FFCP PHASE1:Hg19::chr8:11705244..11705269,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1508 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2527 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=70bp_to_ENST00000526481_5end | |||
|coexpression_cluster_id=C71 | |||
|description=CAGE_peak_6_at_CTSB_5end | |||
|id=chr8:11705244..11705269,- | |||
|ontology_enrichment_celltype=CL:0002194!2.98e-14!63;CL:0000576!2.98e-14!63;CL:0000040!2.98e-14!63;CL:0000559!2.98e-14!63;CL:0002371!1.58e-13!591;CL:0002009!3.68e-13!65;CL:0000839!9.24e-13!70;CL:0002057!2.68e-12!42;CL:0000144!3.77e-12!625;CL:0000557!2.12e-11!71;CL:0000048!2.77e-11!430;CL:0000860!6.93e-11!45;CL:0000723!1.46e-10!436;CL:0000055!4.52e-10!180;CL:0000766!7.17e-10!76;CL:0000034!2.00e-09!444;CL:0000057!1.70e-08!75;CL:0002320!5.46e-07!365;CL:0000134!6.20e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.47e-18;39!CL:0000234;1.47e-18;39!CL:0000860;3.20e-17;33!CL:0002057;3.20e-17;33!CL:0000576;2.05e-10;48!CL:0000235;6.49e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.07e-20,59;CL:0000576,1.07e-20,59;CL:0000040,1.07e-20,59;CL:0000559,1.07e-20,59;CL:0002009,2.37e-19,61;CL:0000473,6.96e-19,48;CL:0000234,6.96e-19,48;CL:0000839,3.78e-17,66;CL:0000557,1.34e-16,67;CL:0000048,1.35e-15,427;CL:0000723,4.05e-15,433;CL:0000766,4.87e-15,72;CL:0000860,2.94e-14,42;CL:0002057,2.94e-14,42;CL:0000034,9.02e-14,441;CL:0000134,9.72e-12,354;CL:0002320,1.15e-11,361;CL:0000219,1.61e-09,386;CL:0000057,1.17e-07,76;CL:0000235,7.09e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;5.56e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.01e-15!167;UBERON:0003081!1.27e-14!216;UBERON:0000926!3.35e-13!448;UBERON:0004120!3.35e-13!448;UBERON:0006603!3.35e-13!448;UBERON:0002371!8.28e-12!80;UBERON:0000468!2.16e-11!659;UBERON:0004765!5.35e-11!101;UBERON:0001434!5.35e-11!101;UBERON:0001474!9.35e-10!86;UBERON:0002405!1.01e-09!115;UBERON:0000467!1.20e-09!625;UBERON:0000480!2.06e-09!626;UBERON:0002390!7.67e-08!102;UBERON:0003061!7.67e-08!102;UBERON:0002193!1.72e-07!112;UBERON:0002384!5.16e-07!375;UBERON:0000914!8.09e-07!83;UBERON:0002329!8.09e-07!83;UBERON:0003077!8.09e-07!83;UBERON:0003059!8.09e-07!83;UBERON:0007282!8.09e-07!83;UBERON:0009618!8.09e-07!83;UBERON:0007285!8.09e-07!83 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,3.96e-22,315;UBERON:0004120,3.96e-22,315;UBERON:0006603,3.96e-22,315;UBERON:0002204,1.89e-19,167;UBERON:0003081,5.22e-17,203;UBERON:0002371,1.09e-16,76;UBERON:0001434,5.58e-16,100;UBERON:0004765,2.21e-15,90;UBERON:0001474,8.78e-15,82;UBERON:0002384,8.71e-12,371;UBERON:0002405,1.31e-11,93;UBERON:0002390,1.48e-11,98;UBERON:0003061,1.48e-11,98;UBERON:0002193,4.69e-10,108 | |||
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| |||
|short_description=p6@CTSB | |||
}} |
Revision as of 20:42, 22 January 2014
Short description: | p6@CTSB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CTSB_5end |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | 70bp_to_ENST00000526481_5end |
EntrezGene: | CTSB |
HGNC: | 2527 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.07e-20 | 59 |
monocyte | 1.07e-20 | 59 |
monoblast | 1.07e-20 | 59 |
promonocyte | 1.07e-20 | 59 |
macrophage dendritic cell progenitor | 2.37e-19 | 61 |
defensive cell | 6.96e-19 | 48 |
phagocyte | 6.96e-19 | 48 |
myeloid lineage restricted progenitor cell | 3.78e-17 | 66 |
granulocyte monocyte progenitor cell | 1.34e-16 | 67 |
multi fate stem cell | 1.35e-15 | 427 |
somatic stem cell | 4.05e-15 | 433 |
myeloid leukocyte | 4.87e-15 | 72 |
classical monocyte | 2.94e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.94e-14 | 42 |
stem cell | 9.02e-14 | 441 |
mesenchymal cell | 9.72e-12 | 354 |
connective tissue cell | 1.15e-11 | 361 |
motile cell | 1.61e-09 | 386 |
fibroblast | 1.17e-07 | 76 |
macrophage | 7.09e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 3.96e-22 | 315 |
mesoderm-derived structure | 3.96e-22 | 315 |
presumptive mesoderm | 3.96e-22 | 315 |
musculoskeletal system | 1.89e-19 | 167 |
lateral plate mesoderm | 5.22e-17 | 203 |
bone marrow | 1.09e-16 | 76 |
skeletal system | 5.58e-16 | 100 |
skeletal element | 2.21e-15 | 90 |
bone element | 8.78e-15 | 82 |
connective tissue | 8.71e-12 | 371 |
immune system | 1.31e-11 | 93 |
hematopoietic system | 1.48e-11 | 98 |
blood island | 1.48e-11 | 98 |
hemolymphoid system | 4.69e-10 | 108 |