FFCP PHASE1:Hg19::chr7:156518511..156518549,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=64327 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13243 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=247bp_to_ENST00000486837_5end | |||
|coexpression_cluster_id=C194 | |||
|description=CAGE_peak_5_at_LMBR1_5end | |||
|id=chr7:156518511..156518549,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002581;5.97e-34;1!CL:0002615;2.74e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,3.61e-34,1;CL:0002615,3.24e-12,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;4.28e-34;4!DOID:1612;4.28e-34;4!DOID:0060084;2.74e-12;3!DOID:127;2.74e-12;3!DOID:0060072;1.50e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,4.28e-34,4;DOID:1612,4.28e-34,4;DOID:0060084,2.89e-12,3;DOID:127,2.89e-12,3;DOID:0060072,1.57e-09,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;9.86e-18;2!UBERON:0000310;2.49e-14;10!UBERON:0001443;4.00e-13;11!UBERON:0003688;8.72e-07;6!UBERON:0002358;8.72e-07;6!UBERON:0003684;8.72e-07;6!UBERON:0001178;8.72e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,7.67e-18,2;UBERON:0000310,2.49e-14,10;UBERON:0001443,4.00e-13,11;UBERON:0003688,9.49e-07,6;UBERON:0002358,9.49e-07,6;UBERON:0003684,9.49e-07,6;UBERON:0001178,9.49e-07,6 | |||
|phase1_expression=0,0,0,1.0007329835313,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0.331397375727916,1.34465029290355,0,0,0,0,0,0,0.286235987131057,0,0,0.0764134057479513,0,0,0,0,0,0,0,0.369754010166788,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0.370784442784429,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0.408308342509787,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0.132529768321485,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0.721879481669586,0,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.761016608938393,13.4334747653077,18.0282094039923,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0.205654985406647,0,0.285826432630578,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0.248107807818777,0,0,0,0,0,1.48418066444991,0.462629081407967,0,0,0,0,0,0.40101294060657,0,0,0,0.262248829918848,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0.107420244868274,0,0.170453254832202,0.0890320356467374,0,0.192190067365106,0,0,0.464845549297286,0.62962469366128,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,0,0.422215270595328,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0.106824071127473,0.962479855263359,0,0,0,0.0711418433484141,0.159426272728822,0.199579371432817,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0.307160702099232,0.994147647766298,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0,0.886642856860642,0,0,0,0.230850775511391,0,0,0,0.108647371922008,0.638002319463839,0.0915975934018623,0,0,0.156980256395025,0.166211681900156,0.225595660617181,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0.104421949505455,0.067401132980677,0.802577647298789,0,0.182454789215666,0,0.242780379534093,0.394584402849391,0,0.30607276163049,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0.277349346026277,0.173559738335131,0,0,0,0,0.0967563312890851,0,0.164230914106418,0,0.0882561266915003,0.677942222341597,0,0,0,0,0,0.213452994739353,0.39961921916426,0,0,0.343189995723929,0,0,0,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0.223171457441873,0.201550417460179,0,0,0.157566364614447,0.164831716762333,0,0,0,0,0.272406812223151,0,0.137539436597234,0.415440338029185,0,0,0.0607495566580247,0.335434687599266,0,0.0524545881349981,0.105600336519406,0.179287339332845,0,0,0,0,1.08599920350743,0.864221491201268,0.326587360109409,0,0.246277562248017,0,0.339936274560377,0,0,0.129282956361551,0,0.171086837884329,0,0,0.314408610199332,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0.610131324509816,0,0,0,0,0,0,0.454947352624943,0.285465333544967,0,0.468334905806882,0.434763085832475,0.298509605773748,0,0.554805861502613,0,0,0,0.228840068396924,0.151230923763239,0.310874401165561,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0,0,0.181848659202559,0.214821114084977,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.41023272848151,0.252071696221718,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0.202612753855184,0,0.206686796501184,0,0.546974809018219,0,0.496211178389294,0,0,0,0.336283722218824,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0,0.549451649953598,0.157115589916002,0,0.913158720509496,0,0,0,0,0.116241425368125,0,0,0.207216164163037,0,0.691259661814092,0,0,0.0852134047591577,0,0,0.31020638566432,0,0.223710863595585,0,0.121917924982269,0,0,0,0,0,0.198950775161368,0.118920090777569,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0.196308467114945,0,0.4226557275834,0.339854229375634,0.09398391797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| |||
|short_description=p5@LMBR1 | |||
}} |
Revision as of 20:20, 22 January 2014
Short description: | p5@LMBR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_LMBR1_5end |
Coexpression cluster: | C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar |
Association with transcript: | 247bp_to_ENST00000486837_5end |
EntrezGene: | LMBR1 |
HGNC: | 13243 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 3.61e-34 | 1 |
adipocyte of omentum tissue | 3.24e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 7.67e-18 | 2 |
breast | 2.49e-14 | 10 |
chest | 4.00e-13 | 11 |
omentum | 9.49e-07 | 6 |
peritoneum | 9.49e-07 | 6 |
abdominal cavity | 9.49e-07 | 6 |
visceral peritoneum | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 4.28e-34 | 4 |
breast cancer | 4.28e-34 | 4 |
cell type benign neoplasm | 2.89e-12 | 3 |
leiomyoma | 2.89e-12 | 3 |
benign neoplasm | 1.57e-09 | 4 |