FFCP PHASE1:Hg19::chr5:179285785..179285846,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51149 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30817 | |||
|TSSclassifier=strong | |||
|UniProt=E9PAK6,E5RI52,B7Z1T6,E5RHY8,E5RGF8,E7EMV9,F6UWW1,E5RHV0,E5RK98,E5RJC6,F6XPR0,E5RIJ7,E5RIC8,Q6NTE8 | |||
|association_with_transcript=0bp_to_ENST00000376931,ENST00000517338,ENST00000518219,ENST00000518235,ENST00000519208,ENST00000519213,ENST00000519318,ENST00000520150,ENST00000520698,ENST00000520995,ENST00000521299,ENST00000521333,ENST00000522157,ENST00000523084,ENST00000523737,ENST00000523835,ENST00000524068,NM_001017987,NM_016175,uc003mky.2,uc003mla.2,uc003mlb.2,uc003mlc.2,uc011dgt.1,uc011dgu.1_5end | |||
|coexpression_cluster_id=C2485 | |||
|description=CAGE_peak_1_at_C5orf45_5end | |||
|id=chr5:179285785..179285846,- | |||
|ontology_enrichment_celltype=CL:0000542!2.66e-13!53;CL:0000051!2.66e-13!53;CL:0000838!4.39e-13!52;CL:0000791!7.73e-09!18;CL:0000789!7.73e-09!18;CL:0002420!7.73e-09!18;CL:0002419!7.73e-09!18;CL:0000790!7.73e-09!18;CL:0000945!4.43e-07!24;CL:0000826!4.43e-07!24;CL:0000236!5.93e-07!14;CL:0000084!8.38e-07!25;CL:0000827!8.38e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.61e-09;18!CL:0000789;7.61e-09;18!CL:0002419;7.61e-09;18!CL:0000542;1.61e-08;53!CL:0000236;2.15e-07;13!CL:0000945;3.97e-07;24!CL:0000084;7.04e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.66e-13,53;CL:0000051,2.66e-13,53;CL:0000838,4.39e-13,52;CL:0000791,7.72e-09,18;CL:0000789,7.72e-09,18;CL:0002420,7.72e-09,18;CL:0002419,7.72e-09,18;CL:0000790,7.72e-09,18;CL:0000945,4.42e-07,24;CL:0000826,4.42e-07,24;CL:0000236,5.93e-07,14;CL:0000084,8.38e-07,25;CL:0000827,8.38e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.11e-09;82!CL:0000790;7.61e-09;18!CL:0000051;1.61e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.84e-30!115;UBERON:0000073!6.96e-24!94;UBERON:0001016!6.96e-24!94;UBERON:0001049!2.37e-23!57;UBERON:0005068!2.37e-23!57;UBERON:0006241!2.37e-23!57;UBERON:0007135!2.37e-23!57;UBERON:0001017!2.57e-23!82;UBERON:0005743!3.13e-23!86;UBERON:0000955!3.27e-20!69;UBERON:0006238!3.27e-20!69;UBERON:0002346!4.44e-19!90;UBERON:0002616!1.74e-18!59;UBERON:0002780!1.80e-18!41;UBERON:0001890!1.80e-18!41;UBERON:0006240!1.80e-18!41;UBERON:0003075!5.76e-18!86;UBERON:0007284!5.76e-18!86;UBERON:0003080!5.79e-18!42;UBERON:0001893!4.01e-15!34;UBERON:0002020!5.60e-15!34;UBERON:0003528!5.60e-15!34;UBERON:0002791!1.03e-14!33;UBERON:0001869!6.09e-14!32;UBERON:0003056!3.16e-13!61;UBERON:0002619!2.99e-12!22;UBERON:0000956!1.29e-11!25;UBERON:0000203!1.29e-11!25;UBERON:0001950!1.68e-11!20;UBERON:0000924!2.33e-11!173;UBERON:0006601!2.33e-11!173;UBERON:0000153!4.57e-11!129;UBERON:0007811!4.57e-11!129;UBERON:0004121!1.63e-10!169;UBERON:0000033!3.50e-10!