FFCP PHASE1:Hg19::chr5:146889655..146889679,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1809 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3015 | |||
|TSSclassifier=strong | |||
|UniProt=B3SXQ8,Q14195,Q6DEN2 | |||
|association_with_transcript=-36bp_to_ENST00000343218,NM_001197294_5end | |||
|coexpression_cluster_id=C1527 | |||
|description=CAGE_peak_4_at_DPYSL3_5end | |||
|id=chr5:146889655..146889679,- | |||
|ontology_enrichment_celltype=CL:0000055!2.32e-37!180;CL:0000222!2.42e-18!119;CL:0000192!5.08e-18!42;CL:0000514!5.08e-18!42;CL:0000183!1.05e-17!59;CL:0000393!4.73e-17!60;CL:0000211!4.73e-17!60;CL:0000187!9.27e-17!54;CL:0000359!3.52e-16!32;CL:0000680!5.45e-16!57;CL:0000056!5.45e-16!57;CL:0000355!5.45e-16!57;CL:0002321!4.50e-15!248;CL:0000220!5.80e-15!246;CL:0000057!1.24e-14!75;CL:0000133!3.33e-08!59;CL:0002319!3.83e-08!25;CL:0000243!5.83e-07!15;CL:0000125!5.83e-07!15;CL:0000030!5.83e-07!15;CL:0000339!5.83e-07!15;CL:0000095!6.92e-07!17;CL:0000123!6.92e-07!17;CL:0002539!8.18e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.02e-16;32!CL:0000192;1.45e-13;43!CL:0000187;2.02e-09;55!CL:0000393;1.47e-08;61!CL:0000211;1.47e-08;61!CL:0002319;1.61e-08;25!CL:0000134;1.63e-07;55!CL:0000048;1.81e-07;58!CL:0000243;2.06e-07;15!CL:0000125;2.06e-07;15!CL:0000095;2.85e-07;17!CL:0002539;3.22e-07;10!CL:0000723;9.55e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,7.53e-19,43;CL:0000514,7.53e-19,43;CL:0000222,1.82e-18,121;CL:0000393,9.62e-18,61;CL:0000211,9.62e-18,61;CL:0000187,2.10e-17,55;CL:0000359,3.74e-17,32;CL:0000680,2.88e-16,58;CL:0000056,2.88e-16,58;CL:0000355,2.88e-16,58;CL:0000057,1.94e-15,76;CL:0002321,1.61e-13,250;CL:0002319,1.39e-08,25;CL:0000133,3.76e-08,59;CL:0000243,2.53e-07,15;CL:0000125,2.53e-07,15;CL:0000030,2.53e-07,15;CL:0000339,2.53e-07,15;CL:0000095,3.04e-07,17;CL:0000123,3.04e-07,17;CL:0002539,3.64e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;1.45e-13;43!CL:0000355;2.50e-08;58!CL:0000339;2.06e-07;15 | |||
|ontology_enrichment_disease=DOID:2394!5.05e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.64e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.56e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.54e-24!79;UBERON:0007798!1.54e-24!79;UBERON:0004872!1.57e-23!84;UBERON:0001981!7.11e-23!60;UBERON:0007500!7.11e-23!60;UBERON:0004537!7.11e-23!60;UBERON:0006965!7.11e-23!60;UBERON:0000119!4.11e-21!312;UBERON:0000483!6.29e-21!309;UBERON:0001637!6.91e-21!42;UBERON:0003509!6.91e-21!42;UBERON:0004572!6.91e-21!42;UBERON:0000055!2.38e-20!69;UBERON:0003914!2.15e-19!118;UBERON:0004535!1.45e-18!110;UBERON:0001009!6.76e-18!113;UBERON:0000468!9.02e-18!659;UBERON:0000477!3.05e-17!286;UBERON:0000475!1.04e-16!365;UBERON:0004573!1.18e-16!33;UBERON:0004571!1.18e-16!33;UBERON:0000914!1.36e-16!83;UBERON:0002329!1.36e-16!83;UBERON:0003077!1.36e-16!83;UBERON:0003059!1.36e-16!83;UBERON:0007282!1.36e-16!83;UBERON:0009618!1.36e-16!83;UBERON:0007285!1.36e-16!83;UBERON:0000481!3.17e-16!347;UBERON:0004290!5.14e-16!70;UBERON:0000467!9.59e-16!625;UBERON:0002385!1.11e-15!63;UBERON:0001015!1.11e-15!63;UBERON:0000383!1.11e-15!63;UBERON:0000480!1.79e-15!626;UBERON:0001134!2.36e-15!61;UBERON:0002036!2.36e-15!61;UBERON:0003082!2.36e-15!61;UBERON:0005256!3.08e-15!143;UBERON:0004111!4.34e-15!241;UBERON:0000025!1.88e-14!194;UBERON:0000486