FFCP PHASE1:Hg19::chr6:149638876..149638921,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23118 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17075 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-141bp_to_ENST00000392282,uc003qmj.2_5end | |||
|description=CAGE_peak_3_at_TAB2_5end | |||
|id=chr6:149638876..149638921,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.03e-22!115;UBERON:0000955!9.19e-11!69;UBERON:0006238!9.19e-11!69;UBERON:0001049!9.59e-11!57;UBERON:0005068!9.59e-11!57;UBERON:0006241!9.59e-11!57;UBERON:0007135!9.59e-11!57;UBERON:0001017!1.35e-10!82;UBERON:0002616!1.25e-09!59;UBERON:0005743!1.67e-09!86;UBERON:0000073!1.21e-08!94;UBERON:0001016!1.21e-08!94;UBERON:0003080!1.35e-08!42;UBERON:0002780!2.39e-08!41;UBERON:0001890!2.39e-08!41;UBERON:0006240!2.39e-08!41;UBERON:0002020!3.83e-08!34;UBERON:0003528!3.83e-08!34;UBERON:0001893!6.56e-08!34;UBERON:0002791!1.28e-07!33;UBERON:0001869!3.86e-07!32;UBERON:0003075!4.31e-07!86;UBERON:0007284!4.31e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;3.51e-07;34!UBERON:0002020;3.51e-07;34!UBERON:0001893;5.78e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.07e-21,114;UBERON:0001049,1.82e-10,56;UBERON:0005068,1.82e-10,56;UBERON:0006241,1.82e-10,56;UBERON:0007135,1.82e-10,56;UBERON:0000955,2.33e-10,68;UBERON:0006238,2.33e-10,68;UBERON:0001017,5.03e-10,81;UBERON:0000073,1.68e-09,53;UBERON:0002616,1.68e-09,53;UBERON:0001016,4.85e-09,89;UBERON:0002780,2.16e-08,41;UBERON:0001890,2.16e-08,41;UBERON:0003080,2.16e-08,41;UBERON:0006240,2.16e-08,41;UBERON:0003528,3.56e-08,34;UBERON:0002020,3.56e-08,34;UBERON:0001893,6.15e-08,34;UBERON:0002791,3.08e-07,32;UBERON:0001869,3.72e-07,32;UBERON:0003075,8.36e-07,82;UBERON:0007284,8.36e-07,82;UBERON:0011216,8.38e-07,223 | |||
|phase1_expression=2.18014055124668,2.99740733447376,2.25527046553554,2.00146596706261,4.46961094427288,2.61701557230111,0,1.89515962028049,0.783556884599516,0.491467873003018,0,1.31064823278103,0,1.98026164736075,1.32558950291166,3.36162573225888,0.602694528023977,1.46062018077475,1.46379839637152,3.57051068422685,0.816002764977012,1.25381888591235,3.72106783270374,4.24310717725941,1.88313959392204,1.91033514369878,1.14940825229924,1.8890587515283,2.36018566109342,1.53531759238885,3.09632246632152,0.919421224478927,0.30120591877825,0.369754010166788,1.16200800870452,0.853015394924529,0.293600439334847,8.86392653651004,3.60980005446255,6.2933152507597,4.70222495903841,5.50619232232265,3.8636335145128,1.16318591023652,2.64513160582167,1.69808842831471,2.09186133215116,2.87817521615278,1.85823822537062,1.7261543539329,1.2808035326455,0.945928919554341,4.13694816883942,1.93645405075148,5.41705946377367,2.25890807451126,0.545812300115692,3.14612878223118,3.06083892370903,1.92557416245656,0.639337125799041,1.9791078011203,0.398927315243264,1.27867425159808,6.96502172708602,2.8369261234557,6.85104473895132,1.7587406567972,1.0429658368404,1.3031330682307,4.84319602106695,2.94622108790052,2.84816148696796,0,0.425208599930087,1.04829322754188,0.898629049171961,1.20141514273205,1.92870704036496,0.570025487482497,0.19891667719909,0.182664153764634,0,0.546138611262131,0.889509253863555,0.426730222566507,0.800791974072025,1.14950487990897,0.661044872784862,0,1.70763890732835,2.34894875748376,2.6759125968766,3.96513985737078,4.48406850385229,1.05353633910031,4.32761494250433,7.8602152549833,3.49522548299166,11.8702411727381,3.91106719960308,3.78758244587787,1.94826728407911,8.35578426638802,2.94605907474837,2