FFCP PHASE1:Hg19::chr6:139456226..139456300,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51696 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21041 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UBI9 | |||
|association_with_transcript=0bp_to_ENST00000367658,NM_016217,uc003qin.2_5end | |||
|coexpression_cluster_id=C838 | |||
|description=CAGE_peak_1_at_HECA_5end | |||
|id=chr6:139456226..139456300,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.25e-39!140;CL:0002031!1.71e-32!124;CL:0002087!6.01e-32!119;CL:0000037!1.25e-29!172;CL:0000566!1.25e-29!172;CL:0002032!5.00e-27!165;CL:0000837!5.00e-27!165;CL:0000766!2.13e-26!76;CL:0000988!4.94e-26!182;CL:0002057!3.24e-23!42;CL:0000557!5.79e-23!71;CL:0002009!1.09e-21!65;CL:0000839!4.05e-21!70;CL:0002194!1.19e-20!63;CL:0000576!1.19e-20!63;CL:0000040!1.19e-20!63;CL:0000559!1.19e-20!63;CL:0000860!8.08e-20!45;CL:0000763!1.48e-16!112;CL:0000049!1.48e-16!112;CL:0000791!9.95e-11!18;CL:0000789!9.95e-11!18;CL:0002420!9.95e-11!18;CL:0002419!9.95e-11!18;CL:0000790!9.95e-11!18;CL:0000838!1.95e-10!52;CL:0000542!4.92e-10!53;CL:0000051!4.92e-10!53;CL:0000084!9.20e-10!25;CL:0000827!9.20e-10!25;CL:0000625!4.50e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.68e-17;33!CL:0002057;3.68e-17;33!CL:0000473;8.61e-15;39!CL:0000234;8.61e-15;39!CL:0000576;2.33e-14;48!CL:0000766;7.14e-13;69!CL:0000791;9.38e-11;18!CL:0000789;9.38e-11;18!CL:0002419;9.38e-11;18!CL:0002087;2.62e-10;104!CL:0000084;9.01e-10;25!CL:0000738;2.43e-09;136!CL:0000625;4.38e-07;11!CL:0000542;5.58e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.82e-42,136;CL:0002031,6.97e-35,120;CL:0002087,2.21e-34,115;CL:0000037,2.15e-31,168;CL:0000766,2.28e-29,72;CL:0002032,9.83e-29,161;CL:0000837,9.83e-29,161;CL:0000988,7.77e-28,177;CL:0000557,8.76e-26,67;CL:0002009,1.40e-24,61;CL:0000839,8.50e-24,66;CL:0002194,1.66e-23,59;CL:0000576,1.66e-23,59;CL:0000040,1.66e-23,59;CL:0000559,1.66e-23,59;CL:0000473,2.15e-23,48;CL:0000234,2.15e-23,48;CL:0000860,3.24e-23,42;CL:0002057,3.24e-23,42;CL:0000763,3.83e-18,108;CL:0000049,3.83e-18,108;CL:0000791,9.94e-11,18;CL:0000789,9.94e-11,18;CL:0002420,9.94e-11,18;CL:0002419,9.94e-11,18;CL:0000790,9.94e-11,18;CL:0000838,1.95e-10,52;CL:0000542,4.92e-10,53;CL:0000051,4.92e-10,53;CL:0000084,9.20e-10,25;CL:0000827,9.20e-10,25;CL:0000625,4.50e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;5.89e-17;42!CL:0000790;9.38e-11;18!CL:0000051;5.58e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.31e-27!102;UBERON:0003061!2.31e-27!102;UBERON:0002193!1.75e-24!112;UBERON:0002371!9.04e-21!80;UBERON:0001474!3.35e-20!86;UBERON:0007023!5.24e-20!115;UBERON:0004765!4.67e-17!101;UBERON:0001434!4.67e-17!101;UBERON:0002405!5.59e-13!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.38e-30,98;UBERON:0003061,8.38e-30,98;UBERON:0002193,1.38e-26,108;UBERON:0002371,3.67e-23,76;UBERON:0001474,1.99e-22,82;UBERON:0002405,2.20e-21,93;UBERON:0004765,2.33e-21,90;UBERON:0007023,9.50e-20,114;UBERON:0001434,5.82e-19,100 | |||
|phase1_expression=14.1709135831034,13.274232481241,13.6725771973092,11.0080628188443,13.4088328328186,8.72338524100369,5.06599756336621,5.05375898741465,5.74608382039645,3.44027511102112,4.18680700783456,5.89791704751465,3.69273769519835,19.9263828265675,26.8431874339612,9.41255205032485,8.43772339233568,6.57279081348636,10.7345215733912,4.67860020691794,5.91602004608334,6.58254915103984,8.30084362680065,6.70684682857133,8.66244213204139,4.58480434487708,4.51553241974702,4.48651453487972,90.080419398399,93.2705437376227,144.443443053899,6.43594857135249,4.51808878167375,3.32778609150109,15.0286369125785,10.9470309015315,28.1856421761453,163.982640925436,221.200525559566,223.738207708043,38.7373770435069,34.6566222640308,43.0151197949092,141.617884