FFCP PHASE1:Hg19::chr7:41728926..41728940,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C775 | |||
|description=CAGE_peak_at_chr7:41728926..41728940,- | |||
|id=chr7:41728926..41728940,- | |||
|ontology_enrichment_celltype=CL:0000055!4.15e-19!180;CL:0000144!4.06e-15!625;CL:0002371!1.54e-13!591;CL:0000548!9.10e-13!679;CL:0000004!9.10e-13!679;CL:0000255!9.10e-13!679;CL:0000192!1.65e-12!42;CL:0000514!1.65e-12!42;CL:0000012!2.30e-12!682;CL:0000359!1.09e-11!32;CL:0000723!1.94e-11!436;CL:0000680!2.76e-11!57;CL:0000056!2.76e-11!57;CL:0000355!2.76e-11!57;CL:0002334!6.63e-11!12;CL:0000048!7.64e-11!430;CL:0000034!2.26e-10!444;CL:0000187!2.63e-10!54;CL:0000057!1.04e-09!75;CL:0000393!3.43e-09!60;CL:0000211!3.43e-09!60;CL:0000183!1.99e-08!59;CL:0000003!4.59e-08!722 | |||
|ontology_enrichment_celltype_v019=CL:0002334;5.09e-17;12!CL:0000134;4.54e-09;55!CL:0000359;6.22e-08;32!CL:0000048;3.67e-07;58!CL:0002579;8.79e-07;3!CL:0002615;9.30e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,3.00e-17,12;CL:0000723,3.37e-10,433;CL:0000034,1.30e-09,441;CL:0000048,4.02e-09,427;CL:0000359,4.88e-08,32;CL:0000057,7.36e-07,76;CL:0002579,7.39e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.97e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.84e-14;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.62e-14,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.18e-11!83;UBERON:0002329!3.18e-11!83;UBERON:0003077!3.18e-11!83;UBERON:0003059!3.18e-11!83;UBERON:0007282!3.18e-11!83;UBERON:0009618!3.18e-11!83;UBERON:0007285!3.18e-11!83;UBERON:0000486!3.95e-10!82;UBERON:0001134!1.09e-09!61;UBERON:0002036!1.09e-09!61;UBERON:0003082!1.09e-09!61;UBERON:0002385!1.60e-09!63;UBERON:0001015!1.60e-09!63;UBERON:0000383!1.60e-09!63;UBERON:0004290!6.64e-09!70;UBERON:0004573!1.06e-08!33;UBERON:0004571!1.06e-08!33;UBERON:0001637!1.20e-08!42;UBERON:0003509!1.20e-08!42;UBERON:0004572!1.20e-08!42;UBERON:0004872!8.97e-08!84;UBERON:0002204!2.70e-07!167;UBERON:0002049!3.07e-07!79;UBERON:0007798!3.07e-07!79;UBERON:0001981!3.93e-07!60;UBERON:0007500!3.93e-07!60;UBERON:0004537!3.93e-07!60;UBERON:0006965!3.93e-07!60;UBERON:0003688!6.50e-07!6;UBERON:0002358!6.50e-07!6;UBERON:0003684!6.50e-07!6;UBERON:0001178!6.50e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;6.72e-12;6!UBERON:0002358;6.72e-12;6!UBERON:0003684;6.72e-12;6!UBERON:0001178;6.72e-12;6!UBERON:0004457;8.45e-10;9!UBERON:0000042;8.45e-10;9!UBERON:0002118;1.29e-09;5!UBERON:0004573;1.17e-08;33!UBERON:0004571;1.17e-08;33!UBERON:0001708;6.65e-07;4!UBERON:0008895;6.65e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,6.28e-12,6;UBERON:0002358,6.28e-12,6;UBERON:0003684,6.28e-12,6;UBERON:0001178,6.28e-12,6;UBERON:0002118,1.21e-09,5;UBERON:0004573,6.32e-09,33;UBERON:0004571,6.32e-09,33;UBERON:0001637,5.85e-08,42;UBERON:0003509,5.85e-08,42;UBERON:0004572,5.85e-08,42;UBERON:0001708,4.25e-07,4;UBERON:0008895,4.25e-07,4;UBERON:0004457,6.62e-07,12;UBERON:0000042,6.62e-07,12 | |||
|phase1_expression=1.81678379270557,2.99740733447376,3.10099689011137,6.00439790118782,4.46961094427288,4.36169262050184,0,0,0,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0.331397375727916,5.3786011716142,5.42425075221579,2.19093027116212,1.95173119516203,0,0,0,0,0.136874425072884,0.251085279189606,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.822335776043652,0.309706370895104,1.1507695692886,0.768482119587302,0.47296445977717,1.37898272294647,2.5819387343353,1.35426486594342,0.188242339542605,0,0.224723484445085,3.06083892370903,0,0.639337125799041,0,0,0,0.580418477257168,1.13477044938228,0.622822248995575,0,0.521482918420201,0,0.605399502633369,1.10483290796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97583067623023,1.50401373190767,2.02785126545153,0.795285947051099,1.94653948121054,0.0945348171640679,1.99556457716308,0.966182642624386,0,0,0,0,0.174129737299267,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0.402829317109147,0,0,0,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,0,4.47274756525787,1.01304409331664,1.58891016975863,1.43418310374407,0.709336764396714,0,2.1349799145941,3.94668077467456,0.311211035399766,0,0.163461903113459,0,0.576175924479999,0,0,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0,0.122834317311768,0.103325781175765,1.18800285728205,2.47266929278557,0,0,0,0,0,0.877955241761676,2.45190236639216,2.25357088359895,0.113432183160021,1.61450672119976,0.640672166455702,0.211931901159562,0.300091096084402,0.103