FFCP PHASE1:Hg19::chr7:93516601..93516634,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C378 | |||
|description=CAGE_peak_at_chr7:93516601..93516634,+ | |||
|id=chr7:93516601..93516634,+ | |||
|ontology_enrichment_celltype=CL:0000359!2.61e-24!32;CL:0000192!5.28e-24!42;CL:0000514!5.28e-24!42;CL:0000680!5.47e-24!57;CL:0000056!5.47e-24!57;CL:0000355!5.47e-24!57;CL:0000183!1.68e-23!59;CL:0000187!2.27e-23!54;CL:0000393!1.33e-20!60;CL:0000211!1.33e-20!60;CL:0000055!1.82e-20!180;CL:0000222!2.24e-17!119;CL:0002371!2.68e-12!591;CL:0000144!7.05e-12!625;CL:0000548!2.93e-11!679;CL:0000004!2.93e-11!679;CL:0000255!2.93e-11!679;CL:0000012!5.59e-11!682;CL:0000048!4.00e-09!430;CL:0000723!6.50e-09!436;CL:0002539!1.14e-08!10;CL:0000034!1.74e-08!444;CL:0000220!2.65e-08!246;CL:0002321!4.50e-08!248;CL:0000003!1.71e-07!722;CL:0000057!1.85e-07!75;CL:0002595!2.20e-07!5;CL:0002494!2.22e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.68e-34;32!CL:0000192;1.28e-24;43!CL:0002494;9.63e-14;16!CL:0002595;1.17e-13;5!CL:0000187;5.71e-13;55!CL:0000393;1.31e-11;61!CL:0000211;1.31e-11;61!CL:0002539;4.42e-11;10!CL:0002594;1.92e-09;4!CL:0002592;2.34e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.43e-35,32;CL:0000192,5.06e-35,43;CL:0000514,5.06e-35,43;CL:0000680,5.90e-28,58;CL:0000056,5.90e-28,58;CL:0000355,5.90e-28,58;CL:0000187,8.14e-28,55;CL:0000393,2.83e-24,61;CL:0000211,2.83e-24,61;CL:0002494,1.09e-13,16;CL:0002595,1.24e-13,5;CL:0000222,5.67e-13,121;CL:0000048,1.03e-11,427;CL:0000723,2.57e-11,433;CL:0002539,3.84e-11,10;CL:0000034,8.29e-11,441;CL:0002594,1.23e-09,4;CL:0002592,2.68e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000514;1.28e-24;43!CL:0000355;4.74e-14;58!UBERON:0005795;1.64e-08;10 | |||
|ontology_enrichment_disease=DOID:2394!3.75e-11!14;DOID:120!7.60e-08!27;DOID:193!5.72e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.24e-16;14!DOID:120;9.30e-13;27!DOID:193;1.18e-11;29!DOID:0060072;4.39e-11;4!DOID:0060084;6.29e-09;3!DOID:127;6.29e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.45e-16,14;DOID:120,1.14e-12,27;DOID:193,1.42e-11,29;DOID:0060072,5.00e-11,4;DOID:0060084,6.72e-09,3;DOID:127,6.72e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0001637!2.24e-29!42;UBERON:0003509!2.24e-29!42;UBERON:0004572!2.24e-29!42;UBERON:0001981!4.26e-26!60;UBERON:0007500!4.26e-26!60;UBERON:0004537!4.26e-26!60;UBERON:0006965!4.26e-26!60;UBERON:0004872!5.74e-26!84;UBERON:0004573!3.82e-23!33;UBERON:0004571!3.82e-23!33;UBERON:0000055!5.71e-23!69;UBERON:0002049!2.40e-22!79;UBERON:0007798!2.40e-22!79;UBERON:0001134!2.03e-21!61;UBERON:0002036!2.03e-21!61;UBERON:0003082!2.03e-21!61;UBERON:0002385!2.89e-20!63;UBERON:0001015!2.89e-20!63;UBERON:0000383!2.89e-20!63;UBERON:0004290!4.13e-19!70;UBERON:0003914!4.99e-19!118;UBERON:0000914!1.26e-18!83;UBERON:0002329!1.26e-18!83;UBERON:0003077!1.26e-18!83;UBERON:0003059!1.26e-18!83;UBERON:0007282!1.26e-18!83;UBERON:0009618!1.26e-18!83;UBERON:0007285!1.26e-18!83;UBERON:0004535!1.46e-18!110;UBERON:0000486!9.61e-18!82;UBERON:0001009!1.46e-17!113;UBERON:0000490!4.16e-17!138;UBERON:0005256!2.11e-14!143;UBERON