FFCP PHASE1:Hg19::chr6:31895480..31895530,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=717 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1248 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N6L6,E7ETN3,F8WCJ9 | |||
|association_with_transcript=0bp_to_ENST00000418949,ENST00000477310,ENST00000482060_5end | |||
|coexpression_cluster_id=C2173 | |||
|description=CAGE_peak_1_at_C2_5end | |||
|id=chr6:31895480..31895530,+ | |||
|ontology_enrichment_celltype=CL:0002194!1.71e-24!63;CL:0000576!1.71e-24!63;CL:0000040!1.71e-24!63;CL:0000559!1.71e-24!63;CL:0000839!6.44e-23!70;CL:0002009!9.86e-23!65;CL:0000557!4.04e-22!71;CL:0000766!2.47e-21!76;CL:0002057!2.72e-21!42;CL:0000860!3.07e-18!45;CL:0000763!7.83e-09!112;CL:0000049!7.83e-09!112 | |||
|ontology_enrichment_celltype_v019=CL:0000473;6.21e-20;39!CL:0000234;6.21e-20;39!CL:0000860;6.69e-19;33!CL:0002057;6.69e-19;33!CL:0000576;3.92e-17;48!CL:0000766;1.23e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.32e-30,59;CL:0000576,2.32e-30,59;CL:0000040,2.32e-30,59;CL:0000559,2.32e-30,59;CL:0000473,3.00e-30,48;CL:0000234,3.00e-30,48;CL:0002009,1.51e-28,61;CL:0000839,5.80e-28,66;CL:0000557,3.66e-27,67;CL:0000766,7.02e-26,72;CL:0000860,2.84e-25,42;CL:0002057,2.84e-25,42;CL:0000763,1.67e-11,108;CL:0000049,1.67e-11,108;CL:0002087,6.85e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;2.00e-18;42!UBERON:0004161;6.27e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.05e-29!115;UBERON:0002405!2.99e-26!115;UBERON:0002371!3.85e-21!80;UBERON:0002390!6.95e-20!102;UBERON:0003061!6.95e-20!102;UBERON:0002193!1.39e-19!112;UBERON:0001474!2.67e-17!86;UBERON:0000062!2.77e-16!511;UBERON:0004765!1.29e-15!101;UBERON:0001434!1.29e-15!101;UBERON:0000480!2.80e-11!626;UBERON:0000467!3.31e-11!625;UBERON:0002204!3.46e-11!167;UBERON:0000468!3.97e-10!659;UBERON:0001049!2.71e-09!57;UBERON:0005068!2.71e-09!57;UBERON:0006241!2.71e-09!57;UBERON:0007135!2.71e-09!57;UBERON:0002616!1.54e-08!59;UBERON:0000922!2.27e-08!612;UBERON:0002050!5.04e-08!605;UBERON:0005423!5.04e-08!605;UBERON:0000923!5.40e-08!604;UBERON:0005291!5.40e-08!604;UBERON:0006598!5.40e-08!604;UBERON:0002532!5.40e-08!604;UBERON:0003080!1.41e-07!42;UBERON:0002780!4.00e-07!41;UBERON:0001890!4.00e-07!41;UBERON:0006240!4.00e-07!41;UBERON:0000955!6.12e-07!69;UBERON:0006238!6.12e-07!69;UBERON:0002107!7.34e-07!19;UBERON:0006925!7.34e-07!19;UBERON:0008836!7.34e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.73e-08;114!UBERON:0002107;2.63e-07;19!UBERON:0006925;2.63e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.07e-31,114;UBERON:0002371,3.49e-26,76;UBERON:0002405,1.55e-24,93;UBERON:0002390,4.90e-24,98;UBERON:0003061,4.90e-24,98;UBERON:0002193,1.46e-22,108;UBERON:0001474,2.46e-22,82;UBERON:0004765,3.31e-19,90;UBERON:0001434,9.22e-19,100;UBERON:0000923,3.75e-12,560;UBERON:0010316,3.75e-12,560;UBERON:0005291,3.75e-12,560;UBERON:0006598,3.75e-12,560;UBERON:0010317,3.75e-12,560;UBERON:0002532,3.75e-12,560;UBERON:0002050,1.41e-11,564;UBERON:0005423,9.33e-11,581;UBERON:0002204,1.10e-10,167;UBERON:0000922,2.89e-10,592;UBERON:0003081,5.96e-09,203;UBERON:0001049,1.56e-08,56;UBERON:0005068,1.56e-08,56;UBERON:0006241,1.56e-08,56;UBERON:0007135,1.56e-08,56;UBERON:0000926,9.82e-08,315;UBERON:0004120,9.82e-08,315;UBERON:0006603,9.82e-08,315;UBERON:0002780,1.61e-07,41;UBERON:0001890,1.61e-07,41;UBERON:0003080,1.61e-07,41;UBERON:0006240,1.61e-07,41;UBERON:0002107,2.10e-07,19;UBERON:0006925,2.10e-07,19;UBERON:0008836,2.10e-07,19;UBERON:0000073,2.28e-07,53;UBERON:0002616,2.28e-07,53;UBERON:0000479,4.47e-07,773;UBERON:0011216,4.73e-07,223;UBERON:0009854,8.90e-07,23 | |||
