FFCP PHASE1:Hg19::chr6:54711509..54711522,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222584 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21357 | |||
|TSSclassifier=strong | |||
|UniProt=Q5T0W9 | |||
|association_with_transcript=-46bp_to_ENST00000306858,NM_001010872,uc003pck.2_5end | |||
|coexpression_cluster_id=C4617 | |||
|description=CAGE_peak_2_at_FAM83B_5end | |||
|id=chr6:54711509..54711522,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.74e-33!254;CL:0002076!5.48e-23!43;CL:0000223!3.76e-17!59;CL:0002251!6.39e-15!21;CL:0002159!1.68e-09!13;CL:0002368!5.98e-09!13;CL:0000039!6.01e-07!7;CL:0000586!6.01e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.03e-21;42!CL:0002251;1.11e-18;20!CL:0002368;1.47e-10;13!CL:0002159;4.26e-10;14!CL:0000622;2.15e-09;5!CL:0000154;9.35e-08;6!CL:0002621;1.13e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,5.18e-27,42;CL:0000066,8.16e-23,253;CL:0000223,6.59e-21,58;CL:0002251,4.13e-19,20;CL:0002368,1.31e-10,13;CL:0002159,5.17e-10,14;CL:0000622,1.23e-09,5;CL:0000154,5.94e-08,6;CL:0002621,1.12e-07,3;CL:0000076,1.14e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000223;1.31e-10;58 | |||
|ontology_enrichment_disease=DOID:305!4.89e-27!106;DOID:0050687!2.29e-18!143;DOID:1749!2.10e-13!14;DOID:299!1.07e-10!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.70e-19;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.11e-19,14;DOID:305,1.62e-10,106;DOID:0050687,1.63e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.28e-27!169;UBERON:0000925!7.28e-27!169;UBERON:0006595!7.28e-27!169;UBERON:0001007!6.08e-21!155;UBERON:0001555!6.08e-21!155;UBERON:0007026!6.08e-21!155;UBERON:0001004!1.91e-17!72;UBERON:0004921!1.28e-16!129;UBERON:0004185!1.28e-16!129;UBERON:0000077!1.39e-15!130;UBERON:0000065!9.81e-14!53;UBERON:0000161!1.01e-10!35;UBERON:0000072!3.38e-10!46;UBERON:0001041!3.38e-10!98;UBERON:0008947!3.51e-09!38;UBERON:0003258!3.51e-09!38;UBERON:0000166!1.34e-08!21;UBERON:0000464!3.28e-08!104;UBERON:0000344!3.39e-08!12;UBERON:0005631!8.68e-08!14;UBERON:0000158!8.68e-08!14;UBERON:0005911!1.69e-07!82;UBERON:0001557!4.94e-07!19;UBERON:0000062!5.98e-07!511;UBERON:0005153!7.74e-07!37;UBERON:0003729!9.25e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;1.93e-10;28!UBERON:0000161;2.19e-10;19!UBERON:0000166;2.19e-10;19!UBERON:0003729;2.75e-09;13!UBERON:0000344;1.97e-08;20!UBERON:0003343;2.11e-08;4!UBERON:0004785;2.11e-08;4!UBERON:0001555;3.01e-08;54!UBERON:0001949;1.13e-07;3!UBERON:0004921;5.42e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.11e-15,160;UBERON:0000925,7.11e-15,160;UBERON:0006595,7.11e-15,160;UBERON:0000166,2.83e-12,22;UBERON:0000161,1.61e-11,36;UBERON:0001007,1.78e-10,145;UBERON:0001555,1.78e-10,145;UBERON:0007026,1.78e-10,145;UBERON:0000165,4.06e-10,29;UBERON:0000930,4.06e-10,29;UBERON:0001004,1.02e-09,74;UBERON:0003729,2.70e-09,13;UBERON:0003102,7.05e-09,99;UBERON:0000344,1.81e-08,20;UBERON:0003343,2.20e-08,4;UBERON:0004785,2.20e-08,4;UBERON:0001949,1.12e-07,3;UBERON:0005631,1.13e-07,14;UBERON:0000158,1.13e-07,14;UBERON:0000033,7.88e-07,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,1.8072355126695,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0.728590576585084,2.59549109949101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.73043412653187,8.45512973831587,9.46455164783713,0.243947412259191,0.132529768321485,0.464775771478074,0.414644220061482,1.00928340350251,0.36497735907583,0,0,0,0,0,0.591534000199219,0.337169380156203,0.964044119533928,0.661763836394364,0.653638332277218,0.474541238222193,0.539325232640658,0.98110732562673,0,0,0,0,0,0,0,0,0,0.983907508344908,0,14.7065382447558,1.1240175325762,4.42327478611176,4.53683381276795,0,0,0,0,0,0,0,0,9.4824527755113,4.29243081047436,0,0,0,2.81201501960331,3.19166043577833,3.96970272278682,4.65704318054811,6.1033127087932,2.30029607499127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,1.45031339509947,5.81468763879526,3.86740153530765,0,0,0,0.451199612907412,0.616122696835318,0,0,1.05551628892876,0,0,0,0,0,0,1.52925763827023,1.66215201785745,0.223874754722178,0,0,0,0,0,1.44257416306811,0,0,4.01985876597321,3.25030123018261,0,0,0,0,0,0,0,0,0,7.76839102196597,4.03599141466723,6.63586104971837,5.36136238534415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50177493086331,1.34060455107157,1.08890984861323,0.941438007767792,0.43050537267123,0,1.7737206141467,1.37834040124176,0,0,0,0,0,0,0,0,0,0,5.3908847515827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