FFCP PHASE1:Hg19::chr6:21665113..21665128,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C724 | |||
|description=CAGE_peak_at_chr6:21665113..21665128,- | |||
|id=chr6:21665113..21665128,- | |||
|ontology_enrichment_celltype=CL:0002322!8.61e-14!5;CL:0000540!9.09e-12!6;CL:0000031!9.09e-12!6;CL:0000404!9.09e-12!6;CL:1001319!5.59e-09!1;CL:1000600!5.59e-09!1;CL:0000047!6.05e-09!8 | |||
|ontology_enrichment_celltype_v019=CL:1001319;1.46e-50;1!CL:1000600;1.46e-50;1!CL:0000540;1.17e-33;6!CL:0000404;1.17e-33;6!CL:0002319;2.30e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,1.46e-50,1;CL:1000600,1.46e-50,1;CL:0000540,1.17e-33,6;CL:0000031,1.17e-33,6;CL:0000404,1.17e-33,6;CL:0000047,1.43e-25,8;CL:0002319,2.30e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000031;1.17e-33;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004645!5.59e-09!1;UBERON:0001256!5.59e-09!1;UBERON:0001259!5.59e-09!1;UBERON:0003350!9.70e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;1.46e-50;1!UBERON:0001256;1.46e-50;1!UBERON:0001259;1.46e-50;1!UBERON:0001255;4.32e-26;2!UBERON:0001556;4.32e-26;2!UBERON:0000365;2.66e-11;5!UBERON:0005910;1.22e-09;6!UBERON:0003350;1.49e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,1.46e-50,1;UBERON:0001256,1.46e-50,1;UBERON:0001259,1.46e-50,1;UBERON:0001255,4.32e-26,2;UBERON:0001556,4.32e-26,2;UBERON:0000365,2.66e-11,5;UBERON:0005910,1.22e-09,6;UBERON:0003350,1.49e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731842236777572,0.927708378250397,0.232387885739037,0,0,2.18986415445498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.849523652246594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207376382794494,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482259445395058,1.10031549277787,1.24632101408756,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90356865631168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0.218531143927391,0,0.509944148709909,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8259536247158,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:21665113..21665128,- | |||
}} |
Revision as of 10:24, 22 January 2014
Short description: | p@chr6:21665113..21665128, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:21665113..21665128, - |
Coexpression cluster: | C724_transitionalcell_parietal_occipital_duodenum_temporal_non_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 1.46e-50 | 1 |
lower urinary tract cell | 1.46e-50 | 1 |
neuron | 1.17e-33 | 6 |
neuroblast | 1.17e-33 | 6 |
electrically signaling cell | 1.17e-33 | 6 |
neuronal stem cell | 1.43e-25 | 8 |
neural cell | 2.30e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 1.46e-50 | 1 |
wall of urinary bladder | 1.46e-50 | 1 |
mucosa of urinary bladder | 1.46e-50 | 1 |
urinary bladder | 4.32e-26 | 2 |
lower urinary tract | 4.32e-26 | 2 |
urothelium | 2.66e-11 | 5 |
transitional epithelium | 1.22e-09 | 6 |
epithelium of mucosa | 1.49e-07 | 8 |