FFCP PHASE1:Hg19::chr5:134906663..134906677,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C607 | |||
|description=CAGE_peak_at_chr5:134906663..134906677,- | |||
|id=chr5:134906663..134906677,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000312;3.10e-11;5!CL:0000240;1.38e-09;6!CL:0000311;1.38e-09;6!CL:0000079;1.38e-09;6!CL:0000237;1.38e-09;6!CL:0000362;8.14e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000312,3.26e-11,5;CL:0000240,1.44e-09,6;CL:0000311,1.44e-09,6;CL:0000079,1.44e-09,6;CL:0000237,1.44e-09,6;CL:0000036,1.44e-09,6;CL:0000357,1.44e-09,6;CL:0000114,1.44e-09,6;CL:0000362,8.37e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;1.38e-09;6!CL:0000114;1.38e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;8.82e-14;4!DOID:4362;3.10e-11;5!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,8.82e-14,4;DOID:4362,2.94e-11,5;DOID:1325,1.89e-08,7;DOID:3904,1.89e-08,7;DOID:3905,7.48e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.61e-26!115;UBERON:0005743!6.78e-14!86;UBERON:0000153!1.07e-12!129;UBERON:0007811!1.07e-12!129;UBERON:0000033!1.88e-12!123;UBERON:0001049!3.86e-12!57;UBERON:0005068!3.86e-12!57;UBERON:0006241!3.86e-12!57;UBERON:0007135!3.86e-12!57;UBERON:0000073!4.43e-12!94;UBERON:0001016!4.43e-12!94;UBERON:0001017!6.90e-12!82;UBERON:0002020!6.83e-11!34;UBERON:0003528!6.83e-11!34;UBERON:0000956!8.62e-11!25;UBERON:0000203!8.62e-11!25;UBERON:0000955!1.62e-10!69;UBERON:0006238!1.62e-10!69;UBERON:0002771!1.97e-10!3;UBERON:0003080!3.46e-10!42;UBERON:0002619!3.79e-10!22;UBERON:0002616!3.94e-10!59;UBERON:0003075!4.10e-10!86;UBERON:0007284!4.10e-10!86;UBERON:0004121!7.44e-10!169;UBERON:0001869!8.23e-10!32;UBERON:0000924!1.80e-09!173;UBERON:0006601!1.80e-09!173;UBERON:0002346!1.83e-09!90;UBERON:0002791!1.87e-09!33;UBERON:0000200!3.45e-09!6;UBERON:0001893!4.03e-09!34;UBERON:0001950!6.63e-09!20;UBERON:0002780!9.12e-09!41;UBERON:0001890!9.12e-09!41;UBERON:0006240!9.12e-09!41;UBERON:0003056!1.28e-08!61;UBERON:0001871!7.92e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;6.58e-50;1!UBERON:0001003;3.25e-14;15!UBERON:0007376;3.25e-14;15!UBERON:0000014;1.29e-13;4!UBERON:0000002;1.38e-09;6!UBERON:0001560;1.38e-09;6!UBERON:0010371;1.23e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,6.58e-50,1;UBERON:0001003,3.36e-14,15;UBERON:0007376,3.36e-14,15;UBERON:0007383,3.36e-14,15;UBERON:0000014,1.29e-13,4;UBERON:0000002,1.32e-09,6;UBERON:0001560,1.32e-09,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41450627898976,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.562677665642051,0,0,0.211125408127993,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,2.92789862985067,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0.472834243795189,0.157363764404994,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0.886068179966986,0.122026264901963,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0.638535436228605,0,0,0.0691572524642179,0.322951291263702,0,0,0,0.550285795565037,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0,4.5178432815584,0,0,0.308696632431779,0.655678681511872,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0.684466602170562,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:134906663..134906677,- | |||
}} |
Revision as of 07:32, 22 January 2014
Short description: | p@chr5:134906663..134906677, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:134906663..134906677, - |
Coexpression cluster: | C607_small_cervical_Keratinocyte_Sebocyte_maxillary_normal_skin |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratinocyte | 3.26e-11 | 5 |
stratified squamous epithelial cell | 1.44e-09 | 6 |
keratin accumulating cell | 1.44e-09 | 6 |
stratified epithelial cell | 1.44e-09 | 6 |
keratinizing barrier epithelial cell | 1.44e-09 | 6 |
epithelial fate stem cell | 1.44e-09 | 6 |
stratified epithelial stem cell | 1.44e-09 | 6 |
surface ectodermal cell | 1.44e-09 | 6 |
epidermal cell | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
surface | 6.58e-50 | 1 |
skin epidermis | 3.36e-14 | 15 |
outer epithelium | 3.36e-14 | 15 |
enveloping layer of ectoderm | 3.36e-14 | 15 |
zone of skin | 1.29e-13 | 4 |
uterine cervix | 1.32e-09 | 6 |
neck of organ | 1.32e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 8.82e-14 | 4 |
cervical cancer | 2.94e-11 | 5 |
bronchus cancer | 1.89e-08 | 7 |
bronchogenic carcinoma | 1.89e-08 | 7 |
lung carcinoma | 7.48e-07 | 9 |