.21533894583621,2.43723477388514,11.6563100950364,12.4856973657483,8.55077103939116,6.63240042686036,6.66547097190621,1.4828656316206,0.535081656179426,1.04535523804977,6.57194187645884,2.68254345521345,0.34362744548263,3.03623630423403,1.27426165729639,2.60433381542567,3.8018081777935,2.71035214339991,3.07167866770604,1.24930726552346,2.8413270245282,4.92676798152628,4.83856183739358,4.01160293675261,2.89648807765598,24.3806866313962,3.35350429851818,2.04580098949649,0.722878304769133,1.50401373190767,1.88300474649071,0.795285947051099,1.94653948121054,3.59232305223458,1.55210578223795,2.45937399940753,2.48860243445654,0.728590576585084,0.370784442784429,3.57002133020152,4.70150290708022,3.0580330919339,5.24679373471752,1.71598473234038,5.20040501861391,1.19257444420023,0,0.694281003215189,0.56530794192401,0.419499436209906,0,1.04497483268405,0.258416759169329,1.06729878806013,0.33472061276467,0.805658634218294,0,0.488124115096339,0.367663080345869,0.81014194788176,0.803697554556718,1.12264686313085,0.900891843866578,0,0,1.09921046358244,13.1780417436063,3.87780264148325,0,0.496971951695318,2.27934920996244,0.794455084879313,2.0078563452417,1.41867352879343,0,2.1349799145941,1.2333377420858,4.66816553099649,2.69421344139376,1.47115712802113,2.27036141467397,3.45705554687999,0.70296429550139,1.24864030732128,1.1409436430889,1.04614076386261,1.05691048779388,1.45685649931318,0.702254033511242,1.42907919878425,0.982674538494144,1.65321249881225,5.94001428641027,3.4617370098998,0.910161361938026,2.87447256726495,1.0100166837244,1.37630371859161,3.04770527032601,4.38977620880838,1.5324389789951,3.30523729594513,1.02088964844019,0.538168907066586,1.92201649936711,1.69545520927649,0.600182192168805,1.8549455262919,1.28820270022815,1.67505170698431,0.675105328965065,2.33848812386877,1.00973509697646,2.11714766877288,2.90962902273861,1.77504796258307,2.72030665214629,0.847802961552438,0.966304265816484,1.36373060295417,0.286804595389004,1.82960559194393,2.25300606146525,2.20768491452085,3.73179798055334,2.52320850875628,2.91981887260664,0,1.92972281457866,1.38134921352481,5.10804720835177,1.44375896333917,0.709840800239063,0.842923450390509,0.482022059766964,0.661763836394364,0.217879444092406,0.474541238222193,1.07865046528132,0.196221465125346,0.38474715694639,2.21446636387394,0,0,1.47008711385542,3.80265104465493,1.96565443335525,1.18157981336281,0.441463099414651,0.737930631258681,1.54411029268673,1.64625428112938,0,1.10581869652794,1.11106134190236,0.651616610620649,0,0,1.85488647960123,4.3441216867254,0.144366447761074,0,0.380508304469197,1.58040879591855,4.29243081047436,5.66299114001014,2.10603838625314,4.01304138179566,0.93733833986777,1.00789276919316,1.41775097242386,3.22410681730254,2.61570544662566,0.766765358330422,5.41929561685538,1.67292024625129,7.67114027500857,9.65603687893642,8.07951573928832,1.14296209725904,1.90994212779139,0,1.71072446022705,0.514137463516618,0.300343057843917,2.28661146104463,0.897048674762886,2.61576041299968,1.98013371716565,1.42198887333556,0,0.845302752556,2.12750493267896,3.12022310734098,0.771622122786426,0,1.8649552531127,5.29018576535146,0,1.64648067356154,0.325736184293735,3.55391948742546,0.791951872933429,3.91871190177462,2.61460037580088,5.19859554146697,0,3.51579964002488,4.21667878966063,1.4377491329495,0,9.98458335285029,2.31650090668127,0.821905290201534,2.68591444859843,0.784596007954691,1.77327684181734,3.23441362289276,3.08023287071396,2.54094624222463,1.30139853857622,3.09315525