FFCP PHASE1:Hg19::chr6:149638776..149638863,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23118 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17075 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-199bp_to_ENST00000392282,uc003qmj.2_5end | |||
|description=CAGE_peak_1_at_TAB2_5end | |||
|id=chr6:149638776..149638863,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.58e-15!140;CL:0000766!3.37e-14!76;CL:0000557!3.38e-12!71;CL:0002009!6.82e-10!65;CL:0000839!6.92e-10!70;CL:0002031!8.97e-10!124;CL:0002194!3.96e-09!63;CL:0000576!3.96e-09!63;CL:0000040!3.96e-09!63;CL:0000559!3.96e-09!63;CL:0002087!9.94e-09!119;CL:0000037!3.46e-07!172;CL:0000566!3.46e-07!172;CL:0002057!6.68e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.79e-09;39!CL:0000234;1.79e-09;39!CL:0000860;1.78e-08;33!CL:0002057;1.78e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.33e-16,136;CL:0000766,5.30e-16,72;CL:0000557,6.86e-14,67;CL:0002009,1.96e-11,61;CL:0000839,2.40e-11,66;CL:0002031,9.32e-11,120;CL:0002194,1.30e-10,59;CL:0000576,1.30e-10,59;CL:0000040,1.30e-10,59;CL:0000559,1.30e-10,59;CL:0002087,1.16e-09,115;CL:0000473,3.33e-09,48;CL:0000234,3.33e-09,48;CL:0000037,7.70e-08,168;CL:0002032,2.92e-07,161;CL:0000837,2.92e-07,161;CL:0000763,3.29e-07,108;CL:0000049,3.29e-07,108;CL:0000988,3.89e-07,177;CL:0000860,6.68e-07,42;CL:0002057,6.68e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.28e-11!102;UBERON:0003061!2.28e-11!102;UBERON:0007023!4.45e-10!115;UBERON:0002371!5.49e-10!80;UBERON:0001474!1.59e-09!86;UBERON:0004765!6.98e-09!101;UBERON:0001434!6.98e-09!101;UBERON:0002193!1.50e-08!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.32e-12,98;UBERON:0003061,1.32e-12,98;UBERON:0002371,2.57e-11,76;UBERON:0001474,9.60e-11,82;UBERON:0007023,9.18e-10,114;UBERON:0002193,1.69e-09,108;UBERON:0001434,1.94e-09,100;UBERON:0004765,3.42e-09,90;UBERON:0002405,1.28e-07,93 | |||
|phase1_expression=8.53888382571616,11.3473277662221,8.3163098416623,3.00219895059391,5.36353313312745,6.97870819280295,0,3.15859936713415,1.56711376919903,1.47440361900905,2.09340350391728,1.96597234917155,1.31883489114227,4.57935505952172,11.5989081504771,8.0679017574213,3.61616716814386,5.11217063271161,8.78279037822912,3.69363174230364,4.08001382488506,3.13454721478088,6.86966369114536,8.89683762973747,6.52821725892975,8.09982100928283,7.14275128214528,7.32010266217217,7.08055698328027,14.5855171276941,17.3394058114005,4.59710612239464,1.8072355126695,2.58827807116751,4.26069603191659,4.12290774213522,2.34880351467878,46.5356143166777,40.3094339414985,28.2114131930607,25.0785331148715,19.7575136271578,25.4999811957845,8.43309784921475,7.55751887377619,9.46077838632483,24.4050488750969,14.3908760807639,17.3435567701258,14.3846196161075,6.40401766322752,12.0605937243178,24.8216890130365,12.9096936716765,23.0225027210381,16.0005988611214,7.64137220161968,10.562003768919,23.2623758201886,12.5162320559677,13.4260796417799,8.57613380485462,5.38551875578406,9.80316926225197,62.104777066517,53.3342111209671,47.3344909236637,9.79869794501299,8.86520961314342,9.99068685643537,44.1941636922359,39.773984686657,42.0894975296376,4.01385043992689,2.33864729961548,3.14487968262564,4.83013113929929,5.10601435661121,8.51845609494525,2.28010194992999,1.39241674039363,1.64397738388171,0,4.91524750135918,1.77901850772711,5.54749289336459,6.4063357925762,3.4485146397269,4.62731410949403,4.77026877267682,9.10740750575117,17.0298784917572,11.8504700718821,11.8954195721123,11.2101712596307,4.21414535640123,22.2282040228631,26.331721104194,22.4105633909465,48.1497106725153,13.6887351986108,9.46895611469466,15.5861382726329,45.6782873229212,13.8464776513173,15.2858387262699,15.4358