FFCP PHASE1:Hg19::chr5:169173501..169173512,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C763 | |||
|description=CAGE_peak_at_chr5:169173501..169173512,+ | |||
|id=chr5:169173501..169173512,+ | |||
|ontology_enrichment_celltype=CL:0000080!5.56e-21!6;CL:0000945!6.71e-14!24;CL:0000826!6.71e-14!24;CL:0000838!6.09e-09!52;CL:0000542!9.12e-09!53;CL:0000051!9.12e-09!53;CL:0002535!9.19e-08!2;CL:0000988!1.59e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000945;6.17e-17;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.43e-17,24;CL:0000826,6.43e-17,24;CL:0000838,4.12e-12,52;CL:0000542,6.89e-12,53;CL:0000051,6.89e-12,53;CL:0000988,6.97e-09,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:630!1.07e-14!1;DOID:0050177!1.07e-14!1;DOID:0050427!1.07e-14!1;DOID:4468!6.58e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:630;8.64e-26;1!DOID:0050177;8.64e-26;1!DOID:0050427;8.64e-26;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,9.79e-26,1;DOID:0050177,9.79e-26,1;DOID:0050427,9.79e-26,1 | |||
|ontology_enrichment_uberon=UBERON:0002331!7.59e-13!10;UBERON:0000358!7.59e-13!10;UBERON:0000307!7.59e-13!10;UBERON:0000091!7.59e-13!10;UBERON:0000087!7.59e-13!10;UBERON:0007806!7.59e-13!10;UBERON:0008780!7.59e-13!10;UBERON:0005728!7.59e-13!10;UBERON:0000178!9.50e-09!15;UBERON:0000179!9.50e-09!15;UBERON:0000463!9.50e-09!15;UBERON:0004177!1.85e-08!7;UBERON:0006955!9.19e-08!2;UBERON:0004801!9.19e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.94e-23;10!UBERON:0000178;1.27e-15;15!UBERON:0000179;1.27e-15;15!UBERON:0000463;1.27e-15;15!UBERON:0000478;5.00e-10;24!UBERON:0002390;9.39e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.10e-23,10;UBERON:0000358,4.10e-23,10;UBERON:0000307,4.10e-23,10;UBERON:0000091,4.10e-23,10;UBERON:0000087,4.10e-23,10;UBERON:0007010,4.10e-23,10;UBERON:0007806,4.10e-23,10;UBERON:0008780,4.10e-23,10;UBERON:0005728,4.10e-23,10;UBERON:0000178,1.12e-15,15;UBERON:0000179,1.12e-15,15;UBERON:0000463,1.12e-15,15;UBERON:0000478,4.63e-10,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59805579543034,2.8735206307481,1.73163718890094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0.210998064528027,0,0,0,0,0,0,2.96521128680622,1.85345908419754,3.02823653565821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699588091474503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28227396921293 | |||
|short_description=p@chr5:169173501..169173512,+ | |||
}} |
Revision as of 08:56, 22 January 2014
Short description: | p@chr5:169173501..169173512, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:169173501..169173512, + |
Coexpression cluster: | C763_cord_B_splenic_xeroderma_b_hairy_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.43e-17 | 24 |
pro-B cell | 6.43e-17 | 24 |
lymphoid lineage restricted progenitor cell | 4.12e-12 | 52 |
lymphocyte | 6.89e-12 | 53 |
common lymphoid progenitor | 6.89e-12 | 53 |
hematopoietic cell | 6.97e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 4.10e-23 | 10 |
blastocyst | 4.10e-23 | 10 |
blastula | 4.10e-23 | 10 |
bilaminar disc | 4.10e-23 | 10 |
inner cell mass | 4.10e-23 | 10 |
cleaving embryo | 4.10e-23 | 10 |
connecting stalk | 4.10e-23 | 10 |
inner cell mass derived epiblast | 4.10e-23 | 10 |
extraembryonic mesoderm | 4.10e-23 | 10 |
blood | 1.12e-15 | 15 |
haemolymphatic fluid | 1.12e-15 | 15 |
organism substance | 1.12e-15 | 15 |
extraembryonic structure | 4.63e-10 | 24 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 9.79e-26 | 1 |
monogenic disease | 9.79e-26 | 1 |
xeroderma pigmentosum | 9.79e-26 | 1 |