!UBERON:0000947;2.48e-09;21!UBERON:0010191;2.48e-09;21!UBERON:0007500;1.01e-07;56!UBERON:0001981;1.01e-07;56!UBERON:0004537;1.01e-07;56!UBERON:0002049;1.77e-07;75!UBERON:0007798;1.77e-07;75!UBERON:0000055;8.08e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.24e-37,81;UBERON:0001016,1.87e-36,89;UBERON:0000955,1.22e-32,68;UBERON:0006238,1.22e-32,68;UBERON:0001049,2.43e-28,56;UBERON:0005068,2.43e-28,56;UBERON:0006241,2.43e-28,56;UBERON:0007135,2.43e-28,56;UBERON:0000073,6.94e-28,53;UBERON:0002616,6.94e-28,53;UBERON:0004111,1.25e-27,240;UBERON:0000025,3.19e-27,192;UBERON:0003075,7.81e-25,82;UBERON:0007284,7.81e-25,82;UBERON:0002780,3.25e-24,41;UBERON:0001890,3.25e-24,41;UBERON:0003080,3.25e-24,41;UBERON:0006240,3.25e-24,41;UBERON:0002346,1.74e-23,86;UBERON:0001893,3.36e-23,34;UBERON:0001869,5.19e-23,32;UBERON:0010314,9.00e-23,132;UBERON:0003528,1.13e-22,34;UBERON:0002020,1.13e-22,34;UBERON:0004121,1.50e-22,171;UBERON:0000924,1.50e-22,171;UBERON:0006601,1.50e-22,171;UBERON:0002791,4.24e-22,32;UBERON:0000483,1.45e-21,306;UBERON:0010371,4.77e-21,104;UBERON:0000119,9.24e-21,309;UBERON:0003056,1.16e-20,61;UBERON:0000956,1.11e-18,25;UBERON:0000203,1.11e-18,25;UBERON:0001637,1.33e-16,42;UBERON:0003509,1.33e-16,42;UBERON:0004572,1.33e-16,42;UBERON:0002619,1.52e-16,22;UBERON:0002049,6.41e-16,78;UBERON:0007798,6.41e-16,78;UBERON:0001950,2.26e-15,20;UBERON:0000055,6.44e-14,68;UBERON:0004573,6.70e-14,33;UBERON:0004571,6.70e-14,33;UBERON:0007500,1.56e-13,59;UBERON:0001981,1.56e-13,59;UBERON:0004537,1.56e-13,59;UBERON:0006965,1.56e-13,59;UBERON:0000922,4.48e-13,592;UBERON:0011216,2.81e-12,223;UBERON:0002050,3.81e-12,564;UBERON:0000923,4.37e-12,560;UBERON:0010316,4.37e-12,560;UBERON:0005291,4.37e-12,560;UBERON:0006598,4.37e-12,560;UBERON:0010317,4.37e-12,560;UBERON:0002532,4.37e-12,560;UBERON:0004872,1.93e-11,83;UBERON:0001009,2.10e-11,112;UBERON:0004535,5.20e-11,109;UBERON:0005423,9.01e-11,581;UBERON:0000947,2.74e-09,21;UBERON:0010191,2.74e-09,21;UBERON:0003914,7.57e-08,117 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.422863212287913,0,0,0.872338524100369,0,1.26343974685366,0.522371256399677,1.22866968250754,0,0.218441372130172,0,0.123766352960047,0,14.1188280754873,15.6700577286234,13.1455816269727,16.1017823600867,14.2820427369074,3.4680117511523,9.09018692286455,50.9500057093281,58.7191283562673,29.5025203047787,0,0,0.236132343941038,0,0.383829398097213,0.154816123316076,0.919421224478927,0,0.739508020333575,0.0774672005803016,0,0,0.553995408531877,0.401088894940283,0.434021741431704,0,0.32389366601898,0,0.436194716338694,0.755751887377619,0.242584061187816,0.232429036905685,0,0,3.45230870786581,2.30544635876191,2.60130452877444,0.344745680736619,0.645484683583826,1.35426486594342,0.564727018627814,0.545812300115692,0,0.612167784741805,0.320929027076094,2.55734850319616,0.989553900560148,0.398927315243264,0.426224750532694,0,0,0,2.26123798731069,1.5644487552606,0.434377689410233,1.21079900526674,0.736555271975129,0.316462387440884,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,1.23360899399706,0,0.651844533267181,0,0,0.222820913770347,0.589211814949674,0.664601683750863,0.541607727530031,0,0.130059347559878,0,0,0.289803085735052,0.296573126324121,0,0,0.113309342697566,0.383220493601921,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0.802320587350522,0.289648807765598,0,2.01210257911091,0.895037932904712,1.44575660953827,0,0.144846518960824,0.795285947051099,0,39.04287948876,11.5299286680533,14.5805744250589,10.936752804059,0.364295288292542,0,0.324547393654683,0,0.132957960518865,0,0,0,1.19257444420023,2.58070378531837,3.81854551768354,9.04492707078415,6.29249154314859,2.47606237746061,5.01587919688345,4.39308490587859,7.1153252537342,6.6944122552934,14.9046847330384,12.1643536914962,7.32186172644509,5.8826092855339,2.43042584364528,1.7859945656816,0.44905874525234,0.337834441449967,3.06633274931766,0,0.549605231791222,0,0,0,0.993943903390637,11.9032680964705,49.9182611665835,20.078563452417,18.0880874921162,2.80338800071154,4.2699598291882,2.4666754841716,1.24484414159907,1.0776853765575,4.08654757783647,4.23800797405808,4.60