202346059,52.0050758086241,50.4630268532328,26.6389405457955,19.3445012450094,21.7352314301289,5.33831627383417,5.08327573370455,9.40819714244791,30.820141213738,11.8798353016596,8.24705869158312,11.6389058328971,7.00843911513013,5.20866763085135,0.950452044448374,7.37818083481087,7.80718328041952,7.49584359314075,5.44587679701239,9.85353596305256,22.3783484979453,21.9300960542476,17.5237528698187,29.2568239576754,2.68280343881454,6.13740296848946,5.42158728576849,7.01873074890245,6.51809335323707,3.1811437882044,6.8128881842369,9.45348171640679,4.43458794925128,7.46595678391571,6.09052701064364,2.18577172975525,2.22470665670658,21.0955805875544,23.6816442727003,15.1572074991506,16.9328343256793,8.57992366170192,10.7722675385574,4.17401055470081,2.58070378531837,3.47140501607594,1.69592382577203,3.35599548967925,4.12677062910101,3.34391946458897,3.35941786920128,3.20189636418039,4.35136796594071,4.43112248820062,3.04108842287405,5.85748938115607,3.67663080345869,5.67099363517232,3.03619076165871,5.61323431565425,5.85579698513276,1.53316637465883,1.89853131913626,5.67925406184263,68.5258170667529,69.8004475466986,0,4.96971951695318,6.07826455989983,4.76673050927588,3.72887606973458,7.80270440836386,6.16745360156538,8.5399196583764,4.44001587150888,8.09148692039392,4.17603083416033,4.41347138406339,4.23800797405808,10.37116664064,3.28050004567315,4.99456122928513,3.99330275081114,5.08125513876124,4.69737994575059,3.88495066483516,2.66856532734272,5.30800845262722,4.54486974053541,9.19599452464312,19.0080457165129,17.308685049499,4.55080680969013,0.718618141816238,4.20840284885166,5.63033339423839,7.48073111807294,13.608306247306,9.19463387397059,14.7233297728465,4.76415169272088,4.84352016359927,6.62027905337559,11.0204588602972,3.30100205692843,6.28620428354477,5.15281080091258,9.86419338557426,6.75105328965065,7.2103383819287,7.06814567883521,8.28449087780694,9.05217918185347,7.10019185033229,11.485739197951,8.81715080014536,4.44499962275583,4.09119180886252,7.1701148847251,3.53723747775827,4.77107165957347,4.29917588617218,4.35376431064556,6.05570042101508,4.37972830890996,7.8224766164908,14.1513006402435,1.38134921352481,18.5747171212792,6.49691533502627,2.24782920075703,4.04603256187444,1.20505514941741,1.54411561825352,2.17879444092406,2.13543557199987,1.8876383142423,1.37355025587742,0.38474715694639,2.95262181849859,0,3.2925920906512,2.94017422771084,25.3510069643662,11.7939266001315,10.0434284135839,5.29755719297581,4.05861847192275,5.14703430895577,7.24351883696929,1.1240175325762,6.03173834469785,3.42577247086559,3.58389135841357,2.07986957055916,7.21656710126366,4.63721619900307,8.57083467921498,4.04226053731007,2.31492756288305,1.33177906564219,7.11183958163348,4.29243081047436,23.3906155783027,12.6362303175188,18.2816329615136,2.81201501960331,4.03157107677263,4.96212840348353,10.4783471562332,7.26584846284905,7.28427090413901,30.0524575116526,7.57216532513744,25.9160144425965,27.9592709628905,23.3548501838803,5.14332943766569,6.875791660049,3.51652341630141,8.55362230113526,3.496134751913,2.10240140490742,8.28896654628677,3.47606361470618,1.30788020649984,5.50037143657125,5.17086863031111,3.57656445851882,5.071816515336,5.31876233169741,4.16029747645464,2.57207374262142,1.41849132023278,1.5985330740966,5.57614175266775,2.17048642156577,1.64648067356154,3.58309802723109,4.97548728239564,2.37585561880029,17.1820444923964,7.84380112740265,22.793841989509,18.2435670961786,18.5835123829887,14.7583757638122,7.66799537573064,2.29723871668228,25.6746429073293,5.93603357337075,6.1642896765115,8.0577433457953,4.9317463357152,14.5802762549426,17.0345784139019,14.5027630996116,3.04913549066956,5.20559415430487,3.09315