571296,119.030922261975,127.841800245979,145.268148066053,138.974746151377,129.147556663258,101.843106882041,85.3015152741905,59.8300041618121,163.064706988421,118.12369709584,144.906340655946,144.005389750093,97.7004017207088,72.3609619913173,170.488728050593,101.413572556046,138.736156298392,128.312155772633,101.925929044654,112.949558891164,102.44386123589,88.5120950518178,97.1602708433097,109.041920721427,75.6150231709292,65.5910311009452,103.523314950306,67.7630850217119,77.5332849230167,47.5324394201869,66.1199372891285,53.2532959591275,65.7122492206996,73.7368543851796,59.4684670779196,78.9485300163258,86.7276712588033,65.5764312015036,29.9193615584249,36.5912869545628,44.4754626931777,41.3928315889512,36.8364308073131,40.2326707968138,50.2394103316495,39.1162039359499,151.979862752223,146.809297342735,140.676547950084,43.6165384310785,77.9106902544335,16.8565814256049,251.198376435365,301.832265791359,304.907023016272,45.9762862324365,141.776185985612,128.777803159847,126.637373465142,51.4716310809502,116.663939360036,115.419159078067,74.2002586716143,100.295503345204,88.0501782980376,68.5706062197329,69.9165544998196,48.3971153177538,147.841703472574,167.74809921225,148.440443803067,56.428052663388,146.773449049536,140.543625202396,92.099167895099,76.4556994377832,81.3854317320523,94.094752400389,80.4071135875307,76.2800202480334,71.2105141348371,68.1918485886769,69.795879738289,190.719979090597,262.893712455188,237.656846771673,34.1329612839546,5.36560687762909,5.24236503558474,7.22878304769133,7.52006865953834,10.1392563272577,7.95285947051099,14.1124112387764,4.25406677238305,5.5432349365641,7.55379156960884,19.2539240981638,4.73583874780305,8.52804218404188,41.2175189941448,38.6568016804373,28.8518774325937,67.0158654298011,46.9035826839705,56.0900827007643,5.96287222100115,3.4409383804245,6.94281003215189,14.1326985481002,4.61449379830897,8.25354125820202,3.9709043641994,13.6960882359744,12.4518191940349,9.37217715741077,8.86224497640123,5.32190474002959,13.4234131651493,5.51494620518803,5.67099363517232,12.1447630466348,17.5132910648412,17.116945033465,0,8.54339093611316,12.0913150994069,359.760539600453,383.902461506842,9.15797509499322,26.8364853915472,4.05217637326655,3.44263870114369,5.44989579422746,12.4133933769425,6.72813120170769,5.33744978648525,3.20667812942308,11.2035972743916,16.7041233366413,11.4423332179421,9.68687536927561,14.98057403648,3.51482147750695,9.05264222807929,0.570471821544449,8.96692083310806,11.3911463684452,8.25552016277471,7.72479436862367,7.14539599392126,6.5102188175237,12.9157226469707,7.12801714369232,7.41800787835671,2.73048408581408,3.59309070908119,7.23845290002485,9.88436306988517,3.3247693858102,7.02364193409341,7.96868269077451,16.6764245386322,3.51639767796065,9.86642996288741,8.5422955527427,6.14602513362729,7.80236849819446,5.46178404963726,7.9868567414145,10.9808945235638,4.55696097051419,5.35903528386592,5.04867548488229,13.8995346949872,9.21382523867228,4.61512470271599,5.94437379543078,4.91725717700414,17.9732593441866,9.00062197949754,16.3478619371732,4.14710600840624,3.04818467139416,4.99633954338929,5.90868013587612,5.2987378683882,2.55484151353081,1.56449532329816,11.5783368874719,2.76269842704961,12.0735661288315,9.38443326170461,2.12952240071719,2.02301628093722,1.20505514941741,2.31617342738027,2.17879444092406,2.13543557199987,1.48314438976181,1.96221465125346,2.30848294167834,13.2867981832437,9.81692416624121,4.5273141246454,2.94017422771084,2.53510069643662,9.82827216677626,15.9513274803979,12.3609667836102,3.44367627920718,3.25978839567199,8.45077197646417,2.24803506515239,10.6560710756329,8.61072539974325,2.93227474779292,5.19967392639789,5.77325368101093,5.68058984377876,6.80970426567766,6.0633908059651,