FFCP PHASE1:Hg19::chr6:52441810..52441865,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9697 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16855 | |||
|TSSclassifier=strong | |||
|UniProt=Q15035 | |||
|association_with_transcript=0bp_to_NM_012288,uc003paq.2_5end | |||
|coexpression_cluster_id=C4613 | |||
|description=CAGE_peak_1_at_TRAM2_5end | |||
|id=chr6:52441810..52441865,- | |||
|ontology_enrichment_celltype=CL:0000055!3.91e-44!180;CL:0000057!7.78e-27!75;CL:0000222!5.49e-20!119;CL:0000144!5.17e-19!625;CL:0000548!3.45e-18!679;CL:0000004!3.45e-18!679;CL:0000255!3.45e-18!679;CL:0002371!1.39e-17!591;CL:0000012!1.51e-17!682;CL:0000220!3.26e-16!246;CL:0002321!9.12e-16!248;CL:0000183!1.23e-13!59;CL:0000680!1.65e-13!57;CL:0000056!1.65e-13!57;CL:0000355!1.65e-13!57;CL:0000187!4.21e-12!54;CL:0002620!5.46e-12!23;CL:0000192!6.02e-10!42;CL:0000514!6.02e-10!42;CL:0000393!3.37e-09!60;CL:0000211!3.37e-09!60;CL:0000003!9.34e-08!722;CL:0000048!9.66e-08!430;CL:0000359!3.52e-07!32;CL:0000213!4.30e-07!57;CL:0000215!4.30e-07!57;CL:0000723!7.03e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.45e-12;23!CL:0000057;1.88e-11;73!CL:0002320;9.90e-09;188!CL:0000134;7.43e-08;55!CL:0000192;8.75e-08;43!CL:0000187;1.82e-07;55!CL:0000359;6.98e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.70e-27,76;CL:0000222,1.15e-20,121;CL:0002321,2.53e-16,250;CL:0000680,5.18e-14,58;CL:0000056,5.18e-14,58;CL:0000355,5.18e-14,58;CL:0000187,1.36e-12,55;CL:0002620,5.45e-12,23;CL:0000192,1.95e-10,43;CL:0000514,1.95e-10,43;CL:0000393,1.25e-09,61;CL:0000211,1.25e-09,61;CL:0000048,4.77e-08,427;CL:0000213,3.01e-07,58;CL:0000215,3.01e-07,58;CL:0000359,3.51e-07,32;CL:0000723,3.65e-07,433;CL:0002078,7.83e-07,45 | |||
|ontology_enrichment_development_v019=CL:0000355;6.29e-08;58!CL:0000514;8.75e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!9.04e-19!143;UBERON:0000914!1.71e-18!83;UBERON:0002329!1.71e-18!83;UBERON:0003077!1.71e-18!83;UBERON:0003059!1.71e-18!83;UBERON:0007282!1.71e-18!83;UBERON:0009618!1.71e-18!83;UBERON:0007285!1.71e-18!83;UBERON:0004290!2.86e-16!70;UBERON:0002049!8.37e-16!79;UBERON:0007798!8.37e-16!79;UBERON:0000490!1.49e-15!138;UBERON:0000486!3.90e-15!82;UBERON:0002100!6.48e-15!216;UBERON:0003914!2.22e-14!118;UBERON:0004872!1.21e-13!84;UBERON:0000055!2.10e-12!69;UBERON:0001134!4.06e-12!61;UBERON:0002036!4.06e-12!61;UBERON:0003082!4.06e-12!61;UBERON:0002385!5.06e-12!63;UBERON:0001015!5.06e-12!63;UBERON:0000383!5.06e-12!63;UBERON:0004535!2.94e-11!110;UBERON:0001009!5.11e-11!113;UBERON:0001981!1.57e-10!60;UBERON:0007500!1.57e-10!60;UBERON:0004537!1.57e-10!60;UBERON:0006965!1.57e-10!60;UBERON:0003104!4.41e-10!238;UBERON:0009142!4.41e-10!238;UBERON:0002199!4.10e-09!45;UBERON:0002416!4.10e-09!45;UBERON:0004923!5.72e-09!57;UBERON:0001637!7.65e-09!42;UBERON:0003509!7.65e-09!42;UBERON:0004572!7.