525111078,3.68535783735567,4.46557126157214,40.4463792931478,56.8406772487647,53.0451857198125,6.01188309423785,5.50187573165645,4.34024037919577,5.19927153827018,5.35286966391485,3.6271555457805,11.9484243292567,7.22270639346525,11.3703752027992,1.03473071292505,8.63493278096067,7.55913591020983,7.64575807319129,2.54541504701563,1.71571711905428,14.2669938024792,13.3742804507542,15.9024061127132,2.72814814301633,3.32870879020994,3.0239029332968,5.70647957983187,7.21271274453894,8.41980283299221,6.40695746278505,5.11707249066703,6.75586468803151,2.96836132889982,7.09364591492216,7.99027763909072,7.1450625732014,6.75030757938707,5.46188778761808,3.98836183652353,7.21823293091825,12.430933506346,4.24813458209045,6.55528204824181,7.86746489756545,1.80479845162965,3.61972084390749,3.92174884588428,1.46139224653261,2.74434235121477,1.13733384070897,1.36074964221213,5.82972973475776,1.54227252690289,1.35473218771926,0,1.78413391131527,1.66215201785745,2.46262230194396,3.50815802633495,1.8300481571743,3.59030175162945,2.95213181129735,1.62689197332152,13.0862084792607,10.8051968485645,11.0562729893588,9.18824860793876,6.50060246036521,8.03419649220798,6.57360884386429,4.31336127921004,4.45160656705776,4.41077031950498,4.18938954986267,7.39585138962565,6.13631717395926,4.5406338179836,7.76839102196597,12.684544446097,7.14631189969671,13.9597737580659,5.57814659156743,4.40737285562896,5.5762981612848,5.23657086299351,3.19383618190213,5.21959795245044,4.44778125849408,6.44061990338961,4.46590043231601,5.37845022021834,10.6752908597342,0.767693373934002,2.99557291623744,2.86382923133343,4.70969184119538,8.99362287916574,6.58888871366531,8.12905576185236,3.03273722359974,3.17020642346017,6.7401352998237,2.43816869544795,11.4545340126704,1.05650146756755,5.86949619054339,6.22183900596336,9.04064932961942,4.96228809191512,1.32687795048244,7.45366504931397,1.73632660280006,1.9676842561399,4.8698490471049,4.957175969596,1.69017361519345,3.58528380510129,5.60019533774791,2.49669736036875,1.06428319221179,7.59987487071591,7.24448764511784,0.75894634753143,3.49934720244983,4.90732774900111,2.68120910214315,1.08890984861323,14.498145319624,0.43050537267123,0,2.66058092122005,4.59446800413919,7.10426652925037,4.58782324285425,13.1018853050057,9.05280746739598,7.4045209155515,5.18778648954174,5.94034580961926,14.2762531732969,7.05038869441323,12.5122381184237,7.59624669541198,1.11481905075431,2.59684583357601,4.62421981764692,1.59426272728822,4.59032554295478,3.25559129225023,3.81012448902989,1.62310970137278,3.36956613736151,1.36940807419915,0.626719583092093,5.01268954180134,1.86220955581764,1.2847046008296,2.42159648629257,4.68430861459359,1.37402137902306,3.6868891717015,2.68411329470899,3.67068111766199,2.73543333562856,1.39203086947621,8.61611792633986,2.43410110628385,3.3307196799782,7.04935025439248,2.05854594449042,9.96255619048879,0.606802608747567,10.8100082749154,1.70481688083848,4.05865624054073,9.2059051058118,7.06469614828234,6.95903353436409,21.663090127219,3.56187856073299,5.93293947216335,2.74463030566391,11.556383318562,14.3667636076197,5.03865495708552,15.851645787834,5.90807066213134,5.28767299025073,5.75157447342892,5.01259289091706,1.53471711068062,19.5313943161129,4.7896618469388,12.2250689159101,7.75466196876175,9.55511411067068,5.98841394003583,6.77112178821606,3.58585999984402,3.62499787717397,10.1276168974095,6.86484855790469,0.945550727071745,0.689486746482929,4.66567381413207,1.90987494426621,8.85741385813839,19.7778159345669,3.05163472634166,8.5146030147043,4.43321428430321,8.33664509185096,2.83240005149374,4.46155981691531,17.5446589388657,10.7105532496181,1.1528195219403,1.97466817701499,3.15077378573823