!2.99e-14!82;UBERON:0000490!3.15e-14!138;UBERON:0000922!1.00e-12!612;UBERON:0002050!1.18e-11!605;UBERON:0005423!1.18e-11!605;UBERON:0000923!1.73e-11!604;UBERON:0005291!1.73e-11!604;UBERON:0006598!1.73e-11!604;UBERON:0002532!1.73e-11!604;UBERON:0000947!4.90e-11!21;UBERON:0010191!4.90e-11!21;UBERON:0004121!6.99e-09!169;UBERON:0000924!1.59e-08!173;UBERON:0006601!1.59e-08!173;UBERON:0002100!3.35e-08!216;UBERON:0003104!7.39e-08!238;UBERON:0009142!7.39e-08!238;UBERON:0001135!2.31e-07!15;UBERON:0001801!2.39e-07!14;UBERON:0000970!4.14e-07!20;UBERON:0000064!4.95e-07!219;UBERON:0004237!8.18e-07!10;UBERON:0004695!8.18e-07!10;UBERON:0002111!8.18e-07!10;UBERON:0004178!8.18e-07!10;UBERON:0000019!9.49e-07!19;UBERON:0000047!9.49e-07!19;UBERON:0004088!9.49e-07!19;UBERON:0003072!9.49e-07!19;UBERON:0003071!9.49e-07!19;UBERON:0004128!9.49e-07!19;UBERON:0000948!9.54e-07!24;UBERON:0005498!9.54e-07!24;UBERON:0004140!9.54e-07!24;UBERON:0009881!9.54e-07!24;UBERON:0004141!9.54e-07!24;UBERON:0003084!9.54e-07!24;UBERON:0007005!9.54e-07!24;UBERON:0004139!9.54e-07!24;UBERON:0004291!9.54e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.55e-16;33!UBERON:0004571;2.55e-16;33!UBERON:0001637;4.18e-16;42!UBERON:0003509;4.18e-16;42!UBERON:0004572;4.18e-16;42!UBERON:0007500;2.65e-13;56!UBERON:0001981;2.65e-13;56!UBERON:0004537;2.65e-13;56!UBERON:0000947;9.05e-12;21!UBERON:0010191;9.05e-12;21!UBERON:0003914;7.97e-11;74!UBERON:0002049;5.81e-10;75!UBERON:0007798;5.81e-10;75!UBERON:0000055;1.06e-09;65!UBERON:0001135;1.07e-07;15!UBERON:0001801;1.40e-07;14!UBERON:0004237;3.22e-07;10!UBERON:0004695;3.22e-07;10!UBERON:0002111;3.22e-07;10!UBERON:0004178;3.22e-07;10!UBERON:0000970;3.86e-07;20!UBERON:0000019;9.08e-07;19!UBERON:0000047;9.08e-07;19!UBERON:0004088;9.08e-07;19!UBERON:0010230;9.08e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,7.31e-25,78;UBERON:0007798,7.31e-25,78;UBERON:0004872,1.32e-24,83;UBERON:0007500,8.87e-24,59;UBERON:0001981,8.87e-24,59;UBERON:0004537,8.87e-24,59;UBERON:0006965,8.87e-24,59;UBERON:0001637,3.56e-22,42;UBERON:0003509,3.56e-22,42;UBERON:0004572,3.56e-22,42;UBERON:0003914,1.47e-21,117;UBERON:0000055,1.49e-20,68;UBERON:0004535,1.79e-19,109;UBERON:0001009,2.78e-18,112;UBERON:0004573,1.17e-17,33;UBERON:0004571,1.17e-17,33;UBERON:0007503,2.83e-17,78;UBERON:0000119,1.96e-16,309;UBERON:0007524,2.92e-16,73;UBERON:0000483,2.96e-16,306;UBERON:0002329,3.58e-16,71;UBERON:0003059,3.58e-16,71;UBERON:0007282,3.58e-16,71;UBERON:0004290,3.58e-16,71;UBERON:0009618,3.58e-16,71;UBERON:0003077,6.02e-16,72;UBERON:0007285,6.02e-16,72;UBERON:0002385,8.92e-16,64;UBERON:0001015,8.92e-16,64;UBERON:0000383,8.92e-16,64;UBERON:0000490,1.15e-15,148;UBERON:0001134,2.01e-15,62;UBERON:0002036,2.01e-15,62;UBERON:0003082,2.01e-15,62;UBERON:0000486,3.28e-14,83;UBERON:0005256,4.87e-14,122;UBERON:0003104,1.25e-13,160;UBERON:0009142,1.25e-13,160;UBERON:0004111,4.25e-12,240;UBERON:0000025,8.35e-12,192;UBERON:0000947,1.15e-11,21;UBERON:0010191,1.15e-11,21;UBERON:0000922,3.44e-09,592;UBERON:0002050,1.69e-08,564;UBERON:0000923,1.97e-08,560;UBERON:0010316,1.97e-08,560;UBERON:0005291,1.97e-08,560;UBERON:0006598,1.97e-08,560;UBERON:0010317,1.97e-08,560;UBERON:0002532,1.97e-08,560;UBERON:0005423,3.19e-08,581;UBERON:0001135,9.47e-08,15;UBERON:0001801,9.83e-08,14;UBERON:0000926,1.85e-07,315;UBERON:0004120,1.85e-07,315;UBERON:0006603,1.85e-07,315;UBERON:0000948,3.34e-07,24;UBERON:0005498,3.34e-07,24;UBERON:0004140,3.34e-07,24;UBERON:0009881,3.34e-07,24;UBERON:0004141,3.34e-07,24;UBERON:0003084,3.34e-07,24;UBERON:0007005,3.34e-07,24;UBERON:0004139,3.34e-07,24;UBERON:0004291,3.34e-07,24;UBERON:0004237,3.64e-07,10;UBERON:0004695,3.64e-07,10;UBERON:0002111,3.64e-07,10;UBERON:0004178,3.64e-07,10;UBERON:0002100,7.56e-07,199 | |||
