FFCP PHASE1:Hg19::chr5:131826457..131826514,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3659 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6116 | |||
|TSSclassifier=strong | |||
|UniProt=P10914,C9J9C5,Q6FHN8 | |||
|association_with_transcript=0bp_to_ENST00000245414,ENST00000437654,ENST00000459982,ENST00000463784,NM_002198,uc003kxa.2,uc003kxd.2_5end | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_1_at_IRF1_5end | |||
|id=chr5:131826457..131826514,- | |||
|ontology_enrichment_celltype=CL:0000738!3.54e-46!140;CL:0000988!4.40e-39!182;CL:0002031!5.43e-38!124;CL:0000037!1.30e-37!172;CL:0000566!1.30e-37!172;CL:0002087!2.00e-36!119;CL:0002032!1.88e-34!165;CL:0000837!1.88e-34!165;CL:0002057!2.56e-24!42;CL:0000766!7.94e-24!76;CL:0000860!1.88e-21!45;CL:0000557!2.01e-20!71;CL:0000839!1.37e-19!70;CL:0002009!2.16e-18!65;CL:0002194!1.56e-17!63;CL:0000576!1.56e-17!63;CL:0000040!1.56e-17!63;CL:0000559!1.56e-17!63;CL:0000763!2.31e-17!112;CL:0000049!2.31e-17!112;CL:0000838!8.03e-17!52;CL:0000542!8.49e-17!53;CL:0000051!8.49e-17!53;CL:0000134!8.82e-15!358;CL:0002320!1.33e-14!365;CL:0000048!7.53e-11!430;CL:0000084!2.35e-10!25;CL:0000827!2.35e-10!25;CL:0000791!7.96e-10!18;CL:0000789!7.96e-10!18;CL:0002420!7.96e-10!18;CL:0002419!7.96e-10!18;CL:0000790!7.96e-10!18;CL:0000723!1.61e-09!436;CL:0000034!7.98e-09!444;CL:0000219!4.21e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.76e-17;33!CL:0002057;1.76e-17;33!CL:0000576;1.37e-14;48!CL:0000473;5.52e-14;39!CL:0000234;5.52e-14;39!CL:0000766;8.25e-13;69!CL:0002087;1.87e-12;104!CL:0000738;1.91e-10;136!CL:0000084;2.36e-10;25!CL:0000542;4.61e-10;53!CL:0000791;7.93e-10;18!CL:0000789;7.93e-10;18!CL:0002419;7.93e-10;18!CL:0000988;2.93e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.20e-49,136;CL:0000988,4.21e-41,177;CL:0002031,8.83e-41,120;CL:0000037,8.37e-40,168;CL:0002087,3.23e-39,115;CL:0002032,1.41e-36,161;CL:0000837,1.41e-36,161;CL:0000766,1.07e-26,72;CL:0000860,2.56e-24,42;CL:0002057,2.56e-24,42;CL:0000557,4.04e-23,67;CL:0000473,4.49e-23,48;CL:0000234,4.49e-23,48;CL:0000839,3.12e-22,66;CL:0002009,4.66e-21,61;CL:0002194,3.62e-20,59;CL:0000576,3.62e-20,59;CL:0000040,3.62e-20,59;CL:0000559,3.62e-20,59;CL:0000763,4.26e-19,108;CL:0000049,4.26e-19,108;CL:0000838,8.03e-17,52;CL:0000542,8.49e-17,53;CL:0000051,8.49e-17,53;CL:0000134,3.31e-15,354;CL:0002320,5.10e-15,361;CL:0000048,2.73e-11,427;CL:0000084,2.35e-10,25;CL:0000827,2.35e-10,25;CL:0000723,6.30e-10,433;CL:0000791,7.96e-10,18;CL:0000789,7.96e-10,18;CL:0002420,7.96e-10,18;CL:0002419,7.96e-10,18;CL:0000790,7.96e-10,18;CL:0000034,3.27e-09,441;CL:0000219,2.21e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.29e-17;42!CL:0000051;4.61e-10;53!CL:0000790;7.93e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.59e-29!112;UBERON:0002390!1.04e-26!102;UBERON:0003061!1.04e-26!102;UBERON:0002405!1.06e-18!115;UBERON:0002371!1.13e-17!80;UBERON:0001474!1.24e-14!86;UBERON:0002384!4.71e-14!375;UBERON:0003081!1.61e-11!216;UBERON:0004765!4.58e-10!101;UBERON:0001434!4.58e-10!101;UBERON:0000178!1.20e-08!15;UBERON:0000179!1.20e-08!15;UBERON:0000463!1.20e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.20e-08;15!UBERON:0000179;1.20e-08;15!UBERON:0000463;1.20e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.91e-31,108;UBERON:0002390,3.25e-29,98;UBERON:0003061,3.25e-29,98;UBERON:0002405,7.33e-24,93;UBERON:0002371,6.76e-20,76;UBERON:0001474,1.78e-16,82;UBERON:0002384,1.87e-14,371;UBERON:0004765,8.99e-14,90;UBERON:0003081,1.85e-11,203;UBERON:0001434,3.10e-11,100;UBERON:0000178,1.20e-08,15;UBERON:0000179,1.20e-08,15;UBERON:0000463,1.20e-08,15 | |||
