FFCP PHASE1:Hg19::chr7:93515914..93515935,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C378 | |||
|description=CAGE_peak_at_chr7:93515914..93515935,- | |||
|id=chr7:93515914..93515935,- | |||
|ontology_enrichment_celltype=CL:0000183!9.69e-25!59;CL:0000192!1.40e-24!42;CL:0000514!1.40e-24!42;CL:0000680!2.60e-24!57;CL:0000056!2.60e-24!57;CL:0000355!2.60e-24!57;CL:0000359!6.39e-24!32;CL:0000187!1.64e-22!54;CL:0000393!2.13e-19!60;CL:0000211!2.13e-19!60;CL:0000055!3.40e-14!180;CL:0000222!1.12e-12!119;CL:0002595!2.22e-11!5;CL:0002494!1.04e-08!16;CL:0002539!4.92e-07!10;CL:0000220!7.70e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002595;1.07e-29;5!CL:0000359;7.38e-27;32!CL:0000192;6.48e-17;43!CL:0002593;7.11e-13;2!CL:0000187;1.21e-11;55!CL:0002592;2.95e-09;3!CL:0000393;1.72e-08;61!CL:0000211;1.72e-08;61!CL:0000228;4.33e-07;1!CL:0002372;4.33e-07;1!CL:0002601;4.33e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,1.14e-29,5;CL:0000359,5.01e-29,32;CL:0000192,2.42e-24,43;CL:0000514,2.42e-24,43;CL:0000187,3.01e-21,55;CL:0000680,5.49e-20,58;CL:0000056,5.49e-20,58;CL:0000355,5.49e-20,58;CL:0000393,7.51e-19,61;CL:0000211,7.51e-19,61;CL:0002593,1.29e-12,2;CL:0002592,3.08e-09,3;CL:0000222,3.27e-09,121;CL:0000228,3.85e-07,1;CL:0002372,3.85e-07,1;CL:0002601,4.34e-07,1;CL:0002594,9.94e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000514;6.48e-17;43!CL:0000355;1.56e-09;58!UBERON:0003124;1.12e-07;1 | |||
|ontology_enrichment_disease=DOID:2394!4.63e-16!14;DOID:120!3.79e-10!27;DOID:193!3.23e-09!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.45e-10;14!DOID:120;1.50e-07;27!DOID:4235;4.33e-07;1!DOID:3571;4.33e-07;1!DOID:193;5.47e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.34e-10,14;DOID:120,1.43e-07,27;DOID:193,5.23e-07,29;DOID:3571,6.20e-07,1;DOID:4235,7.40e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001134!4.16e-22!61;UBERON:0002036!4.16e-22!61;UBERON:0003082!4.16e-22!61;UBERON:0004290!3.34e-21!70;UBERON:0002385!4.11e-21!63;UBERON:0001015!4.11e-21!63;UBERON:0000383!4.11e-21!63;UBERON:0001637!2.49e-20!42;UBERON:0003509!2.49e-20!42;UBERON:0004572!2.49e-20!42;UBERON:0004872!1.11e-18!84;UBERON:0004573!2.65e-18!33;UBERON:0004571!2.65e-18!33;UBERON:0000914!1.28e-17!83;UBERON:0002329!1.28e-17!83;UBERON:0003077!1.28e-17!83;UBERON:0003059!1.28e-17!83;UBERON:0007282!1.28e-17!83;UBERON:0009618!1.28e-17!83;UBERON:0007285!1.28e-17!83;UBERON:0000486!1.07e-16!82;UBERON:0001981!3.50e-16!60;UBERON:0007500!3.50e-16!60;UBERON:0004537!3.50e-16!60;UBERON:0006965!3.50e-16!60;UBERON:0003914!1.07e-14!118;UBERON:0002049!1.08e-14!79;UBERON:0007798!1.08e-14!79;UBERON:0004535!1.34e-14!110;UBERON:0000055!3.35e-14!69;UBERON:0000992!5.06e-14!13;UBERON:0001009!6.12e-14!113;UBERON:0000490!8.48e-13!138;UBERON:0005256!1.16e-12!143;UBERON:0003834!2.22e-11!5;UBERON:0001533!2.22e-11!5;UBERON:0002118!1.62e-10!5;UBERON:0004532!1.62e-10!5;UBERON:0003513!1.23e-09!8;UBERON:0000991!8.69e-08!21;UBERON:0009196!8.69e-08!21;UBERON:0009117!8.69e-08!21;UBERON:0005564!8.69e-08!21;UBERON:0003134!1.22e-07!37;UBERON:0000474!1.22e-07!37;UBERON:0004176!2.48e-07!22;UBERON:0000483!2.69e-07!309;UBERON:0003104!3.48e-07!238;UBERON:0009142!3.48e-07!238;UBERON:0000119!4.26e-07!312;UBERON:0004237!4.92e-07!10;UBERON:0004695!4.92e-07!10;UBERON:0002111!4.92e-07!10;UBERON:0004178!4.92e-07!10;UBERON:0000926!9.80e-07!448;UBERON:0004120!9.80e-07!448;UBERON:0006603!9.80e-07!448;UBERON:0000481!9.89e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;1.07e-29;5!UBERON:0001533;1.07e-29;5!UBERON:0003513;3.50e-21;7!UBERON:0004573;1.05e-20;33!UBERON:0004571;1.05e-20;33!UBERON:0001637;3.92e-19;42!UBERON:0003509;3.92e-19;42!UBERON:0004572;3.92e-19;42!UBERON:0002119;2.96e-14;4!UBERON:0002456;7.11e-13;2!UBERON:0003498;2.95e-09;3!UBERON:0005985;2.95e-09;3!UBERON:0001621;2.95e-09;3!UBERON:0000055;1.14e-08;65!UBERON:0007500;1.22e-08;56!UBERON:0001981;1.22e-08;56!UBERON:0004537;1.22e-08;56!UBERON:0000992;1.22e-07;13!UBERON:0007195;1.85e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,1.14e-29,5;UBERON:0001533,1.14e-29,5;UBERON:0001637,6.33e-25,42;UBERON:0003509,6.33e-25,42;UBERON:0004572,6.33e-25,42;UBERON:0004573,8.62e-24,33;UBERON:0004571,8.62e-24,33;UBERON:0003513,3.67e-21,7;UBERON:0001134,1.70e-18,62;UBERON:0002036,1.70e-18,62;UBERON:0003082,1.70e-18,62;UBERON:0002329,4.82e-18,71;UBERON:0003059,4.82e-18,71;UBERON:0007