FFCP PHASE1:Hg19::chr6:20319928..20319935,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3940 | |||
|description=CAGE_peak_at_chr6:20319928..20319935,+ | |||
|id=chr6:20319928..20319935,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.74e-87!140;CL:0002087!1.14e-82!119;CL:0002031!1.42e-80!124;CL:0000037!1.45e-80!172;CL:0000566!1.45e-80!172;CL:0000988!1.09e-75!182;CL:0002032!1.11e-74!165;CL:0000837!1.11e-74!165;CL:0002057!1.33e-52!42;CL:0000766!3.10e-50!76;CL:0000860!4.97e-50!45;CL:0000557!6.54e-48!71;CL:0000839!3.60e-47!70;CL:0002194!8.01e-47!63;CL:0000576!8.01e-47!63;CL:0000040!8.01e-47!63;CL:0000559!8.01e-47!63;CL:0002009!1.54e-46!65;CL:0000763!2.37e-41!112;CL:0000049!2.37e-41!112;CL:0000838!5.12e-30!52;CL:0000542!3.46e-29!53;CL:0000051!3.46e-29!53;CL:0000134!5.37e-23!358;CL:0002320!6.74e-22!365;CL:0000791!1.87e-18!18;CL:0000789!1.87e-18!18;CL:0002420!1.87e-18!18;CL:0002419!1.87e-18!18;CL:0000790!1.87e-18!18;CL:0000219!4.61e-18!390;CL:0000084!1.50e-16!25;CL:0000827!1.50e-16!25;CL:0000048!1.40e-13!430;CL:0000723!5.89e-13!436;CL:0000034!1.08e-12!444;CL:0002393!3.19e-12!9;CL:0002397!3.19e-12!9;CL:0000945!3.12e-11!24;CL:0000826!3.12e-11!24;CL:0000625!1.10e-10!11;CL:0000624!2.93e-08!6;CL:0000236!3.48e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.03e-55;33!CL:0002057;1.03e-55;33!CL:0000473;3.42e-41;39!CL:0000234;3.42e-41;39!CL:0000576;3.17e-39;48!CL:0000766;2.31e-27;69!CL:0002087;3.05e-23;104!CL:0000791;8.83e-20;18!CL:0000789;8.83e-20;18!CL:0002419;8.83e-20;18!CL:0000084;3.27e-15;25!CL:0000738;3.13e-14;136!CL:0002393;3.63e-14;6!CL:0002397;3.63e-14;6!CL:0000763;5.33e-13;100!CL:0000624;3.75e-12;6!CL:0000988;7.19e-11;177!CL:0000542;2.29e-10;53!CL:0000625;1.44e-08;11!CL:0000623;4.33e-08;3!CL:0000767;5.02e-08;3!CL:0000226;5.57e-07;3!CL:0000842;5.57e-07;3!CL:0000219;9.06e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.40e-75,42;CL:0002057,3.40e-75,42;CL:0002087,7.51e-73,115;CL:0000738,8.65e-70,136;CL:0000473,2.08e-67,48;CL:0000234,2.08e-67,48;CL:0002031,3.34e-64,120;CL:0000037,9.55e-60,168;CL:0000988,1.06e-55,177;CL:0002032,1.46e-55,161;CL:0000837,1.46e-55,161;CL:0000766,1.40e-54,72;CL:0002194,5.09e-54,59;CL:0000576,5.09e-54,59;CL:0000040,5.09e-54,59;CL:0000559,5.09e-54,59;CL:0002009,7.43e-52,61;CL:0000839,2.18e-49,66;CL:0000557,1.82e-48,67;CL:0000763,1.03e-36,108;CL:0000049,1.03e-36,108;CL:0000791,9.21e-20,18;CL:0000789,9.21e-20,18;CL:0002420,9.21e-20,18;CL:0002419,9.21e-20,18;CL:0000790,9.21e-20,18;CL:0000134,5.84e-18,354;CL:0002320,3.10e-17,361;CL:0000838,1.26e-16,52;CL:0000542,3.46e-16,53;CL:0000051,3.46e-16,53;CL:0000084,4.13e-15,25;CL:0000827,4.13e-15,25;CL:0002393,4.76e-15,9;CL:0002397,4.76e-15,9;CL:0000219,1.09e-14,386;CL:0000624,4.26e-12,6;CL:0000048,1.31e-11,427;CL:0000034,3.18e-11,441;CL:0000723,3.45e-11,433;CL:0000625,1.42e-08,11;CL:0000623,4.71e-08,3;CL:0000825,4.71e-08,3;CL:0000767,5.16e-08,3;CL:0000226,4.34e-07,3;CL:0000842,4.34e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.10e-55;42!CL:0000790;8.83e-20;18!CL:0000051;2.29e-10;53!CL:0000049;4.26e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.36e-52!102;UBERON:0003061!7.36e-52!102;UBERON:0002193!2.64e-46!112;UBERON:0002371!1.16e-43!80;UBERON:0001474!3.32e-39!86;UBERON:0002405!3.66e-33!115;UBERON:0004765!1.45e-31!101;UBERON:0001434!1.45e-31!101;UBERON:0002384!2.09e-20!375;UBERON:0003081!3.02e-14!216;UBERON:0002204!7.39e-12!167;UBERON:0004177!5.51e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.63e-43,76;UBERON:0002390,9.18e-40,98;UBERON:0003061,9.18e-40,98;UBERON:0001474,3.27e-39,82;UBERON:0002405,1.12e-36,93;UBERON:0002193,8.61e-35,108;UBERON:0004765,1.33e-34,90;UBERON:0001434,6.96e-30,100;UBERON:0002384,3.01e-16,371;UBERON:0002204,4.64e-13,167;UBERON:0003081,2.71e-12,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