|phase1_expression=0,0.856402095563933,1.12763523276777,0,1.34088328328186,3.48935409640147,0,0,0.261185628199839,5.40614660303319,0,2.18441372130172,1.84636884759917,4.82688776544182,2.98257638155124,6.72325146451775,12.0538905604795,10.2243412654232,19.5173119516203,12.3121058076788,8.36402834101437,14.418917187992,11.7356754723733,18.4780473848394,10.0434111675842,0,0,0.0787107813136792,0,0,0,0.919421224478927,4.2168828628955,0.369754010166788,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03630773733273,5.75381528295886,11.5660528763061,5.51471701699479,5.64901423947212,7.95285947051099,12.1658717575659,17.0162670895322,23.0598573361067,24.9450791368478,1.76821751921912,2.91436230634034,4.82019775619758,0,0,0,0,0,0,14.3108933304028,2.58070378531837,9.37279354340505,9.04492707078415,5.03399323451887,6.05259692268148,11.076733226451,0.775250277507987,2.13459757612026,1.67360306382335,1.61131726843659,3.04108842287405,1.46437234528902,7.35326160691737,6.48113558305408,6.1616812516015,4.71511682514957,5.96840846561608,3.06633274931766,6.6448596169769,8.97688545258996,0,0,0,5.4666914686485,10.3837019564955,8.07696002960635,18.0707071071753,21.6347713140998,7.8494864019923,13.8773694448616,4.9333509683432,7.15785381419462,4.71487352243908,10.1346379930344,2.57307626996383,1.72852777344,13.824964478194,2.49728061464256,3.4228309292667,1.04614076386261,5.40198693761318,1.45685649931318,3.79217178096071,5.51216262388212,5.28187564440602,3.20309921644873,9.50402285825643,8.15980866619238,6.37112953356618,1.43723628363248,5.38675564653012,4.50426671539071,4.71008996323111,3.5118209670467,3.37136575378922,6.00952235626387,9.98203211808185,6.27863724911017,3.63047560991565,3.39091041855299,11.1033705551229,7.4197821051676,5.15281080091258,4.09457083929498,4.72573730275545,4.57953924257634,5.55354303337052,2.76149695926898,7.92065678412178,7.81021103536552,5.74286959897549,6.44330250779853,1.35282597214308,2.72746120590835,1.14721838155602,1.70763188581434,2.78312513475119,2.32387885739037,3.21349270547648,2.52320850875628,4.37972830890996,6.25798129319264,5.14592750554308,4.14404764057442,0.928735856063958,0.721879481669586,0.236613600079688,0.337169380156203,0.723033089650446,0.110293972732394,0.871517776369625,1.18635309555548,0.539325232640658,0.392442930250692,0.38474715694639,2.21446636387394,5.60967095213783,12.347220339942,1.47008711385542,0,0,0,0,0,8.23525489432923,0.109750285408626,0,0.100528972411631,0.740707561268237,7.49359102213747,16.6389565644733,10.1031939417691,24.8091066646664,27.1214083684748,1.58803092537181,0.462985512576611,1.33177906564219,0,0,0,0,0,0,2.01578553838631,1.70130116690864,0.806026704325635,2.03443756959773,1.15014803749563,0,0,0,0,0.12624243342638,0.380987365753014,0,0,0,0.616964956219941,0,0,2.13049060256185,3.05172048183296,1.39342743059805,7.36848779819333,0,2.535908257668,6.91439103120663,