:0000947!2.95e-11!21;UBERON:0010191!2.95e-11!21;UBERON:0000483!1.90e-09!309;UBERON:0000119!1.92e-09!312;UBERON:0001135!2.13e-09!15;UBERON:0002100!2.74e-09!216;UBERON:0004237!1.14e-08!10;UBERON:0004695!1.14e-08!10;UBERON:0002111!1.14e-08!10;UBERON:0004178!1.14e-08!10;UBERON:0000992!2.20e-08!13;UBERON:0000926!5.54e-08!448;UBERON:0004120!5.54e-08!448;UBERON:0006603!5.54e-08!448;UBERON:0003513!5.98e-08!8;UBERON:0003100!1.80e-07!41;UBERON:0003834!2.20e-07!5;UBERON:0001533!2.20e-07!5;UBERON:0000477!2.24e-07!286;UBERON:0004111!4.69e-07!241;UBERON:0003498!5.78e-07!5;UBERON:0005985!5.78e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;9.67e-21;42!UBERON:0003509;9.67e-21;42!UBERON:0004572;9.67e-21;42!UBERON:0004573;3.95e-20;33!UBERON:0004571;3.95e-20;33!UBERON:0000992;1.57e-14;13!UBERON:0003834;1.17e-13;5!UBERON:0001533;1.17e-13;5!UBERON:0003513;1.50e-13;7!UBERON:0007500;3.46e-12;56!UBERON:0001981;3.46e-12;56!UBERON:0004537;3.46e-12;56!UBERON:0003134;8.09e-12;33!UBERON:0001135;1.13e-11;15!UBERON:0002119;4.28e-11;4!UBERON:0004237;4.42e-11;10!UBERON:0004695;4.42e-11;10!UBERON:0002111;4.42e-11;10!UBERON:0004178;4.42e-11;10!UBERON:0000474;1.17e-10;37!UBERON:0000991;4.59e-10;21!UBERON:0001310;1.92e-09;4!UBERON:0000055;2.17e-09;65!UBERON:0000948;2.18e-09;22!UBERON:0003100;4.05e-09;41!UBERON:0002118;1.47e-08;5!UBERON:0003498;2.34e-08;3!UBERON:0005985;2.34e-08;3!UBERON:0001621;2.34e-08;3!UBERON:0007100;5.26e-08;25!UBERON:0002049;6.59e-08;75!UBERON:0007798;6.59e-08;75!UBERON:0000947;1.34e-07;21!UBERON:0010191;1.34e-07;21!UBERON:0003914;5.26e-07;74!UBERON:0003133;5.70e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.11e-30,42;UBERON:0003509,2.11e-30,42;UBERON:0004572,2.11e-30,42;UBERON:0004872,4.52e-27,83;UBERON:0001134,1.32e-25,62;UBERON:0002036,1.32e-25,62;UBERON:0003082,1.32e-25,62;UBERON:0002385,1.53e-24,64;UBERON:0001015,1.53e-24,64;UBERON:0000383,1.53e-24,64;UBERON:0002329,5.33e-23,71;UBERON:0003059,5.33e-23,71;UBERON:0007282,5.33e-23,71;UBERON:0004290,5.33e-23,71;UBERON:0009618,5.33e-23,71;UBERON:0004573,1.07e-22,33;UBERON:0004571,1.07e-22,33;UBERON:0003077,1.46e-22,72;UBERON:0007285,1.46e-22,72;UBERON:0007524,3.91e-22,73;UBERON:0007500,1.78e-21,59;UBERON:0001981,1.78e-21,59;UBERON:0004537,1.78e-21,59;UBERON:0006965,1.78e-21,59;UBERON:0007503,3.60e-20,78;UBERON:0000486,7.83e-20,83;UBERON:0000055,3.01e-19,68;UBERON:0004535,3.07e-18,109;UBERON:0001009,1.71e-17,112;UBERON:0003914,2.15e-17,117;UBERON:0002049,2.92e-17,78;UBERON:0007798,2.92e-17,78;UBERON:0005256,5.95e-16,122;UBERON:0000926,3.88e-15,315;UBERON:0004120,3.88e-15,315;UBERON:0006603,3.88e-15,315;UBERON:0000992,1.88e-14,13;UBERON:0000490,2.29e-14,148;UBERON:0003834,1.24e-13,5;UBERON:0001533,1.24e-13,5;UBERON:0003513,1.57e-13,7;UBERON:0003104,1.59e-13,160;UBERON:0009142,1.59e-13,160;UBERON:0003134,2.98e-13,37;UBERON:0000474,2.98e-13,37;UBERON:0003498,9.11e-13,5;UBERON:0005985,9.11e-13,5;UBERON:0000948,2.27e-12,24;UBERON:0005498,2.27e-12,24;UBERON:0004140,2.27e-12,24;UBERON:0009881,2.27e-12,24;UBERON:0004141,2.27e-12,24;UBERON:0003084,2.27e-12,24;UBERON:0007005,2.27e-12,24;UBERON:0