,4.46601623624687,9.15975934018623,6.92945208824225,1.02193298195737,2.66866435871542,5.48498550270516,2.03036094555463,2.35275041181287,3.18861015254101,4.74384331810463,13.0327994763911,2.95397290339238,3.26465616318295,5.93682900022551,3.67860687561555,8.95735737970654,13.5340073690109,9.77648231893801,34.3964509269521,17.5460793304034,14.2013851327419,10.9189835428697,6.42062117839031,8.43352004611221,2.18945747058799,8.41357861407986,2.91336455440911,7.10251925128903,9.67925728389311,4.89716418608784,15.0384059515801,5.71228993775072,2.69589297632843,12.6284235814365,3.64091151463049,6.27865836814451,7.16834578637753,13.9458677554598,4.02156551738102,6.94238953340524,9.99522453626652,2.08942095792966,8.38688007561745,7.05142733133628,2.22539561964896,3.06975131761979,3.03827191096874,12.2206160775408,2.29465929397901,7.90932592731864,4.52238351334278,4.96786529257474,8.48364665808775,7.62650392665732,7.45477028339264,9.60538476327087,7.39295555453882,0.864542502924636,4.00878086580705,3.60349495510126,1.58460277786965,5.59136410044446,3.53541051925193,6.65930609760709,6.69458216398932,12.3417843339949,12.1359247758638,7.20504346451747,17.7976992559591,25.5493176133945,12.4631978011788,13.6701424225244,12.5677080572514,10.9997003525608,14.3574604915363,7.78748101946065,5.57993862577542,14.9524876486055,8.86821836824787,9.00749708856009,6.98975697164723,6.46022094919234,5.85152594506282,7.07737210468941,9.64589318844538,3.13291328643403,11.9284453471395,17.2978325761701,2.41129722697529,3.02586760513914,1.24632101408756,50.8440994906391,13.1546332274851,7.77594325222716,3.35434687599266,10.0083248269982,8.1829157490597,8.02562557547489,0.537862017998534,8.25235348473615,4.2881719582402,6.62091970365432,15.7646493345945,3.80099721227599,4.32110745600634,4.57222304153173,7.18381149374925,17.3215218781105,9.54172921998362,5.09904411840566,12.456939862637,0,11.3769001598164,17.1902382265497,3.93499727133958,13.3914854240168,11.2126783196079,7.07419372948497,8.28478110694391,8.93098839261511,6.12596058883627,3.89736314818867,8.29843635101236,19.5846409213011,12.2838048071123,14.3982421078827,11.4755420748432,6.28216385000937,7.08854543973589,5.00307686098049,15.8992481997255,7.45431954397093,15.9737834213067,9.3765568441489,4.15045904808692,6.99890284587797,6.52091205429086,3.42558400253961,2.82318983637806,4.68334905806882,2.17381542916238,6.56721132702246,13.7890852809862,4.43844689202091,8.52313523737901,9.81114816835043,0.889811221596536,5.03448150473232,5.29308233171337,8.08273443030458,5.32278539962682,10.194993098477,12.5944871405809,12.1105106363482,7.87941794897625,10.6336685823198,8.86966605079948,9.7667445848192,11.8049615772327,9.76489759691188,10.5472222337484,11.2781084894613,7.88857391793439,9.9523972174654,7.20049976393677,10.9886625658494,11.4494826180412,10.0947918582921,6.93431389466292,29.5929396097397,13.0497145982606,9.97506072253998,8.79785402430569,11.013151702791,3.22359913946677,6.48483039038042,8.11350983441216,5.65405267026819,14.4685528703186,10.3054888798374,5.12483037175893,2.41801239211839,10.331238510031,14.5171357959317,15.9785453248299,19.1325370051243,18.3193241566546,16.708102291167,6.3900956275967,7.39592431755195,27.5982606279803,0.960225567247268,11.7106186169355,14.1878988391709,10.4940391643549,4.61602375474167,4.35454082023081,4.09261988171685,1.61737217095023,7.23423332537123,6.00653010056076,5.09197589862076,7.65269712366058,4.46168751332408,8.37967376959866,6.67809136372179,5.04715168008021,0.80057074828547,4.58478726797889,4.8999276376512,8.28557003744328,4.25089728976755,16.4422874828866,4.1023272848151,5.79764901309952,6.08583821685117,9.04263615538366,8.56616521554926,