FFCP PHASE1:Hg19::chr7:77428066..77428132,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57157 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13411 | |||
|TSSclassifier=strong | |||
|UniProt=B3KQZ2,Q8N3S3,E9PEE3,Q6NW35,Q8TBW4,Q8N5I6 | |||
|association_with_transcript=0bp_to_ENST00000307305,ENST00000422959,ENST00000424760,ENST00000427986,NM_001127358,NM_001127360,uc003ugo.3,uc003ugp.2,uc003ugq.3,uc010ldv.2_5end | |||
|coexpression_cluster_id=C590 | |||
|description=CAGE_peak_2_at_PHTF2_5end | |||
|id=chr7:77428066..77428132,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.10e-49!140;CL:0000037!1.20e-48!172;CL:0000566!1.20e-48!172;CL:0002032!3.75e-45!165;CL:0000837!3.75e-45!165;CL:0000988!5.30e-45!182;CL:0002031!1.69e-41!124;CL:0002087!3.74e-39!119;CL:0000542!1.82e-27!53;CL:0000051!1.82e-27!53;CL:0000838!6.90e-27!52;CL:0000763!9.27e-19!112;CL:0000049!9.27e-19!112;CL:0000766!7.50e-18!76;CL:0002057!1.57e-16!42;CL:0000557!1.76e-15!71;CL:0000839!5.55e-15!70;CL:0000945!4.00e-14!24;CL:0000826!4.00e-14!24;CL:0000134!7.29e-14!358;CL:0000860!1.42e-13!45;CL:0000219!5.09e-13!390;CL:0002320!7.65e-13!365;CL:0000084!1.62e-12!25;CL:0000827!1.62e-12!25;CL:0002009!1.83e-12!65;CL:0002194!6.80e-12!63;CL:0000576!6.80e-12!63;CL:0000040!6.80e-12!63;CL:0000559!6.80e-12!63;CL:0000791!8.70e-11!18;CL:0000789!8.70e-11!18;CL:0002420!8.70e-11!18;CL:0002419!8.70e-11!18;CL:0000790!8.70e-11!18;CL:0000236!6.84e-10!14;CL:0000034!3.35e-07!444;CL:0000625!7.70e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.93e-16;53!CL:0000945;3.10e-14;24!CL:0002087;3.43e-13;104!CL:0000084;1.49e-12;25!CL:0000738;6.04e-11;136!CL:0000860;7.36e-11;33!CL:0002057;7.36e-11;33!CL:0000791;8.10e-11;18!CL:0000789;8.10e-11;18!CL:0002419;8.10e-11;18!CL:0000576;8.29e-10;48!CL:0000236;1.63e-09;13!CL:0000766;2.24e-09;69!CL:0000473;1.20e-08;39!CL:0000234;1.20e-08;39!CL:0000988;1.77e-08;177!CL:0000625;7.66e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.02e-53,136;CL:0000037,1.46e-51,168;CL:0000988,1.29e-48,177;CL:0002032,5.24e-48,161;CL:0000837,5.24e-48,161;CL:0002031,1.02e-44,120;CL:0002087,2.45e-42,115;CL:0000542,1.80e-27,53;CL:0000051,1.80e-27,53;CL:0000838,6.83e-27,52;CL:0000763,8.17e-21,108;CL:0000049,8.17e-21,108;CL:0000766,2.23e-20,72;CL:0000557,7.07e-18,67;CL:0000839,2.40e-17,66;CL:0000860,1.56e-16,42;CL:0002057,1.56e-16,42;CL:0000134,2.89e-15,354;CL:0000473,3.68e-15,48;CL:0000234,3.68e-15,48;CL:0002009,1.20e-14,61;CL:0000219,2.58e-14,386;CL:0002320,3.71e-14,361;CL:0000945,3.98e-14,24;CL:0000826,3.98e-14,24;CL:0002194,4.73e-14,59;CL:0000576,4.73e-14,59;CL:0000040,4.73e-14,59;CL:0000559,4.73e-14,59;CL:0000084,1.62e-12,25;CL:0000827,1.62e-12,25;CL:0000791,8.67e-11,18;CL:0000789,8.67e-11,18;CL:0002420,8.67e-11,18;CL:0002419,8.67e-11,18;CL:0000790,8.67e-11,18;CL:0000236,6.81e-10,14;CL:0000034,4.76e-08,441;CL:0000048,1.74e-07,427;CL:0000723,3.30e-07,433;CL:0000625,7.68e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;2.93e-16;53!CL:0002057;4.11e-12;42!CL:0000790;8.10e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.02e-21!102;UBERON:0003061!4.02e-21!102;UBERON:0002193!4.55e-17!112;UBERON:0002384!8.53e-14!375;UBERON:0002371!9.12e-13!80;UBERON:0001474!6.58e-12!86;UBERON:0004765!2.18e-09!101;UBERON:0001434!2.18e-09!101;UBERON:0000178!2.72e-07!15;UBERON:0000179!2.72e-07!15;UBERON:0000463!2.72e-07!15;UBERON:0002405!6.82e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.34e-07;15!UBERON:0000179;2.34e-07;15!UBERON:0000463;2.34e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.82e-23,98;UBERON:0003061,1.82e-23,98;UBERON:0002193,5.81e-19,108;UBERON:0002384,3.75e-15,371;UBERON:0002371,1.03e-14,76;UBERON:0001474,1.12e-13,82;UBERON:0002405,1.37e-13,93;UBERON:0004765,4.48e-11,90;UBERON:0001434,2.18e-10,100;UBERON:0000178,2.71e-07,15;UBERON:0000179,2.71e-07,15;UBERON:0000463,2.71e-07,15 | |||
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| |||
|short_description=p2@PHTF2 | |||
}} |
Revision as of 17:31, 22 January 2014
Short description: | p2@PHTF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PHTF2_5end |
Coexpression cluster: | C590_CD4_CD14CD16_CD14_CD19_Neutrophils_Whole_blood |
Association with transcript: | 0bp_to_ENST00000307305, ENST00000422959, ENST00000424760, ENST00000427986, NM_001127358, NM_001127360, uc003ugo.3, uc003ugp.2, uc003ugq.3, uc010ldv.2_5end |
EntrezGene: | PHTF2 |
HGNC: | 13411 |
UniProt: | B3KQZ2Q8N3S3E9PEE3Q6NW35Q8TBW4Q8N5I6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.82e-23 | 98 |
blood island | 1.82e-23 | 98 |
hemolymphoid system | 5.81e-19 | 108 |
connective tissue | 3.75e-15 | 371 |
bone marrow | 1.03e-14 | 76 |
bone element | 1.12e-13 | 82 |
immune system | 1.37e-13 | 93 |
skeletal element | 4.48e-11 | 90 |
skeletal system | 2.18e-10 | 100 |
blood | 2.71e-07 | 15 |
haemolymphatic fluid | 2.71e-07 | 15 |
organism substance | 2.71e-07 | 15 |