004139,2.27e-12,24;UBERON:0004291,2.27e-12,24;UBERON:0001135,1.03e-11,15;UBERON:0003100,1.48e-11,41;UBERON:0004237,3.84e-11,10;UBERON:0004695,3.84e-11,10;UBERON:0002111,3.84e-11,10;UBERON:0004178,3.84e-11,10;UBERON:0002119,4.30e-11,4;UBERON:0007100,1.12e-10,27;UBERON:0003133,1.39e-10,48;UBERON:0005156,4.57e-10,59;UBERON:0000990,4.57e-10,59;UBERON:0000991,4.68e-10,21;UBERON:0009196,4.68e-10,21;UBERON:0009117,4.68e-10,21;UBERON:0005564,4.68e-10,21;UBERON:0001310,1.23e-09,4;UBERON:0004176,1.69e-09,22;UBERON:0002100,8.02e-09,199;UBERON:0002118,1.41e-08,5;UBERON:0001621,2.68e-08,3;UBERON:0000947,1.26e-07,21;UBERON:0010191,1.26e-07,21;UBERON:0000025,1.32e-07,192;UBERON:0003081,2.01e-07,203;UBERON:0004111,2.08e-07,240;UBERON:0002204,4.21e-07,167 | |||
|phase1_expression=0,0,0.281908808191942,1.0007329835313,0,0.872338524100369,0,0.631719873426831,0,0.491467873003018,0.697801167972428,0,0,0.37129905888014,3.31397375727916,6.05092631806598,2.41077811209591,0.730310090387373,2.43966399395253,0,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,0.12786256184353,0.722878304769133,0,0.144846518960824,0,2.43317435151318,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0.860234595106124,0.347140501607594,0,0.838998872419812,0.275118041940067,0,0,0,0,0.402829317109147,0.760272105718513,0,1.47065232138347,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0.397227542439656,2.0078563452417,0.709336764396714,1.12135520028461,0,0,0,3.90660949002095,6.21155231831143,0.151357427644931,0,0,0.936480230490962,0,1.64393548606981,0,0,0,0.204154171254893,0.122834317311768,0,1.18800285728205,2.22540236350701,0,2.15585442544872,0.168336113954066,0,0,0,0,1.80285670687916,3.97012641060074,0.179389635688862,0,0,0.900273288253207,0,0.257640540045629,0,0.337552664482532,0.0974370051611986,0.252433774244115,0,0,0,0,0.339121184620975,0.966304265816484,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.60967095213783,0.4115740113314,0,0,0,0,0,0,0.514703430895577,0,0,0.301586917234893,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0,0,0.93733833986777,0,0,0.895585227028483,0.871901815541886,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,1.55126058909333,0,0.845302752556,0.26593811658487,0,0,0,0.532844358032199,1.28680194292333,0,0,0.977208552881205,2.13235169245527,4.75171123760058,0,0,0,0,0,0,0,0,0,1.30303176000821,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0.841980283299221,0,0.511707249066704,0,2.96836132889982,0.925258162815933,1.06537035187876,0.164254312027618,1.55776328755086,1.39452454151951,0,0.200506470303285,0,0.114814448164607,1.27463817604702,0.524497659837696,0,0.308061348417659,0,0,0.316654886678627,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,1.03041011647722,0,0,0,0,1.6068392984416,0,0.616194468458578,0.614014698904518,0.551346289938122,0,0,0.596586391912706,0,0.330569830721956,0.768760269460425,0.127612712494584,0.10115778085555,0,0.31481234683064,4.1822236209636,3.38836938193698,1.59691809095107,2.60979897622522,3.89180860118232,0.715624433709956,0,0.949138274156178,3.0500831027812,0,0,0.95460974377781,13.3441