FFCP PHASE1:Hg19::chr6:3000119..3000136,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4835 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7856 | |||
|TSSclassifier=strong | |||
|UniProt=Q5TD05 | |||
|association_with_transcript=9bp_to_ENST00000397717_5end | |||
|description=CAGE_peak_2_at_NQO2_5end | |||
|id=chr6:3000119..3000136,+ | |||
|ontology_enrichment_celltype=CL:0000763!1.63e-26!112;CL:0000049!1.63e-26!112;CL:0000766!4.22e-22!76;CL:0000557!1.08e-20!71;CL:0002009!1.37e-20!65;CL:0000839!1.99e-20!70;CL:0000860!3.74e-20!45;CL:0002194!1.15e-19!63;CL:0000576!1.15e-19!63;CL:0000040!1.15e-19!63;CL:0000559!1.15e-19!63;CL:0002057!1.85e-18!42;CL:0002032!1.16e-10!165;CL:0000837!1.16e-10!165;CL:0000037!4.28e-10!172;CL:0000566!4.28e-10!172;CL:0000988!6.62e-09!182;CL:0000134!9.70e-09!358;CL:0000219!1.42e-08!390;CL:0000063!1.38e-07!578;CL:0002320!1.43e-07!365;CL:0000738!1.55e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.60e-17;33!CL:0002057;4.60e-17;33!CL:0000473;3.74e-15;39!CL:0000234;3.74e-15;39!CL:0000576;1.64e-11;48!CL:0000766;6.17e-10;69!CL:0000763;2.08e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,7.67e-25,108;CL:0000049,7.67e-25,108;CL:0000766,2.03e-20,72;CL:0000473,1.74e-19,48;CL:0000234,1.74e-19,48;CL:0000557,4.99e-19,67;CL:0002009,6.52e-19,61;CL:0000839,9.14e-19,66;CL:0000860,1.84e-18,42;CL:0002057,1.84e-18,42;CL:0002194,5.32e-18,59;CL:0000576,5.32e-18,59;CL:0000040,5.32e-18,59;CL:0000559,5.32e-18,59;CL:0002032,1.40e-09,161;CL:0000837,1.40e-09,161;CL:0000037,4.72e-09,168;CL:0000134,6.45e-08,354;CL:0000988,6.91e-08,177;CL:0000219,9.04e-08,386;CL:0002320,8.14e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.12e-13;42!CL:0000049;6.26e-08;108 | |||
|ontology_enrichment_disease=DOID:305!7.25e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.17e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.49e-18!102;UBERON:0003061!1.49e-18!102;UBERON:0001474!3.23e-18!86;UBERON:0002371!1.52e-17!80;UBERON:0002405!3.24e-16!115;UBERON:0002193!1.43e-15!112;UBERON:0004765!1.44e-13!101;UBERON:0001434!1.44e-13!101;UBERON:0002384!5.86e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.23e-17,98;UBERON:0003061,5.23e-17,98;UBERON:0001474,1.19e-16,82;UBERON:0002371,5.62e-16,76;UBERON:0002193,3.76e-14,108;UBERON:0002405,3.61e-12,93;UBERON:0004765,7.11e-12,90;UBERON:0001434,7.79e-11,100;UBERON:0002384,3.51e-07,371 | |||
|phase1_expression=9.26559734279839,27.6189675819368,10.5715803071978,19.0139266870948,15.1966772105278,6.10636966870258,53.1929744153452,14.5295570888171,26.1185628199839,4.66894479352867,9.76921635161399,5.02415155899396,5.80287352102598,2.22779435328084,1.65698687863958,2.01697543935533,1.80808358407193,2.19093027116212,2.43966399395253,4.43235809076436,6.73202281106035,3.13454721478088,4.00730381983479,3.01123735160345,4.14290710662849,0.152826811495903,0.164201178899891,0.236132343941038,16.1279353508051,3.83829398097213,9.44378352228064,4.59710612239464,5.4217065380085,5.54631015250181,10.8454080812422,6.53978469442139,4.9912074686924,22.1598163412751,18.2495447197829,10.6335326650767,39.8569544147065,26.5592806135563,26.5302834663212,54.3789413035572,43.8336094679019,55.3091659508221,41.1399395323062,53.0406575548155,66.8965761133424,24.4538533473828,25.1037492398519,33.1075121844019,43.4379557728139,42.6019891165325,60.9419189674538,49.3194929601624,53.7625115613956,71.9115150224271,58.4620234428424,59.3718700090773,85.0318377312725,49.4776950280074,32.3131125347044,37.5077780468771,31.9230162491442,43.1212770765266,53.5627134136194,31.6573318223497,30.7674921867919,28.6689275010754,30.2699751316684,39.0374294146819,59.4949288388863,14.1541041829001,7.44115049877652,8.80566311135179,19.4328531883437,13.6660972485771,6.75047464127737,12.5405607246149,7.55883