|phase1_expression=0.363356758541113,2.35510576280081,2.25527046553554,0,3.5756887554183,1.74467704820074,2.53299878168311,0.631719873426831,3.65659879479774,0,0,0,0,0.618831764800233,0.662794751455832,1.34465029290355,0,0,0,0.246242116153576,0,0.626909442956176,0,0,0.125542639594803,0,0,0.0787107813136792,5.11373559903575,0.767658796194425,7.27635779585557,0,0,0,0,0,0.293600439334847,10.5259127621057,5.21415563422368,3.47217393145363,502.46632419439,318.711367362676,431.696651354897,7.70610665531693,7.935394817465,7.5201058968223,9.52959051313307,7.40102198439286,8.981484755958,35.0984718633024,26.6407134790265,20.8104362301955,8.27389633767885,9.03678557017357,9.47985406160392,11.2945403725563,10.9162460023138,6.74170453335254,11.3251040177234,8.66508373105453,13.4260796417799,26.717955315124,27.1270574365419,34.9504295436809,15.9615081245721,11.9150897185139,10.5879782329248,20.8536392163097,24.5096971657495,23.6735840728577,16.9511860737343,6.99727508376373,5.06339819905415,5.91514801673437,11.9058407980424,9.01532175686016,2.47122988522289,4.6554836780867,2.25015821375912,4.27519115611873,11.7360839547463,9.49853599576097,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0.710331756132051,0,0,0,0,19.5045493051169,1.34140171940727,0.255725123687061,7.22878304769133,1.50401373190767,6.51809335323707,0.795285947051099,12.1658717575659,0.283604451492204,0,0.175669571386252,21.7425265326203,0,0,31.805644578159,42.1393964264227,33.2394901297163,0.238490624305342,1.71598473234038,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.264818361626438,3.44203944898576,0,2.80338800071154,0,0,2.17847724779836,0.134710672069688,0.490385709340376,2.11900398702904,0.576175924479999,0,0.936480230490962,0.570471821544449,0.149448680551801,0,0,0,1.02077085627447,0,1.65321249881225,8.31602000097437,6.67620709052104,0.910161361938026,2.87447256726495,0,0,0.554128230968366,1.31693286264251,1.5324389789951,9.6152357700222,0,0.179389635688862,0.427114777637135,2.11931901159562,2.40072876867522,0.92747276314595,0.257640540045629,0.37223371266318,0.168776332241266,0.0974370051611986,0,0.644349290496095,2.58633690910099,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0.348581828608555,0.414644220061482,1.26160425437814,0,0,1.28648187638577,0,0,0.721879481669586,0.236613600079688,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,4.5273141246454,7.3504355692771,438.572420483535,350.869316353912,324.934448674772,0,24.5976877086227,0,0,0,0,0,0,0,0,1.04337364477569,0,0.866198686566443,1.38895653772983,0.761016608938393,0,0,106.119529623668,18.720341211139,38.6441021950693,0,0,0,0,0,0,1.47798971368783,1.05658120815871,0.829312462163088,1.29707958075265,2.5248486685276,1.0159663086747,3.4378958300245,0,0,0.411309970813294,24.6281307