268833869,0.719489830333259,3.84351841630477,4.00562167975334,1.2130948894399,6.34041284692033,28.2243165680117,0,43.6247146439999,17.9605249486484,0,2.96951407102797,4.52032466480971,2.2054613741845,13.9322184800656,11.8381739018516,0,0,1.62328301570163,1.54911749049875,6.47899885824155,0,0,1.426684205925,1.06428319221179,1.05553817648832,0.329294892959902,0,0,0.0962221127255121,0.670302275535787,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0,4.11842208584752,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.87638109372932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0.313932918407225,0,0,0,1.04135843001079,0,0,0,0,0,0,0,0,0,0,0,3.37814839895082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44119953416961,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,2.86859742932552,0,0,0,0,5.42999601753713,12.0991008768177,13.0634944043764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64180283175561,0.233713309847224,1.66441758450784,0.189403005275089,0.251567901752575,0.889811221596536,1.37304041038154,0,7.1501112268079,21.1432864485176,12.9030381402599,2.24901556081802,9.16051445569931,21.1500165998836,6.91188457850787,0,0.751288044986092,0,5.2893195316606,3.63697318405119,5.90758063733687,4.64033759878494,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0.219284049578707,0.353378291891762,0,0,0,0,0,0,0,0.132864840313363,0,0,0.983091635014877,0,0,0,0,0,3.49801305478497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,1.27762427639595,0,0,0,0,4.3464161379693,0.115233987555779,0,0,0,0,0,0,0,0,0,7.77339328387037,0.47775168788705,0.428859265059938,0,0.348724276104376,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,1.3746412112643,0.31020638566432,0,1.00669888618013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0391253762538,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.081403268610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| |||
|short_description=p@chr7:93516601..93516634,+ | |||
}} |
Revision as of 17:53, 22 January 2014
Short description: | p@chr7:93516601..93516634, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:93516601..93516634, + |
Coexpression cluster: | C378_Smooth_mesenchymal_placenta_clear_leiomyoma_renal_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.43e-35 | 32 |
smooth muscle cell | 5.06e-35 | 43 |
smooth muscle myoblast | 5.06e-35 | 43 |
muscle precursor cell | 5.90e-28 | 58 |
myoblast | 5.90e-28 | 58 |
multi-potent skeletal muscle stem cell | 5.90e-28 | 58 |
muscle cell | 8.14e-28 | 55 |
electrically responsive cell | 2.83e-24 | 61 |
electrically active cell | 2.83e-24 | 61 |
cardiocyte | 1.09e-13 | 16 |
smooth muscle cell of the subclavian artery | 1.24e-13 | 5 |
mesodermal cell | 5.67e-13 | 121 |
multi fate stem cell | 1.03e-11 | 427 |
somatic stem cell | 2.57e-11 | 433 |
aortic smooth muscle cell | 3.84e-11 | 10 |
stem cell | 8.29e-11 | 441 |
smooth muscle cell of the umbilical artery | 1.23e-09 | 4 |
smooth muscle cell of the coronary artery | 2.68e-08 | 3 |
Ontology term | p-value | n |
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