373356542,4.01861138282195,1.75996244461323,3.82297027883492,4.44754626931777,2.98711155796555,0.800791974072025,1.72425731986345,0.661044872784862,0.954053754535364,2.27685187643779,1.17447437874188,2.6759125968766,2.64342657158052,6.72610275577843,3.16060901730092,2.9506465517075,3.53709686474248,3.90642848099067,13.8764791174263,3.2592226663359,4.2610302516126,3.89653456815823,8.35578426638802,6.77593587192126,1.55073726208535,2.70803863765016,5.37983542847836,5.20237390239513,2.63100647365882,4.14525026678773,4.63684937176084,4.15202376853769,2.1403266247177,3.1360657141493,8.27158201692233,5.74830740402882,5.84166657320471,2.27717722817553,7.96413535810242,9.11516835398986,14.2567806667256,5.87242964403314,4.09557155694139,9.99445812418767,7.81364931745256,4.10563998460523,4.63695509416885,5.08136371988664,4.19990771260117,0,6.03630773733273,6.26526553033299,17.3490793144592,12.0321098552613,15.0640379719257,15.905718941022,14.5990461090791,2.9305793320861,5.98669373148923,3.51339142772504,45.3187601222086,1.82147644146271,6.67411997011973,17.5255592573529,21.2438279505106,17.2845348674525,1.66943437013739,4.57595928624102,1.85728750664782,14.5096557377695,2.58070378531837,6.59566953054429,11.8714667804042,6.29249154314859,6.32771496462155,6.68783892917794,2.06733407335463,2.13459757612026,2.00832367658802,4.02829317109147,12.9246257972147,1.70843440283719,3.30896772311282,4.0507097394088,3.92918804449951,4.26605807989723,5.85579698513276,15.3316637465883,0,5.86245580577303,11.8602375692457,19.3890132074163,3.92484646928281,16.4000744059455,6.07826455989983,4.8991396900891,5.16305917347865,9.930714701554,6.16745360156538,4.2699598291882,8.38669664618344,4.04574346019696,6.60082293141472,5.5577047058576,5.75158225050739,1.72852777344,6.32667865951251,5.30672130611545,8.55707732316674,4.78235777765763,4.46251094846307,5.01806127541208,5.61803226808994,8.16616685019573,5.03620700978249,10.4359038987523,2.37600571456411,5.19260551484969,7.28129089550421,11.4978902690598,4.71341119071385,5.00474079487857,6.92660288710457,5.70670907145089,5.82326812018137,7.81237906314303,5.10444824220095,7.35497506324334,8.96941033037983,4.23863802319124,6.30191301777245,4.84346887420663,9.53269998168828,14.7032316501956,3.88185564154912,7.2103383819287,5.04867548488229,5.33889412125336,3.39456719319505,4.61512470271599,5.94437379543078,4.57813599238317,3.47869535693934,3.81844568827169,2.86804595389004,26.1023731117334,31.144495555549,14.2918549729508,13.994242427075,18.1671012630452,13.1391849267299,6.25798129319264,7.71889125831462,20.7202382028721,1.39310378409594,0.721879481669586,33.1259040111563,35.9085389866357,36.3926655124058,37.1690688108168,37.2573849398015,42.2341702017752,36.4044532032444,38.2631856994425,36.1662327529607,11.8104872739944,2.80483547606892,7.8199062152966,4.41026134156626,34.2238594018943,10.8110993834539,20.6776467338491,7.94633578946371,14.2666588710012,3.94605963686609,0.548751427043128,7.86812272803337,3.21692711717219,2.77765335475589,9.44844085399942,8.31947828223663,2.88662684050547,2.66639931442677,2.11335649624479,3.46479474626577,3.24089858803628,3.99533719692656,11.0628615714299,7.72637545885385,22.6519645600406,7.48813648445561,12.039124145387,0.93733833986777,2.01578553838631,2.83550194484773,2.4180801129769,4.35950907770943,8.81780162079986,59.6122517854092,14.792136914222,8.08579650609011,6.05303804351238,4.67097003677606,10.6676462410844,7.63976851116555,18.7547915536075,8.55362230113526,20.8739810187747,8.70994867747361,2.85826432630578,8.18556915721133,9.59112151433216,4.91366515000365,3.49033632546,0,2.535908257668,5.85063856486715,3.12022310734098,4.11531798819427,2.83698264046557,5.06202140130589,5.00422977803516,5.96883765930587,6.58592269424615,3.58309802723109