282,4.82e-18,71;UBERON:0004290,4.82e-18,71;UBERON:0009618,4.82e-18,71;UBERON:0002385,8.04e-18,64;UBERON:0001015,8.04e-18,64;UBERON:0000383,8.04e-18,64;UBERON:0003077,9.56e-18,72;UBERON:0007285,9.56e-18,72;UBERON:0007524,1.86e-17,73;UBERON:0007500,6.46e-17,59;UBERON:0001981,6.46e-17,59;UBERON:0004537,6.46e-17,59;UBERON:0006965,6.46e-17,59;UBERON:0007503,4.01e-16,78;UBERON:0004872,4.77e-15,83;UBERON:0000486,5.96e-15,83;UBERON:0000055,2.67e-14,68;UBERON:0002119,2.84e-14,4;UBERON:0002456,1.29e-12,2;UBERON:0002049,4.21e-12,78;UBERON:0007798,4.21e-12,78;UBERON:0005256,1.93e-10,122;UBERON:0003914,1.24e-09,117;UBERON:0001621,3.08e-09,3;UBERON:0004535,3.48e-09,109;UBERON:0000490,4.00e-09,148;UBERON:0001009,7.38e-09,112;UBERON:0000992,1.12e-07,13;UBERON:0007195,2.09e-07,1;UBERON:0003104,3.79e-07,160;UBERON:0009142,3.79e-07,160;UBERON:0003134,3.80e-07,37;UBERON:0000474,3.80e-07,37;UBERON:0001310,9.94e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0.487932798790507,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,1.04142150482278,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.286836620748814,0,0.560677600142307,0,0,0,0.269421344139376,0.490385709340376,0,0,0,0,1.1409436430889,0.597794722207204,0,0,0,0,0,0,1.18800285728205,0.494533858557114,0,0,0,0,0,0,0,0.300476117813194,0.340296549480063,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775630294546667,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,1.42636905040718,0.289562613335158,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,1.55776328755086,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0,2.16386124460217,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0.165284915360978,0,0,0.2023155617111,0,0.31481234683064,0.6970372701606,1.84820148105653,1.59691809095107,4.34966496037536,3.89180860118232,0.429374660225974,0,0.632758849437452,0.190630193923825,0.511795582622668,0,0,0.78494864019923,0,0,0.589062011728432,2.42618977887979,0,5.47635993110675,0,2.19342140668156,1.05650146756755,0,0.424216295861138,0,1.65409603063837,2.65375590096488,2.63070531152258,0,0,1.42037263873893,0,0.563391205064483,0,0,1.426684205925,1.41904425628239,0,0,0,0,0,0,0,2.82431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.52931232636591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0,0,0,0,0,0.520679215005393,0,0,0,0,0,0,0,0,0,0,0,0.596143835108969,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63293680054705,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0.228840068396924,0,0.621748802331122,1.62640664988597,2.70804504178294,0,1.24210365501008,5.80588690977198,1.32920857278997,0,0.450772826991655,0,2.84809513243263,0.727394636810238,0.966695013382396,0.928067519756987,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,1.10463570151104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0.383287282918786,0,0,0,0,5.32214220975833,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0.207216164163037,0,0,0,0.118332000730565,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0195626881269,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:93515914..93515935,- | |||
}} |
Revision as of 17:53, 22 January 2014
Short description: | p@chr7:93515914..93515935, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:93515914..93515935, - |
Coexpression cluster: | C378_Smooth_mesenchymal_placenta_clear_leiomyoma_renal_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 1.14e-29 | 5 |
vascular associated smooth muscle cell | 5.01e-29 | 32 |
smooth muscle cell | 2.42e-24 | 43 |
smooth muscle myoblast | 2.42e-24 | 43 |
muscle cell | 3.01e-21 | 55 |
muscle precursor cell | 5.49e-20 | 58 |
myoblast | 5.49e-20 | 58 |
multi-potent skeletal muscle stem cell | 5.49e-20 | 58 |
electrically responsive cell | 7.51e-19 | 61 |
electrically active cell | 7.51e-19 | 61 |
smooth muscle cell of the internal thoracic artery | 1.29e-12 | 2 |
smooth muscle cell of the coronary artery | 3.08e-09 | 3 |
mesodermal cell | 3.27e-09 | 121 |
multinucleate cell | 3.85e-07 | 1 |
myotube | 3.85e-07 | 1 |
uterine smooth muscle cell | 4.34e-07 | 1 |
smooth muscle cell of the umbilical artery | 9.94e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.34e-10 | 14 |
female reproductive organ cancer | 1.43e-07 | 27 |
reproductive organ cancer | 5.23e-07 | 29 |
liver cancer | 6.20e-07 | 1 |
spindle cell sarcoma | 7.40e-07 | 1 |