FFCP PHASE1:Hg19::chr8:2066860..2066887,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9172 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7614 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-159bp_to_ENST00000519631_5end | |||
|coexpression_cluster_id=C1995 | |||
|description=CAGE_peak_4_at_MYOM2_5end | |||
|id=chr8:2066860..2066887,+ | |||
|ontology_enrichment_celltype=CL:0000625!1.97e-14!11;CL:0000838!1.70e-09!52;CL:0000738!2.57e-09!140;CL:0000542!3.10e-09!53;CL:0000051!3.10e-09!53;CL:0000767!1.51e-08!3;CL:0000791!3.77e-08!18;CL:0000789!3.77e-08!18;CL:0002420!3.77e-08!18;CL:0002419!3.77e-08!18;CL:0000790!3.77e-08!18;CL:0000623!1.69e-07!3;CL:0000825!1.69e-07!3;CL:0002087!3.19e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000625;1.21e-25;11!CL:0000791;3.88e-15;18!CL:0000789;3.88e-15;18!CL:0002419;3.88e-15;18!CL:0000767;3.77e-14;3!CL:0000084;1.63e-10;25!CL:0000542;1.52e-08;53!CL:0000236;5.95e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.17e-25,11;CL:0000791,3.81e-15,18;CL:0000789,3.81e-15,18;CL:0002420,3.81e-15,18;CL:0002419,3.81e-15,18;CL:0000790,3.81e-15,18;CL:0000767,3.77e-14,3;CL:0000838,1.12e-13,52;CL:0000542,2.32e-13,53;CL:0000051,2.32e-13,53;CL:0000084,1.61e-10,25;CL:0000827,1.61e-10,25;CL:0000738,3.28e-08,136;CL:0000236,2.32e-07,14;CL:0002087,4.20e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000790;3.88e-15;18!CL:0000051;1.52e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.89e-30!115;UBERON:0001950!8.34e-22!20;UBERON:0002619!1.49e-19!22;UBERON:0000178!6.81e-19!15;UBERON:0000179!6.81e-19!15;UBERON:0000463!6.81e-19!15;UBERON:0001893!5.22e-17!34;UBERON:0000956!7.86e-17!25;UBERON:0000203!7.86e-17!25;UBERON:0001869!2.35e-16!32;UBERON:0002791!1.52e-15!33;UBERON:0002020!5.72e-15!34;UBERON:0003528!5.72e-15!34;UBERON:0000200!3.88e-14!6;UBERON:0002780!2.29e-13!41;UBERON:0001890!2.29e-13!41;UBERON:0006240!2.29e-13!41;UBERON:0003080!6.04e-13!42;UBERON:0001049!2.01e-08!57;UBERON:0005068!2.01e-08!57;UBERON:0006241!2.01e-08!57;UBERON:0007135!2.01e-08!57;UBERON:0002616!5.34e-08!59;UBERON:0000955!6.71e-08!69;UBERON:0006238!6.71e-08!69;UBERON:0002771!8.48e-08!3;UBERON:0001872!9.10e-08!5;UBERON:0002021!9.27e-08!5;UBERON:0003056!1.33e-07!61;UBERON:0001017!9.29e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.55e-34;15!UBERON:0000179;5.55e-34;15!UBERON:0000463;5.55e-34;15!UBERON:0001950;7.80e-18;20!UBERON:0000200;3.43e-17;6!UBERON:0002619;4.03e-16;22!UBERON:0000956;4.79e-14;25!UBERON:0000203;4.79e-14;25!UBERON:0002390;7.22e-14;32!UBERON:0001869;1.75e-13;32!UBERON:0001893;2.79e-13;34!UBERON:0003528;1.07e-11;34!UBERON:0002020;1.07e-11;34!UBERON:0002791;4.66e-11;32!UBERON:0002771;2.66e-09;2!UBERON:0001872;7.26e-08;5!UBERON:0002780;8.39e-08;41!UBERON:0001890;8.39e-08;41!UBERON:0002193;9.84e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.98e-34,15;UBERON:0000179,4.98e-34,15;UBERON:0000463,4.98e-34,15;UBERON:0001950,6.15e-18,20;UBERON:0000200,2.46e-17,6;UBERON:0002619,3.25e-16,22;UBERON:0007023,7.00e-16,114;UBERON:0001869,1.59e-15,32;UBERON:0001893,1.69e-14,34;UBERON:0000956,3.96e-14,25;UBERON:0000203,3.96e-14,25;UBERON:0002791,5.38e-13,32;UBERON:0003528,3.94e-12,34;UBERON:0002020,3.94e-12,34;UBERON:0002780,1.12e-11,41;UBERON:0001890,1.12e-11,41;UBERON:0003080,1.12e-11,41;UBERON:0006240,1.12e-11,41;UBERON:0002771,2.19e-09,2;UBERON:0000073,1.48e-08,53;UBERON:0002616,1.48e-08,53;UBERON:0001049,5.51e-08,56;UBERON:0005068,5.51e-08,56;UBERON:0006241,5.51e-08,56;UBERON:0007135,5.51e-08,56;UBERON:0001872,7.09e-08,5;UBERON:0003056,3.70e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.9430634080415,9.97956435052753,7.27635779585557,0,0,0,0,0,0,8.30993112797816,0.200544447470