FFCP PHASE1:Hg19::chr7:29186192..29186222,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1124 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1944 | |||
|TSSclassifier=strong | |||
|UniProt=F5H003 | |||
|association_with_transcript=0bp_to_ENST00000461824,ENST00000474070,ENST00000539406,uc011jzs.1_5end | |||
|description=CAGE_peak_2_at_CHN2_5end | |||
|id=chr7:29186192..29186222,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.31e-34!65;CL:0002194!2.49e-33!63;CL:0000576!2.49e-33!63;CL:0000040!2.49e-33!63;CL:0000559!2.49e-33!63;CL:0000557!3.35e-30!71;CL:0000839!3.32e-29!70;CL:0000766!2.12e-26!76;CL:0000860!1.10e-24!45;CL:0002057!4.27e-24!42;CL:0000763!1.10e-20!112;CL:0000049!1.10e-20!112;CL:0002087!1.65e-17!119;CL:0000738!1.86e-16!140;CL:0002031!3.01e-15!124;CL:0000037!2.06e-14!172;CL:0000566!2.06e-14!172;CL:0002032!1.81e-12!165;CL:0000837!1.81e-12!165;CL:0000988!1.23e-11!182;CL:0002393!5.43e-08!9;CL:0002397!5.43e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000576;3.82e-22;48!CL:0000473;7.00e-21;39!CL:0000234;7.00e-21;39!CL:0000860;4.69e-19;33!CL:0002057;4.69e-19;33!CL:0000766;6.76e-16;69!CL:0000763;3.70e-09;100!CL:0002393;1.21e-07;6!CL:0002397;1.21e-07;6!CL:0000235;2.45e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,2.18e-44,61;CL:0002194,1.10e-42,59;CL:0000576,1.10e-42,59;CL:0000040,1.10e-42,59;CL:0000559,1.10e-42,59;CL:0000557,9.06e-40,67;CL:0000839,2.02e-38,66;CL:0000766,8.89e-36,72;CL:0000473,2.46e-35,48;CL:0000234,2.46e-35,48;CL:0000860,1.62e-29,42;CL:0002057,1.62e-29,42;CL:0000763,7.15e-29,108;CL:0000049,7.15e-29,108;CL:0002087,9.70e-21,115;CL:0000738,3.70e-20,136;CL:0000037,1.04e-18,168;CL:0002031,1.39e-18,120;CL:0002032,1.73e-16,161;CL:0000837,1.73e-16,161;CL:0000988,2.40e-16,177;CL:0002393,4.04e-10,9;CL:0002397,4.04e-10,9;CL:0000235,2.70e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;8.36e-21;42!CL:0000049;4.17e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.88e-28!102;UBERON:0003061!7.88e-28!102;UBERON:0002193!2.27e-24!112;UBERON:0007023!3.53e-24!115;UBERON:0001474!5.60e-24!86;UBERON:0002371!6.32e-24!80;UBERON:0002405!2.94e-18!115;UBERON:0004765!1.09e-17!101;UBERON:0001434!1.09e-17!101;UBERON:0001049!4.14e-07!57;UBERON:0005068!4.14e-07!57;UBERON:0006241!4.14e-07!57;UBERON:0007135!4.14e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.53e-38,98;UBERON:0003061,5.53e-38,98;UBERON:0002193,1.22e-32,108;UBERON:0002371,3.17e-32,76;UBERON:0001474,7.03e-32,82;UBERON:0002405,4.07e-27,93;UBERON:0004765,6.63e-27,90;UBERON:0001434,6.35e-23,100;UBERON:0007023,5.50e-16,114;UBERON:0003081,2.26e-10,203;UBERON:0002204,6.23e-07,167 | |||
|phase1_expression=0,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.273748850145768,0.125542639594803,0,0,0,4.32700704533794,9.21190555433311,8.20525453575203,0,0,0,0,0,0.587200878669695,13.2958898047651,14.4392002178502,11.0675544065084,26.1981104860711,17.8141516310439,15.4545340580512,5.52513307362346,3.02300754951048,4.85168122375632,0.697287110717054,2.05583944010913,2.47765096716083,4.02769349251011,6.66017836975662,5.67557351732605,2.75796544589295,7.74581620300591,9.47985406160392,2.25890807451126,4.63940455098338,3.82029923556644,2.44867113896722,4.17207735198922,3.83602275479425,2.96866170168044,5.58498241340569,3.83602275479425,3.77272010217159,2.26954089876456,1.24564449799115,3.51748131359441,7.30076085788282,6.73285418585862,0.605399502633369,4.78760926783834,2.84816148696796,15.2103806144598,7.01594189884644,22.6431337149046,19.9944963440761,7.35866774923381,31.8236661660219,8.83539505597871,3.18266683518544,12.7864907635244,0,0,0,0.426730222566507,0.400395987036012,0,0.661044872784862,0.954053754535364,0,0,0,1.32171328579026,1.12101712596307,1.31692042387539,0.393419540227666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.903450714466637,0.76791966692651,2.49861453104692,2.13099526839615,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0.175669571386252,2.03017567021455,0,0,9.41187441598582,7.48757870386849,11.7003005256601,1.66943437013739,1.71598473234038,1.11437250398869,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0.74000264525148,0.933633106199299,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,1.34171076742555,0.795178609928912,0.813357600086629,2.59152637538426,0.756962552626885,1.45990943630332,0,0,0,0,0,0.591534000199219,1.51726221070292,0.241011029883482,0.882351781859152,0.653638332277218,0.71181185733329,0.404493924480493,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,2.20731549707325,5.90344505006945,