6.01881166349594,7.80042024161853,3.95102198979638,6.00940313466411,24.3754836026523,16.6143028248859,25.1186664267951,12.185398418281,5.71139235876122,5.10390350072591,5.82130397568514,7.26584846284905,4.60059214998253,7.38994856843915,15.6726212543542,96.2002456109182,94.5426894415267,86.8547941973494,6.3497894292169,7.63976851116555,7.03304683260282,6.84289784090821,6.16964956219941,2.70308752059526,12.5763630357454,5.7186853016134,8.7192013766656,5.35369486492935,4.39523833576444,10.7296933755565,0,14.0947201789981,20.8014873822732,4.37252536245642,7.09245660116391,3.46348832720929,4.57529579706072,2.17048642156577,3.29296134712308,3.90883421152482,3.55391948742546,2.37585561880029,6.02878754119172,0.871533458600294,8.19778527692868,21.8922805154143,25.6151116630384,23.1917333431335,4.0736225433569,13.7834323000937,37.0855953105868,2.89562613335158,8.83548186966649,5.01370697071708,20.2874110628284,145.802762549426,228.780856925948,190.589408875426,8.38512259934129,11.712586847186,14.6924874427762,13.0662686960792,20.4140400529012,286.120683147824,263.262084099542,333.190072802573,12.3918406636331,29.5100607425209,16.8184314693836,39.930405413915,21.0546206780651,23.0245525949545,21.4368789436665,6.62081419400982,2.27407504055985,10.3473071292505,3.98535359121262,6.63729006750131,6.34250385617005,5.286631251494,10.2943027143257,121.579599360258,159.412794404958,161.798977630022,10.3063374291728,3.32870879020994,4.83824469327489,9.6762045049323,7.67309866440312,15.155645099386,10.2511319404561,5.11707249066703,9.32952742632923,10.3892646511494,5.39733928309294,4.43904313282818,6.65229963711854,1.03850885836724,7.08883308605751,1.57117284469109,9.02279116364782,17.3112259199485,1.14814448164607,2.36718518408732,7.73634048260602,4.51199612907412,3.46569016969866,3.13739907670742,5.84556898613043,4.96092655796516,12.5106722477986,8.33459155854927,9.93213214069841,9.25363516141736,2.16757150035082,2.50844886927427,4.07802036872061,4.15538004464362,3.58199607555485,11.6207734622345,12.5489016491952,3.59030175162945,1.96808787419823,4.22991913063594,32.3548776573848,24.0827692472243,19.3072229814176,5.16838984196555,9.75090369054782,14.4615536859744,5.60690166094307,8.01052808996151,11.819782953912,6.89182862422653,8.70103983433016,11.7463522070525,9.289702388355,9.79352392114111,5.45440220691228,14.6064451197481,10.5918551370505,16.2864027177435,5.57814659156743,2.51849877464512,3.485186350803,5.23657086299351,1.59691809095107,2.60979897622522,4.81842969670192,4.57999637574372,7.81532575655301,5.06207079549961,7.81583795087682,2.55897791311334,14.9778645811872,4.77304871888905,2.35484592059769,4.67668389716618,5.21620356498504,4.3590588867904,1.41527737101321,1.58510321173008,2.52755073743389,2.43816869544795,4.6305563029944,1.05650146756755,6.14249601335936,3.39373036688911,10.1707304958219,6.06501877900737,1.99031692572366,3.06915619677634,4.6302042741335,16.3973688011658,2.23201414658974,6.50629346009475,3.09865162785466,2.58140433967293,2.94747123039363,1.07001315444375,3.19284957663538,16.4663955532178,19.7576935775941,3.79473173765715,5.59895552391973,4.23377295992253,8.04362730642945,6.53345909167936,31.3498856586675,6.88808596273968,5.05414427002877,11.5291839919536,13.7834040124176,90.3256744433262,77.2283579213799,119.0562621194,85.5252073893462,80.2156432518079,95.3255767453294,83.7048727719078,115.003150562669,13.6734811043166,2.88743956579008,25.7292226780083,6.68891430452587,8.80042199156314,21.9116877513115,6.85532972733936,7.1848573715814,8.23473091569177,19.897316776045,7.79092656658933,7.58152380906339,34.463436534012,4.38703708164465,12.5317238545034,3.72441911163527,11.5623414074664,20.3817704262958,18.7372344583744,7.21361223987106,7.68101910771145,6.48660712888