FFCP PHASE1:Hg19::chr6:149794267..149794270,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C673 | |||
|description=CAGE_peak_at_chr6:149794267..149794270,- | |||
|id=chr6:149794267..149794270,- | |||
|ontology_enrichment_celltype=CL:0000838!1.02e-39!52;CL:0000542!8.52e-39!53;CL:0000051!8.52e-39!53;CL:0000738!1.40e-29!140;CL:0002031!1.44e-28!124;CL:0002087!2.91e-28!119;CL:0002032!9.70e-26!165;CL:0000837!9.70e-26!165;CL:0000988!1.16e-25!182;CL:0000037!2.30e-25!172;CL:0000566!2.30e-25!172;CL:0000791!7.40e-25!18;CL:0000789!7.40e-25!18;CL:0002420!7.40e-25!18;CL:0002419!7.40e-25!18;CL:0000790!7.40e-25!18;CL:0000084!2.57e-19!25;CL:0000827!2.57e-19!25;CL:0000624!5.58e-16!6;CL:0000945!1.33e-15!24;CL:0000826!1.33e-15!24;CL:0000236!1.10e-14!14;CL:0000625!3.19e-13!11;CL:0000623!7.56e-09!3;CL:0000825!7.56e-09!3;CL:0000453!1.03e-08!5;CL:0000898!1.82e-08!3;CL:0000990!4.52e-07!8;CL:0001014!9.73e-07!2;CL:0001016!9.73e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.04e-31;13!CL:0000945;2.92e-17;24!CL:0000624;3.85e-12;6!CL:0000542;1.79e-11;53!CL:0001014;1.33e-09;2!CL:0001016;1.33e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.64e-29,14;CL:0000945,2.73e-17,24;CL:0000826,2.73e-17,24;CL:0000838,2.75e-15,52;CL:0000542,5.42e-15,53;CL:0000051,5.42e-15,53;CL:0000624,3.26e-12,6;CL:0002031,2.21e-10,120;CL:0001014,1.57e-09,2;CL:0001016,1.57e-09,2;CL:0000738,4.43e-09,136;CL:0002087,1.42e-08,115;CL:0002032,1.49e-07,161;CL:0000837,1.49e-07,161;CL:0000037,3.31e-07,168;CL:0000988,8.46e-07,177 | |||
|ontology_enrichment_development_v019=UBERON:0005425;7.36e-18;1!CL:0000051;1.79e-11;53!UBERON:0003056;8.14e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;7.36e-18;1!UBERON:0001785;7.36e-18;1!UBERON:0002464;7.36e-18;1!UBERON:0004904;7.36e-18;1!UBERON:0001021;7.36e-18;1!UBERON:0003714;1.33e-09;2!UBERON:0005162;1.33e-09;2!UBERON:0000122;1.33e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.75e-18,1;UBERON:0001785,3.75e-18,1;UBERON:0002464,3.75e-18,1;UBERON:0004904,3.75e-18,1;UBERON:0001021,3.75e-18,1;UBERON:0003902,3.75e-18,1;UBERON:0005425,3.75e-18,1;UBERON:0003714,9.46e-10,2;UBERON:0005162,9.46e-10,2;UBERON:0000122,9.46e-10,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0.284338464974843,0,0,0.401088894940283,0.434021741431704,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502497330513487,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0.889509253863555,0.426730222566507,0.400395987036012,1.14950487990897,0,1.90810750907073,1.1384259382189,0.587237189370939,1.14681968437569,0,0.560508562981536,0,1.37696839079683,7.8602152549833,0.411202997999018,0.501559486172034,0.32592226663359,0,0,0.445641827540694,0.294605907474837,0.664601683750863,0,0.384273959177026,1.04047478047903,0.164437904603676,0.276350017785848,0.289803085735052,0,0,0,0.113309342697566,0.766440987203842,0.34362744548263,0,0.637130828648193,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0.403213486449465,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0,0.179060963239896,0,0.591092280605782,0.646882724578552,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0.714695326373367,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,1.1248694577575,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202056159043763,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:149794267..149794270,- | |||
}} |
Revision as of 14:32, 22 January 2014
Short description: | p@chr6:149794267..149794270, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:149794267..149794270, - |
Coexpression cluster: | C673_CD4_Neutrophils_blood_CD8_skeletal_parietal_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.64e-29 | 14 |
lymphocyte of B lineage | 2.73e-17 | 24 |
pro-B cell | 2.73e-17 | 24 |
lymphoid lineage restricted progenitor cell | 2.75e-15 | 52 |
lymphocyte | 5.42e-15 | 53 |
common lymphoid progenitor | 5.42e-15 | 53 |
CD4-positive, alpha-beta T cell | 3.26e-12 | 6 |
hematopoietic lineage restricted progenitor cell | 2.21e-10 | 120 |
CD1a-positive Langerhans cell | 1.57e-09 | 2 |
immature CD1a-positive Langerhans cell | 1.57e-09 | 2 |
leukocyte | 4.43e-09 | 136 |
nongranular leukocyte | 1.42e-08 | 115 |
hematopoietic oligopotent progenitor cell | 1.49e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.49e-07 | 161 |
hematopoietic stem cell | 3.31e-07 | 168 |
hematopoietic cell | 8.46e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.75e-18 | 1 |
cranial nerve | 3.75e-18 | 1 |
nerve trunk | 3.75e-18 | 1 |
nerve connecting eye with brain | 3.75e-18 | 1 |
nerve | 3.75e-18 | 1 |
retinal neural layer | 3.75e-18 | 1 |
presumptive neural retina | 3.75e-18 | 1 |
neural tissue | 9.46e-10 | 2 |
multi cell component structure | 9.46e-10 | 2 |
neuron projection bundle | 9.46e-10 | 2 |