|phase1_expression=11.4457378940451,10.4909256706582,21.2841150184916,13.009528785907,19.2193270603734,14.8297549097063,35.4619829435635,49.2741501272928,15.9323233201902,25.5563293961569,57.9174969417115,7.64544802455603,5.80287352102598,16.5846912966462,17.5640609135795,48.4074105445278,44.5993950737743,39.4367448809182,44.8898174887266,72.6414242653049,81.1922751152127,74.915678433263,16.6016872536013,20.3942893358597,21.7188766499009,67.5494506811889,77.5850570301987,72.3352080272712,973.183220924188,679.761864030164,360.257118956509,27.5826367343678,23.7952675834818,24.403764671008,44.6211075342537,69.5207546863491,108.338562114559,1147.32449106952,1418.65142140378,1250.41663706474,93.5966682322884,84.2123531649347,73.151461208109,141.908681048855,167.399043054143,316.087031727724,231.964178831873,241.355550268812,280.284265660069,4125.22121350732,3358.77918400957,3380.27699402744,300.962979283068,284.658745460467,438.781816565667,166.594470495205,129.084608977361,204.723094329472,512.384435828891,266.050163446082,463.519416204305,3403.07586402635,2870.08256951766,3229.50493478622,849.732650704494,503.838079525732,739.290009557747,3454.16664994971,3141.93458348171,2956.59174297075,1223.51239482204,676.157739673169,979.134626742096,345.613648406337,395.869206534911,469.006390002237,284.079108169486,358.9227738912,341.541871731295,405.288121600055,345.31935161762,388.161326749847,151.356770236738,188.963959496697,191.244489580664,265.426198436367,152.150475073685,169.551969786573,181.787340015837,172.683729570901,1091.18126178281,1358.27961901498,1155.99424185069,945.024999340035,837.399793094415,72.1672392283711,822.246839075822,843.401096859708,553.684836805678,135.421061266449,197.834815846589,285.962474663779,311.722765452658,190.177649902991,202.099652527738,268.056012446182,295.717819231397,244.142055397137,322.677241296058,234.652889869446,274.139217643562,198.515113728511,155.552604757001,200.655621067285,296.880887606134,161.465813344032,239.512808501201,327.133328099464,355.998706671441,191.457814008782,220.066207403469,194.842669111917,207.944239446404,159.215344276096,206.135698811371,202.444550497634,188.859439291841,984.445727166368,839.494774564429,824.630155708657,58.5136479153508,45.6076584598473,15.4713699830672,45.9027723528399,42.6137224040506,50.9859746742099,13.5198610998687,185.894520455607,73.9262270223011,51.4412202113148,48.0456277741399,69.2224414005411,50.2727497843708,24.8425576665568,25.9637914923747,34.6518177225542,28.7189194720749,159.550227660274,273.413567352901,141.525308006564,17.2923294409033,14.6239881168041,19.4398680900253,29.3960129800485,29.7844599709033,20.0836170616249,19.854521820997,35.1446792470287,38.4227563701647,44.8525621104658,60.4243975663721,66