006,8.67615536901924,4.68931428964897,3.34087408674291,3.69262196843137,3.51592382018778,7.99372723194768,26.7875309666914,19.6497567428631,34.2829139496232,3.15537356548735,40.1196183398922,19.6053941296425,32.9467388938012,17.5209161691257,20.5797670406485,13.9180670687282,24.8984867046608,8.68207899178666,22.0837191463858,4.43363357068786,60.9698844048273,29.0098111307705,4.28285671352269,7.56788250515945,8.24668196589166,9.33118762985422,3.6846023970404,3.58042349351218,10.7430197747643,30.9740293699972,158.05884094898,18.8932883245883,36.8346443516183,18.739155828694,39.9227596002388,16.9278044705402,7.17171999968805,89.1749477784796,12.1758989665485,4.57656570526979,13.7104855425403,17.2371686620732,30.0352751784752,12.8482496250636,14.1718621730214,19.5366230573161,13.7323562685375,20.0148460475517,22.7571666594232,27.8619454385545,4.79329239483557,21.0529853860691,24.0854309116885,5.69710279235006,5.99466151408956,7.36012684160132,3.80265801727028,22.3300811812344,18.3195186803725,23.4535301448199,9.19739683761629,13.3433217935771,20.4440368737192,0.225595660617181,0.980312671588698,0.839107934879214,3.60532092175952,6.6753363171759,5.90794580678476,8.32487321611653,1.97894300007517,8.65554558968364,45.7820488296112,38.0367527364358,56.2147733338935,17.1982254634761,7.53740027573667,5.74320722280005,16.0414696494011,44.9443482487322,13.118808960619,12.042016088234,10.5658894223328,3.88448607254548,16.9671293225238,36.2972148145992,22.3433115990258,39.8707317455759,10.071669100771,9.33193722575224,19.2749623085084,11.915710411518,15.6966459203613,21.5050373591326,3.69992409838731,7.48843234270949,3.12407529003236,16.7566999578586,8.00944700539704,20.2682935160755,7.22341336380789,3.96700958285249,5.26243083020536,4.51635013792651,32.6852985565973,0.176512253383001,18.0784592624426,7.67434778021805,18.0830296649721,17.5370904797784,10.950877433149,3.04603516955828,22.8394704371107,4.99524023955326,3.74635084600676,1.60351234632282,6.52060991875465,6.91463030343119,7.57940466949138,16.7342764577925,6.52340189153347,4.81173093036733,5.20190909945241,5.49006120812886,28.2197535693601,26.8334542628306,47.2662375847798,17.6203830982182,10.5154941711726,43.2887721971994,29.5616946975072,40.9187624008784,31.5492820788406,52.3655778726616,63.8270368283755,42.1240372491774,14.7722952252385,5.82479747637269,0.393915911536118,0.164831716762333,0.539228350833479,7.97262600269465,7.70527321798639,20.6759719350419,37.0473264623486,6.75163223553081,8.38990563243126,7.06248574649615,78.5158881514737,132.320134229409,15.6126360611123,17.7780384427611,9.29907346130538,14.5823755015295,9.7152309597854,1.79287339332845,22.2621628890557,53.6021494780025,71.5059327994666,0.5085370753095,3.25799761052228,2.5926644736038,3.5924609612035,33.5244536374965,13.2989883613929,55.3761070802621,5.09904411840566,12.8965965636713,23.8512400041998,32.9671538721954,29.2234049851345,1.02652102730598,7.75296524548339,47.7339734177595,22.7946242394516,51.3656428630522,71.4479071409209,21.7372795087739,16.4420007814209,23.6186265374967,25.5688367583653,23.3141601441111,27.2647563319481,32.7872630709804,9.26619167876382,17.7213635993397,30.9946712850986,31.1725417459185,17.2022758707021,27.2885466780657,15.3378115265217,10.6528448900898,5.37415754237058,5.15606999641603,2.85465333544967,12.4690884440031,8.89836321033075,19.9991019482939,5.37317290392747,6.54397267572229,4.99325275352352,10.606568295405,17.3581852209277,19.5758468751238,8.23824246228925,8.01523895945167,5.75117642156288,6.80133689952316,5.25679331640218,10.7952746919265,4.50262574941152,4.14706207840855,2.92425886013794,12.5218814834816,2.55437935295271,3.04644169735036,1.22061219961398,9.09243296012797,5.69275952325189,12.0648777568408,4.77715066438