55567026775618,0,0,0,0,4.29740072527842,3.56357616999166,3.99308912729002,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0.808815160325942,2.86433879480975,0,0.789147245095469,0,0,0,0,0,5.20855522170466,0.787139999965761,0,2.04828206913899,0.254253650292766,3.54581522651905,0,0,0,0,0,0,0,0,0,0,7.11061095820877,1.23120413606075,0,3.68902247020896,1.70539524378567,1.73835795075213,1.5950057986596,2.56473261525214,5.33034776018635,0,0,0,0,0,0,0,0,0.843992258112108,0.816164040795739,2.68570835724488,0,0,1.59223616106011,2.4441205797345,0,0,0,0,0,0,0,9.97889556553658,0,0,4.83962864194656,0,0,1.35291077473043,1.03688191397247,0,0.330991955875499,0,0,0.853828638089378,0,0,7.64340699832146,4.26590112243973,0.17472666824203,0,0.483781656445426,0.877071805034227,0.739039113478883,4.26751672549045,0,0.451961481561065,0,0.19871461170299,0,2.34661659281764,1.52301758477914,0.640358984218058,0.39961921916426,3.60226042885265,0,0,0,1.49103042678519,7.07082103850386,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,4.3929380109778,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0.964518890790115,0.275078873194468,0,1.1248694577575,25.5354645004123,0,4.36065093879046,1.02447419488958,1.20645552710496,0.211200673038813,0,7.48469269545837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.213574825135389,0.157204305099666,0,0,0,0,8.93677760878255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,1.23520578864389,0,0,0,0,0,0,0.303859956177382,0,0,0,0.163565394255844,0,0.245772908753719,0.211312123358627,0,0,0,0,0,4.33626473930278,7.46492712039567,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4351701475359,3.18518253038899,10.0885729186923,1.61735932610474,0,0,0,0,0,0.781514011233092,10.4762677792569,0,0.295712172434091,0,0,0,0,0,0,0.496211178389294,0,1.78867398695433,0,0,0,0,3.193285325855,0,0,0,0,0.354581522651905,0,0.941917114206168,0,2.80272163313789,0.913158720509496,0,0,0,0,0,0,0,1.86494547746733,1.87790324803345,2.76503864725637,0,0.236664001461131,0.426067023795788,0,0.4582137370881,0,0,4.80978356730507,1.76670420507437,0.853425474875886,0.647428837187895,0.102662806856247,0,5.34282092365053,0,0,0,0.11294608203896,0,0,2.46957305945423,1.31135736302374,0,0.245148321753905,0,0,0,0,0,0,0,0,11.6060060093677,3.52894871715692,0.0802413666891683,0,1.83491713361816,0,0,0,0,1.5870805215462,0,0,0,0,0.109265571963696,0.253397002022874,1.52983244612973,0.26721740526556,0.36757959813938,1.50424523575425,0.151557396436479,0,0,0,0.213233981900981,0.952257725854961,0.258355639344024,0.869046000142011,1.12131862580613,0.954707374172474,0.606351566874658,2.8303177226605,1.02669990325584,0.942928742204225,1.64961072403156,0.665320713092027,2.93051766999508,0.106727345877715,0,0.359300808426348,0,0.244482888365733,0.813792356631477,0.665756774185513,0,0 | |||
|short_description=p2@FAM83B | |||
}} |
Revision as of 12:22, 22 January 2014
Short description: | p2@FAM83B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FAM83B_5end |
Coexpression cluster: | C4617_immature_malignant_squamous_oral_amniotic_Keratinocyte_epidermoid |
Association with transcript: | -46bp_to_ENST00000306858, NM_001010872, uc003pck.2_5end |
EntrezGene: | FAM83B |
HGNC: | 21357 |
UniProt: | Q5T0W9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 5.18e-27 | 42 |
epithelial cell | 8.16e-23 | 253 |
endodermal cell | 6.59e-21 | 58 |
epithelial cell of alimentary canal | 4.13e-19 | 20 |
respiratory epithelial cell | 1.31e-10 | 13 |
general ecto-epithelial cell | 5.17e-10 | 14 |
acinar cell | 1.23e-09 | 5 |
protein secreting cell | 5.94e-08 | 6 |
gingival epithelial cell | 1.12e-07 | 3 |
squamous epithelial cell | 1.14e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 7.11e-15 | 160 |
endoderm | 7.11e-15 | 160 |
presumptive endoderm | 7.11e-15 | 160 |
oral opening | 2.83e-12 | 22 |
orifice | 1.61e-11 | 36 |
digestive system | 1.78e-10 | 145 |
digestive tract | 1.78e-10 | 145 |
primitive gut | 1.78e-10 | 145 |
mouth | 4.06e-10 | 29 |
stomodeum | 4.06e-10 | 29 |
respiratory system | 1.02e-09 | 74 |
mouth mucosa | 2.70e-09 | 13 |
surface structure | 7.05e-09 | 99 |
mucosa | 1.81e-08 | 20 |
mucosa of oral region | 2.20e-08 | 4 |
respiratory system mucosa | 2.20e-08 | 4 |
gingival epithelium | 1.12e-07 | 3 |
extraembryonic membrane | 1.13e-07 | 14 |
membranous layer | 1.13e-07 | 14 |
head | 7.88e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.11e-19 | 14 |
carcinoma | 1.62e-10 | 106 |
cell type cancer | 1.63e-07 | 143 |