052529238439,1.54584324027377,0.37223371266318,1.68776332241266,0.68205903612839,0.757301322732344,0.0920498986422993,0,0.355009592516614,0.302256294682921,0.339121184620975,2.89891279744945,3.27295344709002,0.860413786167011,0,0,0,0,0,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,2.30475599358114,0,1.20634766893957,2.12953423864618,0,0,1.44331342025273,0.115930404975077,0.821860859650752,0,0,0.380508304469197,0,0,0,0.234004265139238,0,1.87467667973554,2.35174979478403,1.27597587518148,1.61205340865127,0.581267877027924,0,0.492663237895943,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0.1466765716419,3.10252117818667,0,0,2.92531928243358,1.04007436911366,0.257207374262142,0,0,0.428933980974443,0,0,0.325736184293735,0.355391948742546,0,0,0.871533458600294,0.499864955910285,0,0,0,3.11512312139057,2.29723871668228,0,0.434343920002738,0.821905290201534,0.537182889719687,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0.271265023699736,1.24782516918484,3.7470087647404,0.946214490203608,0.35142424497814,0,0,1.03473071292505,1.99267679560631,0.553107505625109,0,0,0,0,0,0,0,0,0.30239029332968,3.2254015016441,4.29693525206575,4.2099014164961,2.94720043288112,7.67560873600055,19.6241783795201,1.48418066444991,4.93471020168498,1.77561725313127,0.657017248110473,3.63478100428535,2.20799719073923,0,3.80962293576241,0.460404944679482,0.34444334449382,0.182091168006717,0,0,0.308061348417659,0,0,0.211103257785751,0,0,1.51141141271498,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0.366277859273374,0.247528499761764,0,0.650060246036521,1.6068392984416,0.290012154876366,0.308097234229289,0,0.689182862422653,0,0,0.511359764496605,0.0890320356467374,0.165284915360978,0.384380134730212,1.78657797492418,0,0,8.81474571125792,0.6970372701606,0.308033580176089,0,0.869932992075073,1.11194531462352,1.14499909393593,0.372158369359667,0.316379424718726,0.38126038784765,0,0,0.318203247925937,1.56989728039846,1.07923474549989,0.274537029736055,1.17812402345686,0.808729926293264,0,0.842516912477962,0.48763373908959,3.1682753652067,1.05650146756755,0.818999468447914,0.848432591722276,0,0,1.32687795048244,6.13831239355268,0,0,1.01455188481352,0.92947049429925,1.12678241012897,1.29070216983646,0.785992328104969,0.7133421029625,0.354761064070598,1.05553817648832,0,0,0,0.288666338176536,0,0,0.847294206991012,0,0,0.443430153536676,2.29723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.890469640183247,0,0,1.19548792950642,0,0,0.20453736500431,0,5.59871257791253,0.898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50672522863403,0,0,0,0.957003479195758,1.19076871422421,7.99552164027952,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0.34823682632161,0,1.0319161948297,0,0,0,0.193978032976839,0,0.225980740780532,0.411125773940253,0.596143835108969,0,0,0.561111741760736,0,1.39866726707491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0.229160424011684,0,0,0,0,0,7.92659743793288,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0.537862017998534,0.767660789277781,0.714695326373367,0,0,0,0,0,0,0,1.36310417428337,0,0,0,0,0,0,0,0,0,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705797459094515,0,0,1.79105763464249,0.934853239388898,0.554805861502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| |||
|short_description=p@chr7:41728926..41728940,- | |||
}} |
Revision as of 16:42, 22 January 2014
Short description: | p@chr7:41728926..41728940, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:41728926..41728940, - |
Coexpression cluster: | C775_hepatic_Preadipocyte_Mallassezderived_mesenchymal_Smooth_spindle_pagetoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 3.00e-17 | 12 |
somatic stem cell | 3.37e-10 | 433 |
stem cell | 1.30e-09 | 441 |
multi fate stem cell | 4.02e-09 | 427 |
vascular associated smooth muscle cell | 4.88e-08 | 32 |
fibroblast | 7.36e-07 | 76 |
omentum preadipocyte | 7.39e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 6.28e-12 | 6 |
peritoneum | 6.28e-12 | 6 |
abdominal cavity | 6.28e-12 | 6 |
visceral peritoneum | 6.28e-12 | 6 |
right ovary | 1.21e-09 | 5 |
systemic artery | 6.32e-09 | 33 |
systemic arterial system | 6.32e-09 | 33 |
artery | 5.85e-08 | 42 |
arterial blood vessel | 5.85e-08 | 42 |
arterial system | 5.85e-08 | 42 |
jaw skeleton | 4.25e-07 | 4 |
splanchnocranium | 4.25e-07 | 4 |
cavity lining | 6.62e-07 | 12 |
serous membrane | 6.62e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.62e-14 | 14 |