432012,0,0,0.87192013766656,0,0.517086863031111,0,0.845302752556,1.32969058292435,1.04007436911366,0,0,0,0.428933980974443,1.08524321078289,0,0,1.77695974371273,0,9.64606006590676,1.74306691720059,2.29937879718731,107.028926964248,104.971732109314,105.416969741516,0,0,0,0.289562613335158,0.205476322550383,0.716243852959582,0,0.394061520403854,0,0.128343036279748,0,0,0,2.34522771468088,0,0,0,0,1.2269149171914,1.00034104211935,0,6.65506756898583,1.07057393278297,0.473107245101804,3.74852527976682,0.601892199455438,0,0,0,0,0.521301686808497,5.09083009403126,5.83343820478455,0.82707210449155,1.2942852049117,1.28073069364133,0.303127571446259,0,0.30239029332968,0.496215615637554,0,0,2.69092213436972,0,0.64341568457443,0,0,0.355123450626254,0.410635780069046,0,0.348631135379878,2.05461064305758,0,0,5.28146461557191,1.27463817604702,4.19598127870157,0,0,0,1.46139224653261,0,0,0,0,0,0.270946437543853,1.00337954770971,0,0.831076008928724,0,0,0,0,0,0,117.981958336642,0,0,0,0,3.21367859688319,1.7400729292582,0.308097234229289,0.767518373630648,0.137836572484531,0.429680979473094,0.145016693914229,0.596586391912706,1.51354460599453,0,0,0.127612712494584,0,0.929691098594572,0.94443704049192,0,1.54016790088044,0,0,0,0,1.86079184679834,0.632758849437452,1.14378116354295,0.767693373934002,0.855877976067841,0,0,2.33834194858309,3.0199073270966,0.589062011728432,0,0,0,1.46290121726877,2.19342140668156,0,0.545999645631943,0.848432591722276,1.13008116620243,0,0,0.876901770507525,1.15755106853338,1.31178950409327,0,1.8589409885985,0,0,0.0982490410131212,0,0,13.9331039296458,24.6971169719926,0,0.349934720244983,0,0.670302275535787,0,109.206808901064,0,0,0,0,1.01489521846434,1.52927441428475,0,0.952927101831156,0.411362273086194,3.8908398671563,3.24018862342869,2.37937552888281,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,12.7753871307098,0,0.921722292925374,2.23676107892416,0.166849141711909,0.781552381608161,0,0,0.270455678475983,0,14.098700508785,3.36852972734796,30.473701288554,0,0.222886768554957,0,7.40107902686839,0.296964680832639,0,3.97659059106519,2.9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| |||
|short_description=p1@C2 | |||
}} |
Revision as of 11:10, 22 January 2014
Short description: | p1@C2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C2_5end |
Coexpression cluster: | C2173_CD14_Hepatocyte_liver_Monocytederived_Macrophage_myeloma_lung |
Association with transcript: | 0bp_to_ENST00000418949, ENST00000477310, ENST00000482060_5end |
EntrezGene: | C2 |
HGNC: | 1248 |
UniProt: | Q8N6L6E7ETN3F8WCJ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.32e-30 | 59 |
monocyte | 2.32e-30 | 59 |
monoblast | 2.32e-30 | 59 |
promonocyte | 2.32e-30 | 59 |
defensive cell | 3.00e-30 | 48 |
phagocyte | 3.00e-30 | 48 |
macrophage dendritic cell progenitor | 1.51e-28 | 61 |
myeloid lineage restricted progenitor cell | 5.80e-28 | 66 |
granulocyte monocyte progenitor cell | 3.66e-27 | 67 |
myeloid leukocyte | 7.02e-26 | 72 |
classical monocyte | 2.84e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.84e-25 | 42 |
myeloid cell | 1.67e-11 | 108 |
common myeloid progenitor | 1.67e-11 | 108 |
nongranular leukocyte | 6.85e-07 | 115 |