,3.19852753868291,5.543663110534,3.91871190177462,7.84380112740265,1.99945982364114,15.8110914833548,44.1986240460271,6.32501818449095,9.82461907515489,11.4861935834114,0,5.21212704003285,3.6985738059069,2.86497541183833,17.0369418870161,4.3346767244424,4.74380664690938,4.2353201972317,1.01637849688985,1.30139853857622,1.54657762555539,1.84267891867784,1.91381625495949,38.1993582213063,101.714896129368,111.063357600858,1.34960640891054,3.50119364741774,2.17012018959788,7.48695101510906,10.1704523614382,3.78485796081443,3.16281820480326,5.71797589482666,4.5481500811197,4.1389228517002,7.3064815838898,4.97796755062599,3.73599542212756,7.2446428261214,2.74514739048685,4.54889657470352,12.2957094466612,4.69601254335155,14.5501234294205,4.99306318531491,11.7932214398575,7.93944985020086,5.83155498494637,8.98112302185835,8.07276640310916,9.72243773226737,7.23842645146234,4.45254199334973,1.3878872442239,2.66342587969691,3.12083192852475,1.03850885836724,2.5566283261191,11.4816477112041,1.60405176242628,3.59115856849996,2.52591785962135,4.18809686415449,4.06485686374215,8.12159303233341,5.00599691178696,3.92174884588428,4.38417673959782,2.42768746453614,10.2360045663807,7.82431044271972,3.02282282542995,4.62681758070868,3.79325012561394,3.01013864312912,8.41091701048626,4.15538004464362,3.58199607555485,14.6904117352776,12.5489016491952,1.28225062558195,3.93617574839647,1.62689197332152,9.17065003664728,23.8080608527693,17.6570329830058,2.87132768998086,1.30012049207304,3.21367859688319,7.63698674507764,11.3995976664837,6.44715433849744,2.61889487720608,2.47066563197029,3.33538396002726,4.68746450788555,2.67096106940212,1.65284915360978,2.30628080838127,1.40373983744043,4.8555734810664,4.64845549297286,1.25924938732256,2.7881490806424,4.31247012246524,6.38767236380426,6.08953094452551,3.33583594387056,8.30124343103549,10.4204343420707,1.89827654831236,5.90953601163857,4.09436466098134,1.71175595213568,2.86382923133343,3.92474320099615,0.719489830333259,3.29444435683266,3.41655966802491,3.03273722359974,3.17020642346017,2.52755073743389,5.85160486907508,8.04254515783239,14.7910205459458,4.36799716505554,9.33275850894504,11.3008116620243,4.96228809191512,4.64407282668854,6.13831239355268,2.31510213706675,1.9676842561399,4.66693867014219,8.36523444869325,8.169172473435,1.43411352204052,1.47373561519682,4.9933947207375,2.83808851256478,18.3663642708968,7.57378253807774,7.20999030154859,7.69856384538962,3.07910760721639,3.35151137767894,5.44454924306613,10.9206808901064,0.86101074534246,0,3.54744122829341,1.83778720165568,34.5064374277875,49.7014184642544,52.407541220023,19.7732373629965,23.4476495659131,63.5503844968863,40.5023577928586,35.6906329332422,49.7800171454025,19.2495971052672,21.8085792223118,0,0.432807638929335,4.33965244425326,12.4352492728481,6.78569862871576,10.9158060975449,8.46694330895532,21.1004261178461,12.9166701932191,0,6.26719583092093,2.50634477090067,7.95671355667536,0.321176150207399,1.21079824314629,2.98092366383228,17.518772582544,1.84344458585075,1.56573275524691,2.33588798396672,7.42474762527753,34.8007717369053,29.540975747451,17.0387077439869,27.3119013758212,32.4270111702054,20.0240378236795,5.71381899160387,5.33986295697859,1.44876399560722,8.80822055099881,5.25237866422918,0.890894042497916,6.45037474408387,3.97659059106519,3.37606599385231,7.12375712146598,5.27372397525631,2.11125408127993,2.39097585901284,3.31540698637377,0.755798243562828,5.72704622012067,0.738508832766417,13.9967814447813,7.72867819867011,8.23497403507802,2.55786185113436,2.46608514092334,45.5017875459186,8.89095921157095,5.81599647657131,2.59750674853184,0,16.1465211872845,5.42251999976413,11.5999932069567,5.23449862113298,9.40738506083235,22.9296051314898,1.72371686620732,4.66567381413207,1.56262495