.410502947249729,0.236132343941038,6.29382842958246,11.5148819429164,5.41856431606266,0,0,0,0,0,1.17440175733939,18.281848481552,11.6315779532682,13.0206522429511,0.223915474239924,0.32389366601898,0.257575567634187,0.581592955118259,1.51150377475524,3.63876091781724,2.32429036905685,2.05583944010913,7.43295290148249,3.45230870786581,4.35473201099471,7.33094912654614,5.5159308917859,7.10033151942209,9.47985406160392,1.12945403725563,2.45615535052061,7.41587498668779,2.75475503133812,2.56743221660875,5.11469700639233,2.63881040149373,3.39088217956774,4.68847225585964,3.19230162491442,3.40431134814684,12.4564449799115,3.51748131359441,5.21482918420201,10.4250645458456,4.23779651843358,12.5214396235772,17.4054313092486,2.11255286311942,5.31510749912609,4.40283155567589,1.46027220490444,1.35159203557356,1.44653028027372,1.99508920618874,0.59675003159727,1.0959849225878,0,0,0.889509253863555,1.28019066769952,0.400395987036012,1.14950487990897,0,0.954053754535364,2.27685187643779,3.52342313622563,2.6759125968766,0,1.68152568894461,0,5.50787356318733,4.71612915298998,3.28962398399215,2.17342444007882,1.62961133316795,1.89379122293893,0,1.89397776704795,1.47302953737419,2.65840673500345,1.89562704635511,2.94610035369053,3.77172107923647,3.61763390128087,3.86890024900188,2.31842468588042,1.92772532110679,1.07016331235885,3.1360657141493,1.81294948316106,1.14966148080576,2.40539211837841,4.04831507231205,1.91139248594458,0.651083453856419,1.90090408889675,1.05402583354441,1.02389288923535,0,0.710331756132051,0.821127996921047,8.87069670188823,10.1627274397733,5.93780055919476,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0.132957960518865,1.66943437013739,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,1.44119953416961,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,3.58672460779287,7.29013812747131,8.19384784466166,7.05886699538616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48121631347465,5.82428342210265,1.70764092485511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,0,0.952927101831156,0,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0.426851060090485,0,0.59873811429845,1.53204296105893,1.48171507906718,0.324621940274555,0,0.228234679033192,0.47003968731907,0,0,1.2847046008296,0,0,0,0,0.223676107892416,0,0.781552381608161,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0,0,0,0,0,0.615424027305347,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0,0,0,0,1.27718352450966,0,0,0,0,0,0.126373159256976,1.65355761355942,0,0,0,0,0,0,0,0.347119476670262,0,0,0.17472666824203,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0.105600336519406,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0.395223263795889,0.243585196761792,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0.398594520940089,0,0,0,0,0,0,0.688859918643263,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0.399764623699716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03114792872958,1.87574891109325,0,0,0,0,0.0645889098360061,0.806971285846153,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr6:20319928..20319935,+ | |||
}} |
Revision as of 10:22, 22 January 2014
Short description: | p@chr6:20319928..20319935, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:20319928..20319935, + |
Coexpression cluster: | C3940_CD14_Natural_CD8_Basophils_CD19_CD4_Neutrophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.63e-43 | 76 |
hematopoietic system | 9.18e-40 | 98 |
blood island | 9.18e-40 | 98 |
bone element | 3.27e-39 | 82 |
immune system | 1.12e-36 | 93 |
hemolymphoid system | 8.61e-35 | 108 |
skeletal element | 1.33e-34 | 90 |
skeletal system | 6.96e-30 | 100 |
connective tissue | 3.01e-16 | 371 |
musculoskeletal system | 4.64e-13 | 167 |
lateral plate mesoderm | 2.71e-12 | 203 |