FFCP PHASE1:Hg19::chr7:54879609..54879616,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C418 | |||
|description=CAGE_peak_at_chr7:54879609..54879616,- | |||
|id=chr7:54879609..54879616,- | |||
|ontology_enrichment_celltype=CL:0002150!1.32e-20!3;CL:0000861!1.32e-20!3;CL:0002195!4.47e-15!2;CL:0002571!4.47e-15!2;CL:0002622!3.75e-10!3;CL:0000708!5.18e-10!3 | |||
|ontology_enrichment_celltype_v019=CL:0002563;8.81e-14;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,8.82e-14,4 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.30e-16;29 | |||
|ontology_enrichment_disease=DOID:305!1.05e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!6.72e-63!9;UBERON:0001557!4.33e-29!19;UBERON:0008947!4.23e-17!38;UBERON:0003258!4.23e-17!38;UBERON:0000072!7.93e-14!46;UBERON:0000065!8.96e-12!53;UBERON:0003210!5.18e-10!3;UBERON:0004921!2.42e-09!129;UBERON:0004185!2.42e-09!129;UBERON:0000077!2.92e-09!130;UBERON:0005705!2.89e-08!1;UBERON:0008193!2.89e-08!1;UBERON:0002514!2.89e-08!1;UBERON:0003462!2.89e-08!1;UBERON:0008001!2.89e-08!1;UBERON:0007914!2.89e-08!1;UBERON:0003457!2.89e-08!1;UBERON:0009292!2.89e-08!1;UBERON:0007375!2.89e-08!1;UBERON:0003323!2.89e-08!1;UBERON:0002397!2.89e-08!1;UBERON:0001709!2.89e-08!1;UBERON:0004066!2.89e-08!1;UBERON:0002244!2.89e-08!1;UBERON:0005620!2.89e-08!1;UBERON:0004068!2.89e-08!1;UBERON:0004362!2.89e-08!1;UBERON:0001041!3.14e-08!98;UBERON:0001004!3.23e-08!72;UBERON:0004119!1.71e-07!169;UBERON:0000925!1.71e-07!169;UBERON:0006595!1.71e-07!169;UBERON:0001007!2.64e-07!155;UBERON:0001555!2.64e-07!155;UBERON:0007026!2.64e-07!155;UBERON:0000063!6.71e-07!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.25e-50;9!UBERON:0001557;9.25e-50;9!UBERON:0000072;4.34e-14;37!UBERON:0001242;8.81e-14;4!UBERON:0001262;8.81e-14;4!UBERON:0004786;8.81e-14;4!UBERON:0004808;8.81e-14;4!UBERON:0001277;8.81e-14;4!UBERON:0000065;4.30e-09;44!UBERON:0000485;1.89e-08;7!UBERON:0003929;1.89e-08;7!UBERON:0003350;1.49e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,9.25e-50,9;UBERON:0001557,3.46e-24,19;UBERON:0001242,8.82e-14,4;UBERON:0001262,8.82e-14,4;UBERON:0004786,8.82e-14,4;UBERON:0004808,8.82e-14,4;UBERON:0001277,8.82e-14,4;UBERON:0008947,1.34e-12,38;UBERON:0003258,1.34e-12,38;UBERON:0000072,2.31e-10,47;UBERON:0000065,3.93e-09,54;UBERON:0003350,1.49e-07,8;UBERON:0004921,1.75e-07,118;UBERON:0001004,6.92e-07,74;UBERON:0000485,7.48e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828147600278907,1.34867752062481,0.723033089650446,0.55146986366197,0.217879444092406,0.949082476444386,1.07865046528132,0.98110732562673,1.53898862778556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0.714889968290738,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0.246346371159628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,8.57487336588961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:54879609..54879616,- | |||
}} |
Revision as of 17:04, 22 January 2014
Short description: | p@chr7:54879609..54879616, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:54879609..54879616, - |
Coexpression cluster: | C418_normal_Melanocyte_Hep2_cervical_umbilical_osteosarcoma_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 8.82e-14 | 4 |
Ontology term | p-value | n |
---|---|---|
larynx | 9.25e-50 | 9 |
upper respiratory tract | 3.46e-24 | 19 |
intestinal mucosa | 8.82e-14 | 4 |
wall of intestine | 8.82e-14 | 4 |
gastrointestinal system mucosa | 8.82e-14 | 4 |
gastrointestinal system epithelium | 8.82e-14 | 4 |
intestinal epithelium | 8.82e-14 | 4 |
respiratory primordium | 1.34e-12 | 38 |
endoderm of foregut | 1.34e-12 | 38 |
segment of respiratory tract | 2.31e-10 | 47 |
respiratory tract | 3.93e-09 | 54 |
epithelium of mucosa | 1.49e-07 | 8 |
subdivision of digestive tract | 1.75e-07 | 118 |
respiratory system | 6.92e-07 | 74 |
simple columnar epithelium | 7.48e-07 | 9 |