439963,3.54296554325536,3.13550740426061,6.10326945268333,6.85591411573593,4.13766666534966,3.29078095730959,33.553046763849,4.1827123283581,2.07765697960252,21.4211064992362,5.7640976097015,8.7064915077479,1.95565269459615,6.06102203490647,2.65633020865401,1.06606955203727,22.482525603062,11.9304994860219,12.1334527787114,26.6202879528273,28.62513001039,32.2217446993618,44.0228659920109,19.3902626356062,0.843992258112108,3.4278889713421,12.8631295004886,0,2.98578579323551,9.37650183735395,4.888241159469,2.96521128680622,2.22415090103705,1.8795950910982,3.03305098413047,0,3.74823113160543,0,9.5875663276724,45.1571505933413,1.97292201424695,7.25944296291983,1.53036380815245,4.67580689250811,19.0910742656406,3.5253985075064,11.9637697087293,9.59876672038947,19.7777738596552,11.9472429772959,3.9845336444171,8.73650439982774,6.59527005673497,17.3446543423448,14.1035914660252,3.31980669659857,28.2057093253451,45.8625010310264,35.3752294697138,43.5211922382009,4.65547279144413,16.1508711845445,2.93774963014692,3.70013196546227,8.54472830322856,2.65905343014691,7.43095254392251,4.40873511383435,4.4825128895264,5.79447867788178,13.544499212486,12.4844889820848,8.75134489096019,23.1928224760921,10.5614655230618,40.5393739540888,9.51329442515298,9.41425616810999,40.2892959663471,6.0679623879319,5.4037825983881,5.06549901900374,6.38732940334862,3.86788897277961,1.05154941711726,2.23425921017803,3.20824593616357,5.74298419661451,9.98395002494956,14.1644595885068,21.6476313718616,4.56847612909739,9.00749708856009,11.6495949527454,16.6232514668242,15.7414289508028,15.3006044549,51.9697102397874,1.86281330544726,3.97614844904652,3.81369537112412,33.436654880724,51.4397492873654,53.5918036057649,40.0453526961671,20.8926527730646,2.85522916292716,5.70238968918752,41.6882191612758,30.4761157064339,6.75842153724202,71.1770737151394,26.6762124274029,10.7204298956005,29.132046696079,9.91647296853524,1.08599920350743,3.45688596480507,0.653174720218818,2.39460383124975,36.7774492957039,1.36310417428337,26.7416535987497,24.4742230242398,18.550964447711,8.01554329441613,7.66949090107602,63.1310431793176,18.3251905802335,8.86335524311866,2.51526888159466,2.89967338743037,14.3888146325466,10.8686397543869,3.65377795142688,6.38341257770182,30.4649969886905,31.5869266468602,21.7505359502058,20.3281031040079,8.79502939001312,11.5188863395708,5.24712939078442,6.50992839673799,15.4820482836319,7.32131740143225,4.84351942942791,1.798532254171,4.74925550256005,8.79564881741557,6.56570267153425,7.52850623034149,0,0.28984205722165,5.82093731258809,8.88110577419453,6.10286447652875,4.54567212660214,2.0125432140206,3.55924488638614,11.2131633514493,10.132471892137,7.1501112268079,8.2798883994195,2.38945150745554,9.4458653554357,3.57104800815397,4.56176828624941,1.86089200190596,1.04349012362347,5.40927392389986,1.52322084867518,1.62748293281865,0.545545977607678,5.26311729508193,9.28067519756987,2.3885753321917,4.40030541129469,4.12074846219351,2.69399591012735,7.57109389371906,11.1719501636236,2.35885750512418,14.0936917661214,15.6427088603468,14.5859158824015,29.6131412452826,6.08902059677057,14.2048665694047,1.09642024789354,6.89087669188936,6.75199133948202,15.7116469807358,73.5413158347407,25.5618452881087,13.0659781156274,4.83904526531058,87.4922786688854,85.9635516827459,50.5417068250559,33.7438144311805,7.6189601713653,8.87510918106234,5.59964708393804,6.18812032226017,12.9161234745612,1.70254786070051,4.23443685579234,6.71421637053334,5.59869534029676,0.383683113910955,13.909400670172,4.560712313821,0,3.3946505990805,1.70059936081346,30.4881980077145,21.7871518009565,16.2182218833243,1.26178792002005,4.00285374142735,1.76337971845342,11.3310826620684,2.6976274540513,5.6678630530234,4.31011419454308,4.51256001329661,1.26035848