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,19.6973604869918,7.25413221931637,6.24250881612659,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0.336393253036082,0,0.36669142910475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20575750823834,1.74306691720059,0.399891964728228,9.72990245129524,12.054170194371,10.5416969741516,0,0,0,0.579125226670317,0,0.179060963239896,0.112085143993527,0.394061520403854,0,0.641715181398742,2.54094624222463,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7857774890046,7.98142543028882,2.45473382947922,0.303127571446259,0,0,0,0,0,0.128139149255701,0,0,1.48418066444991,0,0,0,0,0,7.25156697549733,0,0,0,0,0.131124414959424,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,1.31555925987561,2.87578996127391,0,0,0,1.854738209659,1.64825036673018,2.47528499761764,0,0,0,0,0,0.15350367472613,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,3.10674542563371,0,0,0,0,3.04468565539302,3.0585488285695,3.41788312304498,3.09701308095126,3.29089818468955,1.94541993357815,1.62009431171434,3.17250070517708,0,0.962479855263359,0,2.9728508020115,0,8.18131198506762,5.26106700005114,0,0,0,0,10.9510899464249,0,0,0,0,0,0,1.70338495076131,0,2.45792611446766,3.35514161838624,1.83534055883099,8.01091191148365,0,1.23087398947712,3.78637949866376,0,1.4098700508785,0,1.17206543417515,0,0,0,0,0.296964680832639,0,0,1.96937182974718,0,0,0,1.19548792950642,0.828851746593443,2.51932747854276,0,3.44637455290994,0,0,0,0,1.97286811273867,2.3948309234694,0,0,0.556608588971108,0,0,0,0,0.1137934482855,0,0.709163045303809,3.10269035917318,0.874813840149763,3.47249989866585,7.97167247232455,7.95936494927692,3.05163472634166,0.552896299656123,0.591095237907095,0.658156191461918,0,1.39423744278603,2.6932590476329,0.91153644677601,4.6112780877612,2.78248697670294,2.60753692612819,0.957003479195758,0.0915975934018623,0,0,0,5.48498550270516,0.225595660617181,0,0,0,7.4700192120778,0.843992258112108,6.52931232636591,3.53382678584852,1.08194319871046,0.995261931078505,1.50377859655677,1.22206028986725,0,0,0,3.43745778201453,0.802577647298789,0.937057782901357,1.45963831372533,4.69595085437015,0,1.57833761139756,2.41981432097328,0,2.40109002588254,2.25485129121739,2.90326935912292,0,0,0,0,4.26914319044689,0,0.520679215005393,0,1.91530254476886,2.97035336011451,0,1.64485763191445,1.38869702463753,1.47807822695777,0.484945082442097,0,0.225980740780532,0,1.78843150532691,0.949661939338181,1.95551382734803,0,1.49417096317547,0.19980960958213,0,0,5.14784993585894,0,13.4192738410667,0,0.543616824294456,0.418411385249333,0,4.04530825862126,4.20294202096853,1.09524303113594,2.55493176133945,0,0,1.39641200636127,10.5413795045374,0,6.58940701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| |||
|short_description=p2@CHN2 | |||
}} |
Revision as of 16:17, 22 January 2014
Short description: | p2@CHN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CHN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000461824, ENST00000474070, ENST00000539406, uc011jzs.1_5end |
EntrezGene: | CHN2 |
HGNC: | 1944 |
UniProt: | F5H003 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 2.18e-44 | 61 |
monopoietic cell | 1.10e-42 | 59 |
monocyte | 1.10e-42 | 59 |
monoblast | 1.10e-42 | 59 |
promonocyte | 1.10e-42 | 59 |
granulocyte monocyte progenitor cell | 9.06e-40 | 67 |
myeloid lineage restricted progenitor cell | 2.02e-38 | 66 |
myeloid leukocyte | 8.89e-36 | 72 |
defensive cell | 2.46e-35 | 48 |
phagocyte | 2.46e-35 | 48 |
classical monocyte | 1.62e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.62e-29 | 42 |
myeloid cell | 7.15e-29 | 108 |
common myeloid progenitor | 7.15e-29 | 108 |
nongranular leukocyte | 9.70e-21 | 115 |
leukocyte | 3.70e-20 | 136 |
hematopoietic stem cell | 1.04e-18 | 168 |
hematopoietic lineage restricted progenitor cell | 1.39e-18 | 120 |
hematopoietic oligopotent progenitor cell | 1.73e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.73e-16 | 161 |
hematopoietic cell | 2.40e-16 | 177 |
intermediate monocyte | 4.04e-10 | 9 |
CD14-positive, CD16-positive monocyte | 4.04e-10 | 9 |
macrophage | 2.70e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.53e-38 | 98 |
blood island | 5.53e-38 | 98 |
hemolymphoid system | 1.22e-32 | 108 |
bone marrow | 3.17e-32 | 76 |
bone element | 7.03e-32 | 82 |
immune system | 4.07e-27 | 93 |
skeletal element | 6.63e-27 | 90 |
skeletal system | 6.35e-23 | 100 |
adult organism | 5.50e-16 | 114 |
lateral plate mesoderm | 2.26e-10 | 203 |
musculoskeletal system | 6.23e-07 | 167 |