111078,0.837581326671744,2.55175500661265,5.24304916763028,2.99161459204025,10.3603878359009,2.94459580125936,1.00034104211935,2.44138521329762,0.831883446123229,2.14114786556594,1.73472656537328,2.22568688486155,2.70851489754947,0,0,2.65690239414175,1.84369168541703,2.60650843404249,1.76221041716467,2.05886054286514,3.72182447021197,4.09856981555372,2.98837161849644,1.21251028578504,0,0.907170879989041,0.248107807818777,0.767309866440312,1.68396056659844,1.02511319404561,2.55853624533352,2.2519548960105,0,2.92998418225046,1.9531789784444,1.56041596426237,0,1.74315567689939,1.45031339509947,1.40354529212299,2.02578175658972,3.67406234126742,1.45672934405374,4.327105693661,0.451199612907412,0.924184045252977,0.784349769176855,1.46139224653261,0.316654886678627,0,1.02056223165909,1.94324324491925,0,0.270946437543853,0,0.509752546090077,0,0.223874754722178,1.31555925987561,1.3071772551245,0.769350375349168,0.328014645699706,0.650756789328606,8.44936295511323,2.19766715564024,1.98022799809411,1.72279661398852,0.650060246036521,1.6068392984416,1.45006077438183,2.61882649094895,1.84204409671355,1.24052915236078,2.79292636657511,1.74020032697074,1.96021243057032,1.95870478422822,1.65284915360978,1.53752053892085,1.91419068741876,3.13589120652205,0.929691098594572,0.62962469366128,3.485186350803,1.23213432070436,0,1.73986598415015,1.11194531462352,1.14499909393593,2.232950216158,0.949138274156178,2.47819252100972,0.767693373934002,2.1396949401696,1.27281299170375,3.13979456079692,5.21630126991613,2.19629623788844,3.06312246098785,1.81964233415984,3.17020642346017,0.421258456238981,0.975267478179181,2.43713489631284,1.05650146756755,2.59349831675173,3.67654123079653,2.26016233240486,0.551365343546124,1.32687795048244,1.31535265576129,0.578775534266688,3.27947376023316,0.811641507850816,0.6196469961995,0.845086807596724,2.29458163526482,1.8667317792493,1.426684205925,2.12856638442359,0.422215270595328,1.64647446479951,0,1.39973888097993,1.53955380360819,1.34060455107157,2.17781969722645,7.43736026136555,0.43050537267123,0,0,1.60806380144872,1.52234282769651,0.764637207142375,1.70894156152249,2.38231775457789,2.87953591160336,4.53931317834902,2.16012574895246,3.17250070517708,2.7774258493143,3.84991942105343,1.47024129588619,0.557409525377156,1.15415370381156,3.05909926398181,0.956557636372934,1.79621434289535,0.383010740264733,2.75175657541048,0.324621940274555,0.280797178113459,0.684704037099577,0.47003968731907,2.50634477090067,0.846458889008016,0.321176150207399,0.80719882876419,2.12923118845163,1.71752672377882,0.614481528616916,1.11838053946208,0.834245708559542,0.781552381608161,1.11362469558097,9.84699191581699,1.89318974933188,1.6653598399891,4.22961015263549,0.748562161632879,4.68826173670061,0.485442086998054,2.34031106982705,0.852408440419239,0.23874448473769,4.75143489332222,2.76444631889309,3.97659059106519,10.690875647199,0.890469640183247,0.494411622680279,1.05562704063997,2.98871982376605,4.97311047956066,2.26739473068848,4.80662807760128,1.96935688737711,0.622079175323615,1.70749867179921,1.07412704805365,0,7.99011585659162,4.7896618469388,1.11136990144637,5.81599647657131,4.63840490809256,3.99227596002388,1.82299432759663,1.31189999994294,3.62499787717397,4.55173793141999,1.27126825146383,1.18193840883968,1.03423011972439,1.74962768029953,1.04174996959975,6.20018970069687,10.2506972831597,1.52581736317083,4.97606669690511,0.591095237907095,5.70402032600329,0.871507708151921,0.697118721393016,8.38757817691388,3.53220373125