FFCP PHASE1:Hg19::chr6:45390077..45390105,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=860 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10472 | |||
|TSSclassifier=weak | |||
|UniProt=Q13950,F8W8U5 | |||
|association_with_transcript=163bp_to_ENST00000359524,ENST00000371432,NM_004348,uc003oxt.2_5end | |||
|coexpression_cluster_id=C4607 | |||
|description=CAGE_peak_9_at_RUNX2_5end | |||
|id=chr6:45390077..45390105,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.27e-09!180;CL:0000057!1.02e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000243;3.60e-07;15!CL:0000125;3.60e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,4.03e-07,15;CL:0000125,4.03e-07,15;CL:0000030,4.03e-07,15;CL:0000339,4.03e-07,15;CL:0000188,4.69e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000339;3.60e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006876;3.04e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006876,3.50e-08,11 | |||
|phase1_expression=0.363356758541113,1.92690471501885,0.281908808191942,0,0.446961094427288,0,0,0.631719873426831,0.261185628199839,1.22866968250754,1.39560233594486,1.31064823278103,0,0.74259811776028,0.994192127183747,0,0,0.730310090387373,1.46379839637152,6.27917396191618,5.71201935483908,2.82109249330279,1.14494394852423,1.91624195102038,1.25542639594803,0,0,0,0.393364276848904,0,0.464448369948228,0.919421224478927,0,0,0,0,0.587200878669695,0,1.00272223735071,0,0.223915474239924,0,0.257575567634187,0.436194716338694,1.13362783106643,1.69808842831471,0.464858073811369,0,0.619412741790207,0,1.0246428261164,0.236482229888585,0.689491361473237,2.5819387343353,0,1.12945403725563,0.545812300115692,0.224723484445085,0,1.28371610830437,0,0.329851300186716,0.398927315243264,0.852449501065388,0.580418477257168,1.70215567407342,1.24564449799115,0,0,0.434377689410233,1.81619850790011,0.736555271975129,1.89877432464531,0,0,0,0.22465726229299,0.150176892841506,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58030450865046,0,0,0.205601498999509,0,0,0,0,0.668462741311041,0,0,0.541607727530031,0.512365278902701,1.04047478047903,0.164437904603676,0,0.289803085735052,0,0,0,0.906474741580529,0,0.34362744548263,0.253019692019503,0,0,0,0.301150238155546,0.255973222308837,0,0.236777252044017,0,0.403213486449465,0.267440195783507,0.144824403882799,2.43806866313962,0,0,0,0,0.144846518960824,0,0,5.76662384700814,6.20842312895179,8.7834785693126,0.130979075497713,0,0,0.324547393654683,0.174129737299267,0.26591592103773,6.43924685624423,6.29194401858141,8.17206502925043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,2.1185468930115,1.72101972449288,1.06400514659507,0.560677600142307,0,0.24666754841716,0,0.808264032418128,0.326923806226917,2.57307626996383,1.15235184896,1.64025002283658,0.312160076830321,0,0.747243402759005,3.28816596202542,2.91371299862637,3.79217178096071,1.42907919878425,1.35117749042945,2.47981874821837,1.18800285728205,2.47266929278557,0.910161361938026,10.0606539854273,1.34668891163253,2.87772595705518,0.554128230968366,5.70670907145089,2.45190236639216,1.05166641234618,0.113432183160021,1.97328599257748,1.06778694409284,1.48352330811693,0.900273288253207,0.92747276314595,1.28820270022815,1.30281799432113,2.53164498361899,1.36411807225678,2.01947019395292,1.28869858099219,0.969876340912871,0.710019185033229,0.503760491138201,0.508681776931463,0.193260853163297,0,0.286804595389004,0,0,0,0.10366105501537,0,0,1.56449532329816,1.92972281457866,1.38134921352481,1.39310378409594,2.16563844500876,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,1.20097467208968,0,0,0,0.185176890317059,1.3032332212413,0,2.88662684050547,1.73895607462615,2.81780866165972,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0.16798212819886,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0,1.24396869324463,6.77363781059719,1.8936365013957,0.253991577168676,0,0,0,0.102827492703324,0,0,4.26098120512371,1.74384027533312,3.5202377194056,1.03417372606222,0,0,1.86156681609409,0,1.54324424557285,0,1.8649552531127,0.714889968290738,0.542621605391443,1.64648067356154,0.325736184293735,0.355391948742546,1.58390374586686,0,0,0.199945982364114,0,0,0,0.479249710983165,0,0,0.868687840005475,1.02738161275192,3.22309733831812,0.112085143993527,0.394061520403854,0,0.256686072559497,0.508189248444927,1.30139853857622,0.773288812777695,0.167516265334349,0,0.749007023947182,0,2.48649308061621,0.736148950314839,1.50051156317903,0.813795071099207,1.24782516918484,3.56857977594324,2.05013139544115,2.6942525448324,0.902838299183157,0,1.03473071292505,5.31380478828349,0.553107505625109,0.60818530127658,2.34961388955289,2.05886054286514,0.206768026122887,0.862856803274467,0.426910231213777,0,0,0.907170879989041,0.496215615637554,1.38115775959256,0.280660094433074,0.256278298511402,0.511707249066704,0.321707842287215,0,2.15893571323718,0.355123450626254,1.39616165223476,0.519254429183621,1.39452454151951,0,1.60405176242628,0.184161977871793,1.60740227430449,2.36718518408732,0.262248829918848,0.451199612907412,0.308061348417659,3.13739907670742,0,0.316654886678627,0,0,2.37507507712353,0,2.16757150035082,2.50844886927427,0.509752546090077,0,2.0148727924996,0,0,0,0,0,0.103041011647722,4.67004270573551,4.53802249563234,0,0,0,3.77015801339276,1.54048617114644,1.99554777143968,5.23778975441216,4.61907052933577,4.20548412351263,2.72725207731523,2.75999310504886,0.165284915360978,0.768760269460425,0.765676274967505,0.30347334256665,0,0.31481234683064,2.7881490806424,0,0,0.869932992075073,0.18532421910392,0,4.46590043231601,3.16379424718726,1.90630193923825,0.767693373934002,0,0,0,2.33834194858309,3.29444435683266,1.7671860351853,0.202182481573316,0,0,1.95053495635836,0.487426979262569,0,2.8664981395677,1.1312434556297,0,0,0,0,1.15755106853338,0.655894752046633,0,0.30982349809975,0.563391205064483,2.58140433967293,1.96498082026242,0,0,0,0,0,2.79947776195986,0.192444225451024,2.01090682660736,0,0.188287601553558,1.7220214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| |||
|short_description=p9@RUNX2 | |||
}} |
Revision as of 12:08, 22 January 2014
Short description: | p9@RUNX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RUNX2_5end |
Coexpression cluster: | C4607_gall_pagetoid_alveolar_biphenotypic_Dendritic_myxofibrosarcoma_osteosarcoma |
Association with transcript: | 163bp_to_ENST00000359524, ENST00000371432, NM_004348, uc003oxt.2_5end |
EntrezGene: | RUNX2 |
HGNC: | 10472 |
UniProt: | Q13950F8W8U5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 4.03e-07 | 15 |
glial cell | 4.03e-07 | 15 |
glioblast | 4.03e-07 | 15 |
glioblast (sensu Vertebrata) | 4.03e-07 | 15 |
cell of skeletal muscle | 4.69e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
vasculature of organ | 3.50e-08 | 11 |