FFCP PHASE1:Hg19::chr6:143857883..143857900,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9749 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20956 | |||
|TSSclassifier=strong | |||
|UniProt=O75167 | |||
|association_with_transcript=-81bp_to_ENST00000367584_5end | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_3_at_PHACTR2_5end | |||
|id=chr6:143857883..143857900,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.02e-09!18;CL:0000789!1.02e-09!18;CL:0002420!1.02e-09!18;CL:0002419!1.02e-09!18;CL:0000790!1.02e-09!18;CL:0000625!1.67e-07!11;CL:0000084!3.58e-07!25;CL:0000827!3.58e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.65e-14;18!CL:0000789;1.65e-14;18!CL:0002419;1.65e-14;18!CL:0000084;1.30e-09;25!CL:0000624;9.35e-09;6!CL:0000625;1.03e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.27e-14,18;CL:0000789,1.27e-14,18;CL:0002420,1.27e-14,18;CL:0002419,1.27e-14,18;CL:0000790,1.27e-14,18;CL:0000084,1.08e-09,25;CL:0000827,1.08e-09,25;CL:0000624,6.27e-09,6;CL:0000625,1.07e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.65e-14;18!UBERON:0006215;5.71e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004733;3.21e-08;12!UBERON:0002028;3.21e-08;12!UBERON:0001896;1.44e-07;3!UBERON:0005290;1.44e-07;3!UBERON:0004732;1.72e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,1.97e-08,12;UBERON:0002028,1.97e-08,12;UBERON:0007277,1.97e-08,12;UBERON:0004732,1.10e-07,13;UBERON:0001896,1.26e-07,3;UBERON:0005290,1.26e-07,3;UBERON:0010096,1.26e-07,3;UBERON:0001017,3.69e-07,81 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.492484232307152,0.408001382488506,0,0.286235987131057,0.821246550437305,0.753255837568817,0.229240217243854,0.246301768349837,0.314843125254717,0.393364276848904,1.15148819429164,0.154816123316076,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0.447830948479849,0.647787332037959,0.257575567634187,0.290796477559129,0.377875943688809,0.485168122375632,0,0,0.619412741790207,0,0,0,0.344745680736619,0,0,0,0.272906150057846,0,0.306083892370903,0.320929027076094,0.639337125799041,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0.212604299965044,0,0.44931452458598,0.300353785683013,0.32145117339416,1.14005097496499,0,0.182664153764634,0,0,0,0,0.400395987036012,0,0.661044872784862,0,0.569212969109448,0,0,0,0,0,1.57367816091066,1.57204305099666,1.23360899399706,1.17030546773475,0.651844533267181,1.4203434172042,0,1.11410456885174,3.24066498222321,2.65840673500345,4.06205795647523,2.30564375506215,1.56071217071854,0.493313713811028,0.276350017785848,0.869409257205157,0.14828656316206,0.535081656179426,0,0.566546713487831,3.44898444241729,3.77990190030893,3.03623630423403,2.54852331459277,2.60433381542567,0.950452044448374,0.903450714466637,1.15187950038977,3.74792179657038,0.947109008176067,0.821127996921047,2.62088766192152,1.06976078313403,1.59306844271079,0,0,0,0,0,0,1.5905718941022,0,0.850813354476611,0.886917589850256,0.43917392846563,0.458426764241994,0,0,0,0.174129737299267,0,0,0,0.371457501329565,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0.35576626268671,0.66944122552934,0,0,0,0,0,0.267899184852239,0.44905874525234,0.563057402416611,0,0,0.183201743930407,0,0,0,0.496971951695318,0.25326102332916,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0,0,0,0,0.756787138224657,0,0,0.312160076830321,0,0.149448680551801,0.822041490506354,0.485618833104395,0.140450806702248,0,0.245668634623536,0.103325781175765,1.18800285728205,0.741800787835671,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0.438977620880838,0.30648779579902,0.150238058906597,0,0.358779271377724,0.213557388818567,0,0,0.309157587715317,0.257640540045629,0.744467425326359,0.843881661206331,0.292311015483596,0,0.276149695926898,0,0.355009592516614,0.403008392910561,0.508681776931463,0.193