704,0,0.359030577639089,1.95565269459615,0.957003479195758,2.47313502185028,1.06606955203727,1.02193298195737,0.31396051279005,4.15529204750391,0.902382642468723,0.588187602953219,0.335643173951685,2.27704479269022,5.08597052737212,0.210998064528027,1.79556088975062,2.12029607150911,1.94749775767882,2.98578579323551,6.5458597732471,3.05515072466813,15.1225775627117,7.16670845889717,7.10069256637097,5.32468950547349,1.60515529459758,1.63985112007737,0.91227394607833,2.73930466504926,0.971121518136371,2.36750641709634,0,0.91821828489147,5.30767268879299,1.05226393590145,1.03688191397247,2.65861549082874,1.323967823502,0.313932918407225,1.19472429772959,2.84609546029793,1.24807205711825,1.04135843001079,2.05784034570193,0.609414446062818,2.27144668714639,1.54787429224455,0.387025325156341,1.09633975629278,0.656923656425674,4.17052770900203,0.794305140223502,4.29363407483012,0.822251547880505,0.19871461170299,4.36844492095563,1.56441106187842,2.08412932653988,4.26905989478705,3.19695375331408,0.288180834308212,1.60351234632282,0.686379991447858,0.288109595976299,0.99402028452346,0.235694034616795,1.63085047288337,1.882851233622,7.85386275799678,3.46740707881823,5.4037825983881,7.66670121795161,6.38732940334862,2.14882720709979,4.73197237702766,6.7027776305341,6.18733144831546,8.61447629492177,2.59582700648688,1.28767814440971,7.14148663813992,3.8294579317434,1.80149941771202,9.31967596219631,1.81201319306614,2.14281231791033,2.89835238572995,3.8386717790752,1.1007533168552,0.795229689809303,6.81017030557878,0.803765742325096,0.962776056180637,0,7.19916452964801,1.5476039091159,4.79921497598395,0.335434687599266,3.15222829196793,3.56691199317987,1.5840050477911,0.179287339332845,1.15149118391667,2.1440859791201,2.64836788146173,10.4250100438447,2.17199840701485,2.5926644736038,0.653174720218818,0,5.74647645245373,3.74853647927928,1.47305718976163,2.78449243988357,0,6.72271373080063,7.14056049410526,1.36869470307464,6.34333520085005,5.9800951037909,4.08731193259131,3.72815149812476,1.9846640872478,1.18566979138767,0.730755590285376,3.19170628885091,6.52821364043369,5.5151776684994,4.90152922821539,8.85256102916472,0.942324577501406,6.2024772597689,2.56255156294123,6.50992839673799,2.86704597845036,6.76667214374799,6.52012230884526,1.52183498429854,1.8747061194316,0.303298235083296,0.856396000634902,0.470531639396343,1.87333962322753,1.01444720027578,2.53733164907686,7.01139929541673,1.10961172300523,1.89403005275089,2.76724691927833,0.889811221596536,0.915360273587694,1.66354016139563,1.39893480524502,1.62640664988597,4.77890301491107,1.79921244865442,2.63947026689641,1.65882483136342,1.32920857278997,2.60872530905867,2.85489457094715,1.90402606084398,2.84809513243263,2.90957854724095,3.11490615423217,1.85613503951397,1.99047944349308,1.20008329398946,2.06037423109676,3.70424437642511,2.52369796457302,2.50405779529494,9.00654683774688,3.13193150358254,3.40058888268409,1.85217979459067,2.69210374957114,0.358177682162975,1.23520578864389,2.41212454536578,0.530067437837643,7.13781941602385,4.73038833828603,1.28120759293973,1.72715170865599,1.82315973706429,5.80685431837269,2.92290463259083,2.65729680626726,1.96278473107013,1.96565909307848,1.47463745252232,0.845248493434508,4.19973531295353,0.320075189082423,2.06657975592979,2.83757976783418,1.84105950251841,1.258915569475,0.622077260032973,2.17420431216208,0.646948868380091,2.51625506969434,1.52893493468819,1.3578602396322,2.12574920101683,1.48722917110803,1.67593475391973,1.90802610392