110859,4.08027789538886,2.74508597574147,2.85538840518309,12.7592034051333,13.8024576316856,4.4022863645203,1.96393632455575,11.8228449594822,8.97467903878131,16.7089626577671,3.30925444736732,11.0937787786936,6.25211208986474,5.50004058410987,9.33499929807551,2.80926563812386,4.93024367714281,8.59185908475232,8.68084545304973,4.05861185241004,0.546974809018219,4.38606213485746,3.47347824872506,1.23109871051734,3.19406069098988,2.67850917939143,4.70797211106354,6.67662164660295,2.50428410486427,4.43511850813194,1.84374380089247,20.2355851136154,9.31185341782594,4.34100305514804,16.5471377237555,6.45142130974001,1.72684804271131,3.45654297815204,20.1795957585928,2.73947616152849,10.3645243784938,23.8875843943525,9.43490383131864,0.94808167039636,65.0951982061501,2.43401581223611,4.81026818838152,3.72989095493466,2.7314956335032,5.53007729451273,3.44181887056222,6.1532640379894,6.56143216645514,2.9637093513365,2.52017555398455,19.8532086825165,27.7106292303456,5.36906072629403,33.3710794291826,2.92603019957447,14.8908632553216,12.8328508570309,2.3196288626764,5.34282092365053,0.233939463462106,2.18845852677505,2.73516208788408,3.61427462524672,1.09940516745429,2.11347980993343,13.6598259851062,4.15263164957519,4.70317296361523,1.71603825227734,4.47785439493089,2.1593931382644,3.26751040359795,4.6492130034174,11.3851166840837,7.42472952040843,8.25060966061788,0.699588091474503,5.53517209677539,5.64631794745107,14.5236873707395,2.92134555298607,8.25712710128173,6.45028124181531,2.20880187070458,3.33158301935482,0.872701380680755,4.2322147241232,7.81189538150178,10.6300394585226,6.48939843185684,44.1582486922776,12.2377440599339,12.163056097098,19.2758888212345,4.54269588951453,14.8869737246449,9.0254714145255,1.81868875723775,1.33982065078089,9.95003327350535,4.65448481378528,4.26467963801962,1.90451545170992,4.39204586884841,8.31801171564496,4.82167009096638,3.30965223046457,1.21270313374932,8.92638666377542,5.13349951627922,3.30025059771479,5.52260981523608,2.99394320891412,5.20980919110237,13.3409182347144,1.9307228228694,9.25199581697845,14.0784565442073,1.95586310692586,0.406896178315738,5.99181096766961,4.6292972525936,0.641136984606466 | |||
|short_description=p2@NQO2 | |||
}} |
Revision as of 09:42, 22 January 2014
Short description: | p2@NQO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NQO2_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENST00000397717_5end |
EntrezGene: | NQO2 |
HGNC: | 7856 |
UniProt: | Q5TD05 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 7.67e-25 | 108 |
common myeloid progenitor | 7.67e-25 | 108 |
myeloid leukocyte | 2.03e-20 | 72 |
defensive cell | 1.74e-19 | 48 |
phagocyte | 1.74e-19 | 48 |
granulocyte monocyte progenitor cell | 4.99e-19 | 67 |
macrophage dendritic cell progenitor | 6.52e-19 | 61 |
myeloid lineage restricted progenitor cell | 9.14e-19 | 66 |
classical monocyte | 1.84e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.84e-18 | 42 |
monopoietic cell | 5.32e-18 | 59 |
monocyte | 5.32e-18 | 59 |
monoblast | 5.32e-18 | 59 |
promonocyte | 5.32e-18 | 59 |
hematopoietic oligopotent progenitor cell | 1.40e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.40e-09 | 161 |
hematopoietic stem cell | 4.72e-09 | 168 |
mesenchymal cell | 6.45e-08 | 354 |
hematopoietic cell | 6.91e-08 | 177 |
motile cell | 9.04e-08 | 386 |
connective tissue cell | 8.14e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.23e-17 | 98 |
blood island | 5.23e-17 | 98 |
bone element | 1.19e-16 | 82 |
bone marrow | 5.62e-16 | 76 |
hemolymphoid system | 3.76e-14 | 108 |
immune system | 3.61e-12 | 93 |
skeletal element | 7.11e-12 | 90 |
skeletal system | 7.79e-11 | 100 |
connective tissue | 3.51e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.17e-07 | 106 |