339,6.80047199927361,10.3018711554838,10.1024846629776,32.8080735394493,9.05313202914326,11.579845934246,6.00286871519987,1.13352962756136,5.78806185809585,5.87368090815522,2.50724377514082,4.94082315457555,3.0699766941019,1.06013487567529,1.54331230616732,4.73038833828603,2.04993214870357,1.38172136692479,5.1656192550155,32.7672493679602,10.9121772950058,18.6010776438708,13.4123623289792,21.6222500238632,7.6189601713653,8.66379705770371,47.5970002134733,7.68180453797814,18.4270028237073,10.7828031177699,20.803972378458,15.1069868337,14.3077769807584,6.52261293648624,5.9303646268175,6.13337173237996,5.24206263321667,27.157204792644,18.4940180488464,26.1504462586495,93.852346219505,15.5822131820175,82.2528000363072,1.60114149657094,16.2230934097715,3.3687002508852,13.42390804516,25.5053837386053,33.2038426838875,25.6395455300944,41.0876864841401,16.7360550963407,22.6065903884592,24.2708014440562,20.1202822927103,8.96569897442827,15.408002275821,13.4009772734392,19.0691047733584,31.0661966727045,15.913297769302,23.7664637583653,5.24433178629152,13.2857381909626,12.3096146406269,10.9727184731765,16.8555938287432,19.7885122931896,21.0891086625739,34.5166950156977,19.5954853499172,25.7078160238563,36.7332703794312,22.8257142059075,34.294892650126,10.6042814940864,15.5353532404703,9.75222794434589,13.3532432932059,11.3831095675649,19.7806285462685,7.25974121601409,18.3492170098038,12.6423703336907,18.8767860125377,2.12748913591143,5.22787588892725,21.7425867195924,13.1977095529442,33.3523874343409,46.5710947459843,1.51149313853035,8.5995303819669,12.0080594216783,1.10609528212909,3.48724276104376,7.99748052591865,25.6547636713681,16.1628608047169,12.2917303507644,55.9920326069414,30.97636983506,12.5431920774399,10.4812487853764,18.2056431582099,7.7896335304977,18.3021767541949,13.3775451456841,8.27730195303663,7.36126752114322,5.24247077423759,17.4805786040732,25.5630389072055,20.8766597640876,30.1140815696666,20.1187938577411,17.9055697645231,5.23248399421302,16.941912305844,9.12506288987062,24.0030921271011,36.5033767850578,36.7180061646648,23.5158648180761,28.6823536452069,20.9752126920447,34.7465986793453,25.5459904281294,21.5554421067534,12.4046793722106,42.8566665988132,38.0946117923841,3.7977639251473,28.2115222996939,14.4686897403434,4.01206833445841,74.4943116011448,37.6158012391723,26.5178228830185,6.1530909255342,20.8733874886108,31.4172497045072,17.9869125775236,13.0198256358363,24.9574839460966,9.95041092884715,6.68682051625918,11.0358227683332,2.91406552326305,8.77103935781043,4.00826107898341,3.76769088092864,11.0311317288645,21.824265086853,13.1302423776527,24.0459137443046,28.0303418785736,24.7351419005138,29.5199895015038,61.1011087048618,58.4743808666981,9.41907645677153,15.5935537781504,31.328164288524,23.7311255207688,39.014596323722,38.4580222713295,26.6089382006829,29.9394320891412,9.44277915887304,24.6540168977523,32.8222879887798,7.5453169769533,39.8889602085872,22.3701842854646,21.5654974507341,77.2277858055195,45.890424938754,5.12909587685173 | |||
|short_description=p1@HECA | |||
}} |
Revision as of 14:15, 22 January 2014
Short description: | p1@HECA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HECA_5end |
Coexpression cluster: | C838_Eosinophils_CD4_Neutrophils_CD8_CD14_Natural_CD19 |
Association with transcript: | 0bp_to_ENST00000367658, NM_016217, uc003qin.2_5end |
EntrezGene: | HECA |
HGNC: | 21041 |
UniProt: | Q9UBI9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.38e-30 | 98 |
blood island | 8.38e-30 | 98 |
hemolymphoid system | 1.38e-26 | 108 |
bone marrow | 3.67e-23 | 76 |
bone element | 1.99e-22 | 82 |
immune system | 2.20e-21 | 93 |
skeletal element | 2.33e-21 | 90 |
adult organism | 9.50e-20 | 114 |
skeletal system | 5.82e-19 | 100 |