051,3.31219329005264,0,2.82140754952547,2.7562092961788,5.26679645790968,1.41696576325585,7.50279137568611,3.48697819209284,1.00828678488687,2.97376185596137,5.81312324274664,2.85538840518309,4.71109048804923,3.65706142377995,0.733714394086716,1.61735932610474,2.66967466827017,0.690359926060101,4.57507310867432,4.73825068600321,1.41193548092464,0.781514011233092,0.261906694481422,0.818859587550484,2.21784129325568,3.98471749248528,2.34323429584154,5.78723030203315,4.6293541441552,1.09394961803644,4.38606213485746,2.97726707033577,0.879356221798103,0.894336993477167,3.21421101526972,4.37168838884471,1.82089681270989,1.36597314810779,1.50794029276486,2.18944576355981,4.45868824537288,5.23366943921604,3.68327531951955,0.590969204419841,1.22354542081276,6.35794052089164,6.75597036638808,0.840816489941367,4.56579360254748,2.80705868584208,0.9555033757741,4.50302228312935,1.26410889386181,1.62737995515375,11.8223625165754,11.2239591062235,2.27937780579341,5.63370974410035,8.2951159417691,0.860454717640555,0.591660003652827,2.30076192849726,5.50403165248208,0.4582137370881,0.62041277132864,0.955538938977433,0.782988022584546,0.490751168076215,3.16986604953901,5.17943069750316,5.13314034281235,3.4794432940146,2.4285549652957,0.701818390386317,2.58636007709779,0.356760272332706,3.9531128713636,2.30875085165401,3.01925687133347,2.39239890134628,4.37119121007915,0,7.84474629612498,1.17838273550813,3.14093547383912,8.91139200981258,3.8039015482506,1.69927114687817,2.34959794949634,2.8361470708374,1.89888196257365,2.32120120187355,0.705789743431384,0.722172300202514,7.30336388246517,2.2936464170227,4.87354582714934,0.631086248772738,4.35145537221854,2.18175345170189,2.645134202577,0.743990036333503,0.924351257262837,3.02838593486652,2.64949492153666,1.74824915141913,3.16746252528592,0.61193297845189,0.801652215796681,1.19463369395298,0.752122617877125,2.72803313585662,0.535928260312357,3.31667775783512,5.48194878068045,3.41174371041569,2.61870874610114,2.26061184426021,2.48298857183432,1.12131862580613,3.11871075563008,1.0105859447911,1.52401723527873,1.02669990325584,2.76143417359809,2.36683277795832,2.32862249582209,3.09332420721703,1.06727345877715,13.5150597600858,4.40143490322276,4.69281884806909,2.5670703278402,4.88275413978886,11.9836219353392,1.81146414231924,0.961705476909699 | |||
|short_description=p3@TAB2 | |||
}} |
Revision as of 14:31, 22 January 2014
Short description: | p3@TAB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TAB2_5end |
Coexpression cluster: | NA |
Association with transcript: | -141bp_to_ENST00000392282, uc003qmj.2_5end |
EntrezGene: | TAB2 |
HGNC: | 17075 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.07e-21 | 114 |
neural tube | 1.82e-10 | 56 |
neural rod | 1.82e-10 | 56 |
future spinal cord | 1.82e-10 | 56 |
neural keel | 1.82e-10 | 56 |
brain | 2.33e-10 | 68 |
future brain | 2.33e-10 | 68 |
central nervous system | 5.03e-10 | 81 |
regional part of nervous system | 1.68e-09 | 53 |
regional part of brain | 1.68e-09 | 53 |
nervous system | 4.85e-09 | 89 |
regional part of forebrain | 2.16e-08 | 41 |
forebrain | 2.16e-08 | 41 |
anterior neural tube | 2.16e-08 | 41 |
future forebrain | 2.16e-08 | 41 |
brain grey matter | 3.56e-08 | 34 |
gray matter | 3.56e-08 | 34 |
telencephalon | 6.15e-08 | 34 |
regional part of telencephalon | 3.08e-07 | 32 |
cerebral hemisphere | 3.72e-07 | 32 |
neural plate | 8.36e-07 | 82 |
presumptive neural plate | 8.36e-07 | 82 |
organ system subdivision | 8.38e-07 | 223 |