FFCP PHASE1:Hg19::chr6:112418355..112418366,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1358 | |||
|description=CAGE_peak_at_chr6:112418355..112418366,+ | |||
|id=chr6:112418355..112418366,+ | |||
|ontology_enrichment_celltype=CL:0005020!1.20e-12!6;CL:0002138!1.20e-12!6;CL:0005022!1.20e-12!6;CL:0002144!1.57e-11!3;CL:0002616!3.88e-09!1;CL:0002553!4.19e-09!1;CL:0002139!3.73e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0002138;1.96e-30;6!CL:0002139;1.02e-13;24!CL:0002144;4.52e-08;3!CL:0000307;7.02e-08;3!CL:0002078;5.15e-07;45!CL:0000115;7.04e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.86e-30,6;CL:0002138,1.86e-30,6;CL:0005022,1.86e-30,6;CL:0002139,1.01e-13,24;CL:0000115,2.87e-09,36;CL:0002144,4.52e-08,3;CL:0000068,8.29e-08,3;CL:0000069,8.29e-08,3;CL:0000307,8.29e-08,3;CL:0000377,8.29e-08,3;CL:0002078,1.79e-07,45 | |||
|ontology_enrichment_development_v019=CL:0005022;1.96e-30;6!UBERON:0005425;5.71e-21;1!UBERON:0009117;6.41e-09;10!UBERON:0005564;6.41e-09;10!CL:0000377;7.02e-08;3!UBERON:0003056;7.02e-08;3 | |||
|ontology_enrichment_disease=DOID:0060085!6.22e-09!1;DOID:3165!6.22e-09!1;DOID:0060121!6.22e-09!1;DOID:2438!6.22e-09!1;DOID:4418!6.22e-09!1;DOID:5662!7.85e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001915!1.57e-11!3;UBERON:0001982!1.57e-11!3;UBERON:0001473!1.31e-09!8;UBERON:0004536!1.31e-09!8;UBERON:0006558!1.31e-09!8;UBERON:0000941!2.22e-09!1;UBERON:0004904!2.22e-09!1;UBERON:0002464!2.22e-09!1;UBERON:0001021!2.22e-09!1;UBERON:0001785!2.22e-09!1;UBERON:0002084!4.54e-09!1;UBERON:0002082!4.54e-09!1;UBERON:0004706!4.54e-09!1;UBERON:0002465!8.89e-08!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;4.94e-23;8!UBERON:0004536;4.94e-23;8!UBERON:0006558;4.94e-23;8!UBERON:0000941;5.71e-21;1!UBERON:0001785;5.71e-21;1!UBERON:0002464;5.71e-21;1!UBERON:0004904;5.71e-21;1!UBERON:0001021;5.71e-21;1!UBERON:0002465;1.40e-18;10!UBERON:0003714;3.52e-11;2!UBERON:0005162;3.52e-11;2!UBERON:0000122;3.52e-11;2!UBERON:0000473;6.44e-11;8!UBERON:0003135;3.43e-08;11!UBERON:0010523;4.52e-08;3!UBERON:0001915;4.52e-08;3!UBERON:0001982;4.52e-08;3!UBERON:0002405;2.80e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,4.76e-23,8;UBERON:0004536,4.76e-23,8;UBERON:0006558,4.76e-23,8;UBERON:0000941,3.45e-21,1;UBERON:0001785,3.45e-21,1;UBERON:0002464,3.45e-21,1;UBERON:0004904,3.45e-21,1;UBERON:0001021,3.45e-21,1;UBERON:0003902,3.45e-21,1;UBERON:0005425,3.45e-21,1;UBERON:0002465,1.36e-18,10;UBERON:0003714,2.73e-11,2;UBERON:0005162,2.73e-11,2;UBERON:0000122,2.73e-11,2;UBERON:0000473,5.98e-11,8;UBERON:0003135,3.25e-08,11;UBERON:0010523,4.52e-08,3;UBERON:0001915,4.52e-08,3;UBERON:0001982,4.52e-08,3 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.7670747486813,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,1.29929802984966,3.24089858803628,5.13686211033415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36401656792831,4.01946195234268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:112418355..112418366,+ | |||
}} |
Revision as of 13:26, 22 January 2014
Short description: | p@chr6:112418355..112418366, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:112418355..112418366, + |
Coexpression cluster: | C1358_Endothelial_gall_thyroid_throat_colon_Lymphatic_chorionic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.86e-30 | 6 |
endothelial cell of lymphatic vessel | 1.86e-30 | 6 |
vascular lymphangioblast | 1.86e-30 | 6 |
endothelial cell of vascular tree | 1.01e-13 | 24 |
endothelial cell | 2.87e-09 | 36 |
capillary endothelial cell | 4.52e-08 | 3 |
duct epithelial cell | 8.29e-08 | 3 |
branched duct epithelial cell | 8.29e-08 | 3 |
tracheal epithelial cell | 8.29e-08 | 3 |
tracheoblast | 8.29e-08 | 3 |
meso-epithelial cell | 1.79e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 4.76e-23 | 8 |
lymph vasculature | 4.76e-23 | 8 |
lymphatic part of lymphoid system | 4.76e-23 | 8 |
cranial nerve II | 3.45e-21 | 1 |
cranial nerve | 3.45e-21 | 1 |
nerve trunk | 3.45e-21 | 1 |
nerve connecting eye with brain | 3.45e-21 | 1 |
nerve | 3.45e-21 | 1 |
retinal neural layer | 3.45e-21 | 1 |
presumptive neural retina | 3.45e-21 | 1 |
lymphoid system | 1.36e-18 | 10 |
neural tissue | 2.73e-11 | 2 |
multi cell component structure | 2.73e-11 | 2 |
neuron projection bundle | 2.73e-11 | 2 |
testis | 5.98e-11 | 8 |
male reproductive organ | 3.25e-08 | 11 |
microcirculatory vessel | 4.52e-08 | 3 |
endothelium of capillary | 4.52e-08 | 3 |
capillary | 4.52e-08 | 3 |