.1436731975106,50.2767838549229,19.1184801779852,22.6839745406893,19.1101418527931,29.4133478140282,25.6754175501975,18.397996495906,19.9345788509307,19.9689900884144,2552.58668573655,4626.21855128952,30.5265836499774,53.6729707830944,16.58859702806,43.4302113067358,42.4518198708244,29.4374757224636,11.7742296029885,26.6872489324262,37.000132262574,17.4278179823869,37.988409523652,13.0769522490767,44.6504411552548,27.6564443750399,138.24964478194,20.2904049939708,22.818872861778,21.5206099994594,17.8500437938523,14.8923108818681,8.84840082224166,16.3323337003915,16.2141298851534,37.4039327856271,64.1521542932309,70.9656087029458,65.5316180595379,314.754746115512,17.3386197372688,11.8862593878366,6.92660288710457,35.9961649122287,23.2930724807255,54.9871295598144,10.3223286675619,30.4962380671065,32.8878378780594,26.0676238426261,28.8087452241026,20.8166109061647,55.1350755697646,28.1036453060701,15.189869901714,8.96420447483027,34.3309932971996,24.2091233429247,41.0580984319782,30.8858345489454,9.57144933162582,18.8212257464641,38.0723880731695,29.1838349032193,44.4547122852956,4.75697453905422,3.44577397635862,5.92589108634544,7.46359596110667,5.2987378683882,6.93456982244077,128.288616510449,86.8375266560395,132.609524498381,37.1494342425583,15.1594691150613,15.2615772051399,14.1611139665605,12.5325735539411,15.9926260461971,17.4303555273925,13.5244252893325,14.5617812812978,12.1657308377715,16.5441277486948,98.9128309197029,50.4870385692405,32.925920906512,33.8120036186747,41.8291614912042,63.8837690840457,29.5394953340702,76.3731161987346,63.953988042419,26.4214427859729,6.47526683910891,26.9764207818287,6.03173834469785,23.5174650702665,89.9230922656496,32.2379783436669,46.1860294480874,23.9975938298409,28.5303126993047,183.922854447608,225.473944624809,129.753331823996,26.0767451326561,31.7639879975103,39.1485039678962,36.2706610965818,35.0769543001399,15.9347517777521,18.9819804864711,16.871236571844,9.04541079298768,11.6253575405585,13.0350110916172,62.0755679748889,130.928021377667,190.74186629751,157.234869177905,192.14098367495,4.508350494744,8.78573378784039,8.20522130470329,18.8179690624976,4.93571964975953,5.1058319833466,4.85904935471983,51.6924298832113,70.6255311509914,29.1886377567381,22.23473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| |||
|short_description=p1@IRF1 | |||
}} |
Revision as of 07:20, 22 January 2014
Short description: | p1@IRF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IRF1_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_ENST00000245414, ENST00000437654, ENST00000459982, ENST00000463784, NM_002198, uc003kxa.2, uc003kxd.2_5end |
EntrezGene: | IRF1 |
HGNC: | 6116 |
UniProt: | P10914C9J9C5Q6FHN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.91e-31 | 108 |
hematopoietic system | 3.25e-29 | 98 |
blood island | 3.25e-29 | 98 |
immune system | 7.33e-24 | 93 |
bone marrow | 6.76e-20 | 76 |
bone element | 1.78e-16 | 82 |
connective tissue | 1.87e-14 | 371 |
skeletal element | 8.99e-14 | 90 |
lateral plate mesoderm | 1.85e-11 | 203 |
skeletal system | 3.10e-11 | 100 |
blood | 1.20e-08 | 15 |
haemolymphatic fluid | 1.20e-08 | 15 |
organism substance | 1.20e-08 | 15 |