260853163297,0.818238361772504,0.286804595389004,0.243947412259191,0.397589304964456,0.464775771478074,0.10366105501537,1.00928340350251,1.09493207722749,0,0,2.76269842704961,0,0,0,0.168584690078102,0.482022059766964,0.110293972732394,0.217879444092406,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0.982827216677626,0,0,0.491953754172454,0.171567810298526,0.329250856225877,0,0,0.185176890317059,0,0,1.44331342025273,0.927443239800615,0,0.144366447761074,0,0.190254152234598,0,2.57545848628462,0,0,0,0,0,0.283550194484773,0.268675568108545,0,0.766765358330422,0,0.264145302039678,0.207328115540772,0.432359860250884,0.37872730027914,0.063497894292169,0,0,0,0,0,0,1.90622843387113,0,1.24675085895615,0.258543431515556,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0.325736184293735,0,0,0.602878754119172,0,0,0,0,2.10833939483032,0.479249710983165,1.14861935834114,0,0,0.205476322550383,0,0,1.57624608161542,1.07813787429759,1.15508732651774,2.03275699377971,3.90419561572865,0,0,0,0,0,0,0.24538298343828,0,0,0.415941723061614,0,0.157702415033935,0.234282829985426,0,2.27407504055985,1.03473071292505,1.99267679560631,0.553107505625109,0.260650843404249,0.195801157462741,0,0.82707210449155,0.431428401637234,1.28073069364133,0,0,0,0,0.920771839728375,0,0.640695746278505,0.511707249066704,0.482561763430822,0,0.154209693802656,0,0.328508624055237,0,0.116210378459959,0.483437798366489,0,0.644566922551274,0.114814448164607,0.182091168006717,0.393373244878272,0,0.231046011313244,0,1.46139224653261,0.316654886678627,0,0,0.431831832204279,0,0.270946437543853,0.501689773854853,0.509752546090077,0,0,0,0,1.02580050046556,0.656029291399411,0.650756789328606,0.412164046590889,0.54941678891006,0.990113999047056,0.574265537996172,0.650060246036521,0,0.290012154876366,0.154048617114644,0.307007349452259,0.275673144969061,0,0.145016693914229,0.340906509664404,0,0.330569830721956,0.384380134730212,0.382838137483752,0.4046311234222,0,0.62962469366128,0,0,0,0,0.18532421910392,0.286249773483982,1.48863347743867,0.949138274156178,0,0,0,0.318203247925937,0,0,0,0.353437207037059,0,0,0,0,0.243713489631284,0,0.545999645631943,0.141405431953713,0,0,0,0,0,0,0.405820753925408,0.6196469961995,0,0.143411352204052,0,0,0.709522128141196,0.211107635297664,0,0,0,0.192444225451024,0,0,0.282431402330337,0.43050537267123,0,0,0,1.01489521846434,2.29391162142713,0,0.714695326373367,2.05681136543097,0,0.540031437238115,0,0.854592569019785,0.962479855263359,0,0.185803175125719,0,0.924843963529383,0.159426272728822,0,0.766021480529467,0.846694330895531,0,0.561594356226918,1.14117339516596,0.156679895773023,0,0.338583555603207,0.1605880751037,0,0,1.37402137902306,0.614481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| |||
|short_description=p3@PHACTR2 | |||
}} |
Revision as of 14:22, 22 January 2014
Short description: | p3@PHACTR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PHACTR2_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -81bp_to_ENST00000367584_5end |
EntrezGene: | PHACTR2 |
HGNC: | 20956 |
UniProt: | O75167 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.27e-14 | 18 |
alpha-beta T cell | 1.27e-14 | 18 |
immature T cell | 1.27e-14 | 18 |
mature T cell | 1.27e-14 | 18 |
immature alpha-beta T cell | 1.27e-14 | 18 |
T cell | 1.08e-09 | 25 |
pro-T cell | 1.08e-09 | 25 |
CD4-positive, alpha-beta T cell | 6.27e-09 | 6 |
CD8-positive, alpha-beta T cell | 1.07e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
segmental subdivision of hindbrain | 1.97e-08 | 12 |
hindbrain | 1.97e-08 | 12 |
presumptive hindbrain | 1.97e-08 | 12 |
segmental subdivision of nervous system | 1.10e-07 | 13 |
medulla oblongata | 1.26e-07 | 3 |
myelencephalon | 1.26e-07 | 3 |
future myelencephalon | 1.26e-07 | 3 |
central nervous system | 3.69e-07 | 81 |