FFCP PHASE1:Hg19::chr8:55467072..55467091,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-51bp_to_ENST00000518787_5end | |||
|coexpression_cluster_id=C429 | |||
|description=CAGE_peak_1_at_ENST00000518787_5end | |||
|id=chr8:55467072..55467091,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.73e-16!254 | |||
|ontology_enrichment_celltype_v019=CL:0000319;7.49e-08;1!CL:1001319;1.68e-07;1!CL:1000600;1.68e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.37e-08,253;CL:0000319,8.28e-08,1;CL:1001319,9.44e-08,1;CL:1000600,9.44e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.68e-08!106;DOID:0050687!5.94e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:4468;2.28e-14;2!DOID:299;6.04e-09;25!DOID:3030;7.49e-08;1!DOID:0060085;1.68e-07;1!DOID:3165;1.68e-07;1!DOID:0060121;1.68e-07;1!DOID:2438;1.68e-07;1!DOID:4418;1.68e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,2.37e-14,2;DOID:305,4.35e-09,106;DOID:299,6.14e-09,25;DOID:0050687,3.34e-08,143;DOID:3030,8.28e-08,1;DOID:0060085,1.69e-07,1;DOID:3165,1.69e-07,1;DOID:0060121,1.69e-07,1;DOID:2438,1.69e-07,1;DOID:4418,1.69e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000020!2.07e-07!23;UBERON:0001032!6.26e-07!24;UBERON:0004456!6.26e-07!24;UBERON:0000970!9.63e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002075;1.66e-08;18!UBERON:0004913;7.49e-08;1!UBERON:0003703;7.49e-08;1!UBERON:0001174;7.49e-08;1!UBERON:0004914;7.49e-08;1!UBERON:0007029;1.68e-07;1!UBERON:0004645;1.68e-07;1!UBERON:0001256;1.68e-07;1!UBERON:0001259;1.68e-07;1!UBERON:0000014;4.33e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002075,1.65e-08,18;UBERON:0004913,6.80e-08,1;UBERON:0003703,6.80e-08,1;UBERON:0001174,6.80e-08,1;UBERON:0004914,6.80e-08,1;UBERON:0004645,9.44e-08,1;UBERON:0001256,9.44e-08,1;UBERON:0001259,9.44e-08,1;UBERON:0007029,1.30e-07,1;UBERON:0000014,3.83e-07,4 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,1.5905718941022,0.973269740605272,0.0945348171640679,0.665188192387692,0.702678285545008,0.130979075497713,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0.258416759169329,0.71153252537342,0,0,0.760272105718513,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.25326102332916,0,0.860509862246441,0,0,0,0.98667019366864,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,1.09098448236334,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0.435758888184812,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0.219500570817251,1.1240175325762,1.00528972411631,0.740707561268237,0,0,0,0.115930404975077,0.469634776943287,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0,1.70161193135412,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.399891964728228,0,0,0,0,0,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601892199455438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232420756919918,0,0.802025881213139,0.368323955743585,0,0,0,0,0.0770153371044148,0,1.46139224653261,0.73886140225013,0,0,0,0,0.541892875087706,0,0.254876273045038,0.831076008928724,0,0,0,0.256450125116389,1.31205858279882,0.325378394664303,0.103041011647722,0,0,0,0,0,0.193341436584244,0.154048617114644,0,0,0,0,0.0852266274161009,0,0.991709492165869,1.92190067365106,0,0.10115778085555,0,0,0,0,0,0.869932992075073,0.55597265731176,0.858749320451947,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.405820753925408,0.30982349809975,0.281695602532241,0,0,0,0,0.211107635297664,0,0,0,0.192444225451024,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0.284136146806413,0,0,0,0,0,15.1379838831152,0,0,0,0,0,0.102268682502155,0,0,0.898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.59593032300897,4.08082020397869,0.141353071433941