940739583999,0.468642863667593,0.624320153660641,1.71141546463335,0.747243402759005,1.05691048779388,0.323745888736263,0.842704840213491,0.204154171254893,0.491337269247072,0,0,0.247266929278557,0,0,0.336672227908132,0.500474079487857,0,0,1.22595118319608,0.45071417671979,12.5909723307623,1.61450672119976,0.213557388818567,0.211931901159562,1.20036438433761,1.03052529238439,0.257640540045629,0.37223371266318,0.843881661206331,0.584622030967192,0.252433774244115,0.368199594569197,0,0.355009592516614,0.806016785821122,0.508681776931463,3.47869535693934,3.27295344709002,9.17774705244812,5.85473789422058,1.19276791489337,1.62671520017326,7.46359596110667,8.07426722802011,0,0,0.643240938192885,2.76269842704961,0.464367928031979,1.44375896333917,0.118306800039844,0.168584690078102,0.241011029883482,0,0.217879444092406,0,0.404493924480493,0.196221465125346,0.38474715694639,0,1.40241773803446,0,0,0,0,0.590789906681404,3.97316789473185,0.245976877086227,6.6911446016425,0.98775256867763,0,0.804231779293047,1.29623823221941,0.325808305310325,0,7.21656710126366,90.1938550706098,2.46558257895225,7.65142173133691,4.62985512576611,6.46864117597634,0,0.858486162094873,0.246217006087397,0.234004265139238,0.148631162288728,0,1.84780341018745,4.53680311175637,1.52249488594842,2.3250715081117,1.53353071666084,2.95597942737566,0.088048434013226,0,0.144119953416961,0,0.190493682876507,0,0,0,0.102827492703324,0.600686115687835,0,0.672786506072164,0.87192013766656,0.66004457238855,20.4249310897289,0,0.845302752556,0.531876233169741,0,0.257207374262142,1.41849132023278,0,0.142977993658148,0,0,0.325736184293735,0,3.16780749173372,8.13886318060882,20.0452695478068,3.29910870900788,0,0,2.10833939483032,0,0,4.27910715122155,2.46128221334885,2.05476322550383,1.43248770591916,0,0,0,0.128343036279748,13.9752043322355,13.0139853857622,11.5993321916654,14.0713662880853,14.6725912880228,0,0,0,0,0,0,0.415941723061614,0.892144943985809,0.157702415033935,1.05427273493442,0.601892199455438,2.27407504055985,0,1.32845119707087,0.553107505625109,2.25897397617015,0.195801157462741,0,0,0.215714200818617,0.320182673410333,0,0,0,1.48864684691266,0.153461973288062,0.561320188866147,0.640695746278505,0,0.965123526861645,0,4.1636617326717,6.92490728721196,3.03870477251094,2.59627214591811,3.48631135379878,0.483437798366489,3.40860999515584,1.28913384510255,22.8480751847567,2.54927635209404,1.04899531967539,1.80479845162965,0.693138033939733,0,0,1.89992932007176,0,1.53084334748864,1.29549549661284,0,0.541892875087706,0,0,0.831076008928724,0.895499018888713,0,0,1.28225062558195,0.328014645699706,2.60302715731442,0.309123034943167,0.732555718546747,0.660075999364704,0,0.650060246036521,3.21367859688319,0.096670718292122,1.23238893691716,0.614014698904518,1.10269257987624,0.322260734604821,0.290033387828457,0.511359764496605,0.801288320820636,0.495854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| |||
|short_description=p2@PDP1 | |||
}} |
Revision as of 22:54, 22 January 2014
Short description: | p2@PDP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PDP1_5end |
Coexpression cluster: | C2932_occipital_astrocytoma_gall_medial_postcentral_parietal_brain |
Association with transcript: | 42bp_to_NM_001161778, uc011lgn.1_5end |
EntrezGene: | PDP1 |
HGNC: | 9279 |
UniProt: | B4DYX8Q9P0J1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.81e-13 | 250 |
vascular associated smooth muscle cell | 2.06e-11 | 32 |
neural cell | 4.28e-10 | 25 |
smooth muscle cell | 1.37e-09 | 43 |
smooth muscle myoblast | 1.37e-09 | 43 |
mesodermal cell | 1.52e-09 | 121 |
electrically responsive cell | 2.60e-08 | 61 |
electrically active cell | 2.60e-08 | 61 |
squamous epithelial cell | 2.26e-07 | 63 |
glial cell (sensu Vertebrata) | 2.49e-07 | 15 |
glial cell | 2.49e-07 | 15 |
glioblast | 2.49e-07 | 15 |
glioblast (sensu Vertebrata) | 2.49e-07 | 15 |
neuron associated cell | 3.77e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 3.77e-07 | 17 |
neurectodermal cell | 5.22e-07 | 59 |
muscle precursor cell | 5.88e-07 | 58 |
myoblast | 5.88e-07 | 58 |
multi-potent skeletal muscle stem cell | 5.88e-07 | 58 |