65e-09!42;UBERON:0003102!8.45e-09!95;UBERON:0002097!4.51e-08!40;UBERON:0000475!5.14e-08!365;UBERON:0004573!2.72e-07!33;UBERON:0004571!2.72e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;8.67e-09;198!UBERON:0001434;3.71e-07;36!UBERON:0001637;4.65e-07;42!UBERON:0003509;4.65e-07;42!UBERON:0004572;4.65e-07;42!UBERON:0002049;6.44e-07;75!UBERON:0007798;6.44e-07;75!UBERON:0002097;7.63e-07;41!UBERON:0002204;9.48e-07;70!UBERON:0004573;9.83e-07;33!UBERON:0004571;9.83e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,8.85e-20,148;UBERON:0003104,2.83e-18,160;UBERON:0009142,2.83e-18,160;UBERON:0007503,1.29e-17,78;UBERON:0005256,1.86e-17,122;UBERON:0002329,8.82e-17,71;UBERON:0003059,8.82e-17,71;UBERON:0007282,8.82e-17,71;UBERON:0004290,8.82e-17,71;UBERON:0009618,8.82e-17,71;UBERON:0007524,2.29e-16,73;UBERON:0003077,5.58e-16,72;UBERON:0007285,5.58e-16,72;UBERON:0000486,1.29e-15,83;UBERON:0002049,2.91e-15,78;UBERON:0007798,2.91e-15,78;UBERON:0003914,5.91e-14,117;UBERON:0002100,3.69e-13,199;UBERON:0004872,3.84e-13,83;UBERON:0001134,1.36e-12,62;UBERON:0002036,1.36e-12,62;UBERON:0003082,1.36e-12,62;UBERON:0002385,1.71e-12,64;UBERON:0001015,1.71e-12,64;UBERON:0000383,1.71e-12,64;UBERON:0000055,6.81e-12,68;UBERON:0004535,7.42e-11,109;UBERON:0001009,1.27e-10,112;UBERON:0007500,4.93e-10,59;UBERON:0001981,4.93e-10,59;UBERON:0004537,4.93e-10,59;UBERON:0006965,4.93e-10,59;UBERON:0004923,1.05e-09,66;UBERON:0002199,1.51e-09,46;UBERON:0002416,1.51e-09,46;UBERON:0001637,7.65e-09,42;UBERON:0003509,7.65e-09,42;UBERON:0004572,7.65e-09,42;UBERON:0003102,1.50e-08,99;UBERON:0002097,1.69e-08,41;UBERON:0004573,2.72e-07,33;UBERON:0004571,2.72e-07,33 | |||
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| |||
|short_description=p1@TRAM2 | |||
}} |
Revision as of 12:18, 22 January 2014
Short description: | p1@TRAM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRAM2_5end |
Coexpression cluster: | C4613_pleomorphic_Fibroblast_mesodermal_Nucleus_Smooth_thyroid_hepatic |
Association with transcript: | 0bp_to_NM_012288, uc003paq.2_5end |
EntrezGene: | TRAM2 |
HGNC: | 16855 |
UniProt: | Q15035 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.70e-27 | 76 |
mesodermal cell | 1.15e-20 | 121 |
embryonic cell | 2.53e-16 | 250 |
muscle precursor cell | 5.18e-14 | 58 |
myoblast | 5.18e-14 | 58 |
multi-potent skeletal muscle stem cell | 5.18e-14 | 58 |
muscle cell | 1.36e-12 | 55 |
skin fibroblast | 5.45e-12 | 23 |
smooth muscle cell | 1.95e-10 | 43 |
smooth muscle myoblast | 1.95e-10 | 43 |
electrically responsive cell | 1.25e-09 | 61 |
electrically active cell | 1.25e-09 | 61 |
multi fate stem cell | 4.77e-08 | 427 |
lining cell | 3.01e-07 | 58 |
barrier cell | 3.01e-07 | 58 |
vascular associated smooth muscle cell | 3.51e-07 | 32 |
somatic stem cell | 3.65e-07 | 433 |
meso-epithelial cell | 7.83e-07 | 45 |