,0,0,0,0,0.296521128680622,0.247127877893006,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,1.32930774541437,1.323967823502,0.941798755221676,1.19472429772959,0,0.138674673013139,0,0.0979923974143777,0,0.17472666824203,0.171986032471617,0.0967563312890851,0.292357268344742,0.164230914106418,0,0,0.90392296312213,0.959293472527256,1.39100228192093,0.0633107959558787,0,3.52698809106748,0,0.19980960958213,0,0.114536596165916,0,0,0.124252535565433,0,0.67952103036807,0.523014231561666,0.407992870545287,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.394028536495991,0,0.844802692155252,0,0.575745591958336,0,0,0,0,0,0.653174720218818,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.213574825135389,0.314408610199332,0.414239055347196,0,0,0,1.27668251554036,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0.228840068396924,0,0,0.147855149989634,0.159296767163702,0,0.465788870628778,0,0,0,0.150257608997218,0,0,0,0.644463342254931,0.464033759878494,0,0,0.343395705182793,0,0,0.192619830407303,0.428883182749851,0.260994291965212,0.226705925512272,0.463044948647668,0,0.179088841081487,0.308801447160972,0,0,0.578742114812744,0,0,0,0,0,0,0,0,0.982829546539238,2.21195617878347,0.845248493434508,0,0,0,0,0,0.559518030877778,0.622077260032973,0,0,0.157265941855896,0,0,0.425149840203366,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0.550285795565037,0.231051332300676,0.381382095467167,0,0.198916222116275,0.376051641746286,1.41193548092464,0,0,0.49131575253029,2.51355346568977,0.0675375846183947,0,0,0,0,0,0.496211178389294,1.58284119923659,0,0,0,0,0,0,0,0.685952037749674,0.0679697329768317,0,0.827356886187777,0,0,0,0,0,2.37520350340484,3.8220135030964,0.78624198594322,0,0,0,0.801711364730253,1.45051314914126,0.17071847709395,0,0,0,0,0,2.2910686854405,0.31020638566432,0,0,0,5.36438869921985,0,0,0,1.45713297917742,0,0,0,0.22589216407792,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0.0644578879735772,0,0.357107877211315,1.41157948686277,0.0802413666891683,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0.760191006068622,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0.0645889098360061,0.31037357147929,4.59740636580515,0,0,0,0.342233301085281,0.0673520530145875,0.0717222053926763,0,1.79087190944144,0,0,0,0,0.244482888365733,0.813792356631477,0,0,0 | |||
|short_description=p1@ENST00000518787 | |||
}} |
Revision as of 22:04, 22 January 2014
Short description: | p1@ENST00000518787 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000518787_5end |
Coexpression cluster: | C429_anaplastic_Mast_clear_Neutrophils_squamous_Eosinophils_oral |
Association with transcript: | -51bp_to_ENST00000518787_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.37e-08 | 253 |
mucus secreting cell | 8.28e-08 | 1 |
bladder cell | 9.44e-08 | 1 |
lower urinary tract cell | 9.44e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
viscus | 1.65e-08 | 18 |
hepatopancreatic ampulla | 6.80e-08 | 1 |
extrahepatic bile duct | 6.80e-08 | 1 |
common bile duct | 6.80e-08 | 1 |
duodenal papilla | 6.80e-08 | 1 |
urinary bladder urothelium | 9.44e-08 | 1 |
wall of urinary bladder | 9.44e-08 | 1 |
mucosa of urinary bladder | 9.44e-08 | 1 |
surface | 1.30e-07 | 1 |
zone of skin | 3.83e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 2.37e-14 | 2 |
carcinoma | 4.35e-09 | 106 |
adenocarcinoma | 6.14e-09 | 25 |
cell type cancer | 3.34e-08 | 143 |
mucinous adenocarcinoma | 8.28e-08 | 1 |
organ system benign neoplasm | 1.69e-07 | 1 |
skin benign neoplasm | 1.69e-07 | 1 |
integumentary system benign neoplasm | 1.69e-07 | 1 |
dermis tumor | 1.69e-07 | 1 |
cutaneous fibrous histiocytoma | 1.69e-07 | 1 |