142,0,0,0.971680998056939,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,2.73069305631066,0,0,1.20118796110804,2.87376219977242,0.661044872784862,2.86216126360609,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.2552752456591,17.5792532541233,21.8603970223126,50.1415146528983,57.7219616306427,37.4792179657038,36.9372513188666,41.0563998460523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0.132957960518865,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.3170748464433,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89475236572042,0,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,31.4617517723945,25.2330278356984,29.6216537330565,36.9259251959573,36.6112423046713,23.9935125141305,30.2417604853344,36.4837581095364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.1328020051022,0,0.969332746095218,0.927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09692698576986,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,1.83601308272048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,1.57948847310864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533937062838473,1.10043013569766,2.48543433208317,0,0,0,0,1.08803560673895,0,0,0,0,4.43034089983493,2.92863035764712,0.751145584238999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,1.09189682663981,2.8339315265117,0.638535436228605,0.82046545696302,0,2.00556032146232,1.77623210195036,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,1.35075169236789,1.56215619722769,0.826747186004736,1.07806877329642,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,1.77586488619693,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0.815897882290976,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0.665756774185513,0.402547587182052,0 | |||
|short_description=p4@MYOM2 | |||
}} |
Revision as of 20:28, 22 January 2014
Short description: | p4@MYOM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MYOM2_5end |
Coexpression cluster: | C1995_CD8_Natural_Whole_Basophils_blood_NK_CD14 |
Association with transcript: | -159bp_to_ENST00000519631_5end |
EntrezGene: | MYOM2 |
HGNC: | 7614 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.17e-25 | 11 |
mature alpha-beta T cell | 3.81e-15 | 18 |
alpha-beta T cell | 3.81e-15 | 18 |
immature T cell | 3.81e-15 | 18 |
mature T cell | 3.81e-15 | 18 |
immature alpha-beta T cell | 3.81e-15 | 18 |
basophil | 3.77e-14 | 3 |
lymphoid lineage restricted progenitor cell | 1.12e-13 | 52 |
lymphocyte | 2.32e-13 | 53 |
common lymphoid progenitor | 2.32e-13 | 53 |
T cell | 1.61e-10 | 25 |
pro-T cell | 1.61e-10 | 25 |
leukocyte | 3.28e-08 | 136 |
B cell | 2.32e-07 | 14 |
nongranular leukocyte | 4.20e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
blood | 4.98e-34 | 15 |
haemolymphatic fluid | 4.98e-34 | 15 |
organism substance | 4.98e-34 | 15 |
neocortex | 6.15e-18 | 20 |
gyrus | 2.46e-17 | 6 |
regional part of cerebral cortex | 3.25e-16 | 22 |
adult organism | 7.00e-16 | 114 |
cerebral hemisphere | 1.59e-15 | 32 |
telencephalon | 1.69e-14 | 34 |
cerebral cortex | 3.96e-14 | 25 |
pallium | 3.96e-14 | 25 |
regional part of telencephalon | 5.38e-13 | 32 |
brain grey matter | 3.94e-12 | 34 |
gray matter | 3.94e-12 | 34 |
regional part of forebrain | 1.12e-11 | 41 |
forebrain | 1.12e-11 | 41 |
anterior neural tube | 1.12e-11 | 41 |
future forebrain | 1.12e-11 | 41 |
middle temporal gyrus | 2.19e-09 | 2 |
regional part of nervous system | 1.48e-08 | 53 |
regional part of brain | 1.48e-08 | 53 |
neural tube | 5.51e-08 | 56 |
neural rod | 5.51e-08 | 56 |
future spinal cord | 5.51e-08 | 56 |
neural keel | 5.51e-08 | 56 |
parietal lobe | 7.09e-08 | 5 |
pre-chordal neural plate | 3.70e-07 | 61 |