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;9.28e-14;53!UBERON:0002616;9.28e-14;53!UBERON:0002780;1.03e-13;41!UBERON:0001890;1.03e-13;41!UBERON:0001893;6.50e-13;34!UBERON:0003528;1.02e-12;34!UBERON:0002020;1.02e-12;34!UBERON:0002791;1.05e-12;32!UBERON:0001869;1.55e-12;32!UBERON:0002619;2.51e-12;22!UBERON:0000956;1.14e-11;25!UBERON:0000203;1.14e-11;25!UBERON:0001950;1.45e-11;20!UBERON:0000955;6.80e-10;68!UBERON:0001017;4.87e-09;75!UBERON:0001016;1.02e-08;83!UBERON:0007023;1.04e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.74e-29,114;UBERON:0001016,3.01e-24,89;UBERON:0001049,7.61e-24,56;UBERON:0005068,7.61e-24,56;UBERON:0006241,7.61e-24,56;UBERON:0007135,7.61e-24,56;UBERON:0001017,1.14e-23,81;UBERON:0000073,1.32e-22,53;UBERON:0002616,1.32e-22,53;UBERON:0000955,1.43e-20,68;UBERON:0006238,1.43e-20,68;UBERON:0002346,1.83e-19,86;UBERON:0002780,1.80e-18,41;UBERON:0001890,1.80e-18,41;UBERON:0003080,1.80e-18,41;UBERON:0006240,1.80e-18,41;UBERON:0003075,2.40e-18,82;UBERON:0007284,2.40e-18,82;UBERON:0001893,4.01e-15,34;UBERON:0003528,5.60e-15,34;UBERON:0002020,5.60e-15,34;UBERON:0002791,3.78e-14,32;UBERON:0001869,6.09e-14,32;UBERON:0003056,9.37e-14,61;UBERON:0002619,2.98e-12,22;UBERON:0000956,1.28e-11,25;UBERON:0000203,1.28e-11,25;UBERON:0001950,1.68e-11,20;UBERON:0004121,1.74e-11,171;UBERON:0000924,1.74e-11,171;UBERON:0006601,1.74e-11,171;UBERON:0011216,1.91e-11,223;UBERON:0010371,4.96e-11,104;UBERON:0010314,3.90e-08,132 | |||
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| |||
|short_description=p1@C5orf45 | |||
}} |
Revision as of 09:28, 22 January 2014
Short description: | p1@C5orf45 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C5orf45_5end |
Coexpression cluster: | C2485_pineal_cerebellum_pituitary_parietal_occipital_CD4_duodenum |
Association with transcript: | 0bp_to_ENST00000376931, ENST00000517338, ENST00000518219, ENST00000518235, ENST00000519208, ENST00000519213, ENST00000519318, ENST00000520150, ENST00000520698, ENST00000520995, ENST00000521299, ENST00000521333, ENST00000522157, ENST00000523084, ENST00000523737, ENST00000523835, ENST00000524068, NM_001017987, NM_016175, uc003mky.2, uc003mla.2, uc003mlb.2, uc003mlc.2, uc011dgt.1, uc011dgu.1_5end |
EntrezGene: | C5orf45 |
HGNC: | 30817 |
UniProt: | E9PAK6E5RI52B7Z1T6E5RHY8E5RGF8E7EMV9F6UWW1E5RHV0E5RK98E5RJC6F6XPR0E5RIJ7E5RIC8Q6NTE8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.66e-13 | 53 |
common lymphoid progenitor | 2.66e-13 | 53 |
lymphoid lineage restricted progenitor cell | 4.39e-13 | 52 |
mature alpha-beta T cell | 7.72e-09 | 18 |
alpha-beta T cell | 7.72e-09 | 18 |
immature T cell | 7.72e-09 | 18 |
mature T cell | 7.72e-09 | 18 |
immature alpha-beta T cell | 7.72e-09 | 18 |
lymphocyte of B lineage | 4.42e-07 | 24 |
pro-B cell | 4.42e-07 | 24 |
B cell | 5.93e-07 | 14 |
T cell | 8.38e-07 | 25 |
pro-T cell | 8.38e-07 | 25 |