3.12022310734098,4.37252536245642,4.25547396069835,1.5985330740966,1.42977993658148,1.08524321078289,9.87888404136923,2.60588947434988,1.06617584622764,10.2953743481346,5.42590878707255,5.22920075160176,7.29802835629016,0,0,0,2.63587341040741,1.14861935834114,7.13184525203592,0.723906533337896,1.02738161275192,2.14873155887875,0,0,0,0,10.6719742173435,19.5209780786433,2.31986643833309,7.37071567471135,3.82763250991898,0,0,0,3.55805325985506,4.50153468953709,2.17012018959788,2.07970861530807,1.42743191037729,0.473107245101804,2.6942525448324,7.22270639346525,6.82222512167955,2.0694614258501,7.3064815838898,11.0621501125022,5.5605513259573,1.17480694477644,2.05886054286514,0,0,0,1.81876542867756,0,2.72151263996712,0.248107807818777,1.99500565274481,0.280660094433074,1.53766979106841,2.55853624533352,5.62988724002626,1.48418066444991,6.9394362211195,7.28003073783821,8.21271560138091,17.1353961630595,5.92672930145792,0,1.20303882181971,0.368323955743585,7.57775357886405,9.650831904356,4.06485686374215,3.15839729035188,1.84836809050595,9.41219723012226,10.2297457257282,1.26661954671451,2.27466768141793,6.12337338995456,11.8753753856177,1.54227252690289,19.5081435031574,10.5354852509519,1.78413391131527,0.831076008928724,5.1491193586101,0,0,2.3080511260475,2.29610251989794,0.325378394664303,0.515205058238611,2.83865340936865,2.39277549769705,1.14853107599234,0.650060246036521,16.068392984416,4.15684088656124,1.23238893691716,2.14905144616581,3.44591431211326,0.537101224341368,1.16013355131383,2.47157219506693,3.65031346151623,0.165284915360978,0.960950336825531,0.893288987462089,0.50578890427775,12.0859842817294,11.0184321390724,18.8200062943362,15.4016790088044,9.04920251538937,19.1385258256516,17.9764492530802,10.3049918454234,1.86079184679834,6.01120906965579,7.81583795087682,4.86205803491534,1.71175595213568,9.86430068570404,21.1936132853792,2.87795932133304,6.0398146541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| |||
|short_description=p4@DPYSL3 | |||
}} |
Revision as of 08:09, 22 January 2014
Short description: | p4@DPYSL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DPYSL3_5end |
Coexpression cluster: | C1527_glioblastoma_Lens_mesothelioma_mesenchymal_granulosa_Ciliary_Smooth |
Association with transcript: | -36bp_to_ENST00000343218, NM_001197294_5end |
EntrezGene: | DPYSL3 |
HGNC: | 3015 |
UniProt: | B3SXQ8Q14195Q6DEN2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 7.53e-19 | 43 |
smooth muscle myoblast | 7.53e-19 | 43 |
mesodermal cell | 1.82e-18 | 121 |
electrically responsive cell | 9.62e-18 | 61 |
electrically active cell | 9.62e-18 | 61 |
muscle cell | 2.10e-17 | 55 |
vascular associated smooth muscle cell | 3.74e-17 | 32 |
muscle precursor cell | 2.88e-16 | 58 |
myoblast | 2.88e-16 | 58 |
multi-potent skeletal muscle stem cell | 2.88e-16 | 58 |
fibroblast | 1.94e-15 | 76 |
embryonic cell | 1.61e-13 | 250 |
neural cell | 1.39e-08 | 25 |
neurectodermal cell | 3.76e-08 | 59 |
glial cell (sensu Vertebrata) | 2.53e-07 | 15 |
glial cell | 2.53e-07 | 15 |
glioblast | 2.53e-07 | 15 |
glioblast (sensu Vertebrata) | 2.53e-07 | 15 |
neuron associated cell | 3.04e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 3.04e-07 | 17 |
aortic smooth muscle cell | 3.64e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.56e-07 | 14 |