15.507339523162,9.67351731451471,6.23657234973709,11.8991436134848,11.0600807685478,4.8325194824207,8.15556510676726,13.9891210729618,6.0511520611056,3.12605604493237,0.785720083444267,4.25806985526251,9.4627895178909,8.98249875424649,2.34323429584154,16.7416305165959,7.16598655191147,3.82882366312754,28.5094038765735,6.45074531906083,1.75871244359621,7.28245837545693,5.89272019466115,9.41594422212707,2.42786241694653,6.37454135783633,5.49954695008361,8.18161311646033,18.1777290003664,10.5353086114089,4.66986692296229,1.77290761325952,3.33694205676207,17.0330011485615,11.6265536537841,4.76462677633441,10.9579046461139,6.0459725541214,4.29976519098345,8.07684949196217,3.16027223465453,4.18469131325251,17.3858272302579,19.2410727535261,9.94637587982577,9.2187977630733,35.2542427525187,9.03477453522583,4.96994403068374,4.34588364271704,10.1612892045823,3.43660302816075,4.34288939930048,8.5998504507969,5.8164824534852,1.57040373784389,6.70548587402482,14.8908632553216,12.3195368227496,2.3196288626764,8.25708688200537,1.16969731731053,4.57586782871147,1.66488127088596,5.87319626602592,2.30875085165401,15.5491728873674,8.41198323376597,3.93407208907123,0.940634592723046,15.444344270496,5.65623713043902,9.03018948728748,22.8725728251856,6.7624916413344,8.49635573439084,7.51871343838829,7.15482556506707,4.29746970477194,14.6414229656639,2.11736923029415,2.00603416722921,11.6853822119443,14.2206077855408,12.9005624836306,3.78651749263643,6.59517454851873,3.9271562130634,6.87734892670021,8.55588541783528,8.78133694399695,3.8936390591141,4.54199129406284,3.16870158694717,5.57473404450323,2.2437542543236,0.801652215796681,1.65410819162721,2.75778293221613,7.5020911236057,4.28742608249886,7.46252495512901,14.790918408251,8.10289131223727,6.42773964952099,5.42546842622451,5.02805185796449,5.38232940386944,10.1835453245064,8.69103912520343,5.87835219321796,9.24029912930259,6.66785324844416,9.03699787947722,4.9899053481902,11.3150543369255,7.47091421144008,19.307228228694,8.44356899801917,7.03922827210363,6.72327943005765,7.73102738799903,21.3042167739364,9.25859450518721,6.09080135376143 | |||
|short_description=p1@TAB2 | |||
}} |
Revision as of 14:31, 22 January 2014
Short description: | p1@TAB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TAB2_5end |
Coexpression cluster: | NA |
Association with transcript: | -199bp_to_ENST00000392282, uc003qmj.2_5end |
EntrezGene: | TAB2 |
HGNC: | 17075 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.33e-16 | 136 |
myeloid leukocyte | 5.30e-16 | 72 |
granulocyte monocyte progenitor cell | 6.86e-14 | 67 |
macrophage dendritic cell progenitor | 1.96e-11 | 61 |
myeloid lineage restricted progenitor cell | 2.40e-11 | 66 |
hematopoietic lineage restricted progenitor cell | 9.32e-11 | 120 |
monopoietic cell | 1.30e-10 | 59 |
monocyte | 1.30e-10 | 59 |
monoblast | 1.30e-10 | 59 |
promonocyte | 1.30e-10 | 59 |
nongranular leukocyte | 1.16e-09 | 115 |
defensive cell | 3.33e-09 | 48 |
phagocyte | 3.33e-09 | 48 |
hematopoietic stem cell | 7.70e-08 | 168 |
hematopoietic oligopotent progenitor cell | 2.92e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.92e-07 | 161 |
myeloid cell | 3.29e-07 | 108 |
common myeloid progenitor | 3.29e-07 | 108 |
hematopoietic cell | 3.89e-07 | 177 |
classical monocyte | 6.68e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.68e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.32e-12 | 98 |
blood island | 1.32e-12 | 98 |
bone marrow | 2.57e-11 | 76 |
bone element | 9.60e-11 | 82 |
adult organism | 9.18e-10 | 114 |
hemolymphoid system | 1.69e-09 | 108 |
skeletal system | 1.94e-09 | 100 |
skeletal element | 3.42e-09 | 90 |
immune system | 1.28e-07 | 93 |