FFCP PHASE1:Hg19::chr5:121411232..121411247,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C421 | |||
|description=CAGE_peak_at_chr5:121411232..121411247,- | |||
|id=chr5:121411232..121411247,- | |||
|ontology_enrichment_celltype=CL:0000055!2.88e-24!180;CL:0000057!8.67e-22!75;CL:0002334!4.28e-14!12;CL:0002620!1.23e-13!23;CL:0000048!9.29e-13!430;CL:0000723!4.19e-12!436;CL:0000034!2.87e-11!444;CL:0000680!1.91e-08!57;CL:0000056!1.91e-08!57;CL:0000355!1.91e-08!57;CL:0000144!9.53e-08!625;CL:0000187!1.08e-07!54;CL:0000393!1.11e-07!60;CL:0000211!1.11e-07!60;CL:0000192!1.24e-07!42;CL:0000514!1.24e-07!42;CL:0000222!3.66e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002334;4.23e-18;12!CL:0000135;5.68e-12;3!CL:0000388;5.68e-12;3!CL:0002579;9.87e-12;3!CL:1000306;2.75e-09;4!CL:0002547;2.75e-09;4!CL:0002195;6.43e-08;2!CL:0002571;6.43e-08;2!CL:0002620;9.30e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,6.50e-18,12;CL:0000057,3.92e-16,76;CL:0000135,3.09e-12,3;CL:0000388,3.09e-12,3;CL:0002579,1.51e-11,3;CL:1000306,2.24e-09,4;CL:0002547,2.24e-09,4;CL:0002195,1.40e-07,2;CL:0002571,1.40e-07,2;CL:0000134,4.03e-07,354;CL:0002620,6.10e-07,23;CL:0002320,8.15e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.34e-09!14;DOID:17!9.79e-07!5;DOID:450!9.79e-07!5;DOID:66!9.79e-07!5;DOID:423!9.79e-07!5;DOID:0080000!9.79e-07!5;DOID:11722!9.79e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.50e-12;3!DOID:127;2.50e-12;3!DOID:0060072;2.40e-09;4!DOID:17;4.33e-07;5!DOID:450;4.33e-07;5!DOID:66;4.33e-07;5!DOID:423;4.33e-07;5!DOID:0080000;4.33e-07;5!DOID:11722;4.33e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.37e-12,3;DOID:127,2.37e-12,3;DOID:0060072,2.31e-09,4;DOID:17,3.06e-07,5;DOID:450,3.06e-07,5;DOID:66,3.06e-07,5;DOID:423,3.06e-07,5;DOID:0080000,3.06e-07,5;DOID:11722,3.06e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.07e-08!45;UBERON:0002416!1.07e-08!45;UBERON:0002097!2.16e-08!40;UBERON:0003688!6.02e-08!6;UBERON:0002358!6.02e-08!6;UBERON:0003684!6.02e-08!6;UBERON:0001178!6.02e-08!6;UBERON:0004290!9.30e-08!70;UBERON:0001134!2.20e-07!61;UBERON:0002036!2.20e-07!61;UBERON:0003082!2.20e-07!61;UBERON:0000486!3.54e-07!82;UBERON:0002385!6.51e-07!63;UBERON:0001015!6.51e-07!63;UBERON:0000383!6.51e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.78e-15;6!UBERON:0002358;1.78e-15;6!UBERON:0003684;1.78e-15;6!UBERON:0001178;1.78e-15;6!UBERON:0004457;2.88e-14;9!UBERON:0000042;2.88e-14;9!UBERON:0007846;5.68e-12;3!UBERON:0000043;5.68e-12;3!UBERON:0007845;5.68e-12;3!UBERON:0004797;2.75e-09;4!UBERON:0000415;2.75e-09;4!UBERON:0007240;2.75e-09;4!UBERON:0005742;2.75e-09;4!UBERON:0005734;2.75e-09;4!UBERON:0004664;2.75e-09;4!UBERON:0004663;2.75e-09;4!UBERON:0005406;6.43e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.78e-15,6;UBERON:0002358,2.78e-15,6;UBERON:0003684,2.78e-15,6;UBERON:0001178,2.78e-15,6;UBERON:0007846,3.09e-12,3;UBERON:0000043,3.09e-12,3;UBERON:0007845,3.09e-12,3;UBERON:0004457,1.78e-10,12;UBERON:0000042,1.78e-10,12;UBERON:0000415,2.24e-09,4;UBERON:0007240,2.24e-09,4;UBERON:0005742,2.24e-09,4;UBERON:0005734,2.24e-09,4;UBERON:0004664,2.24e-09,4;UBERON:0004663,2.24e-09,4;UBERON:0005406,4.51e-08,2;UBERON:0002384,5.54e-07,371 | |||
|phase1_expression=0.54503513781167,4.92431204949261,0.281908808191942,2.00146596706261,2.68176656656373,1.74467704820074,0,0,0,0.491467873003018,0,0,0,0,0,0,0.602694528023977,0,0.487932798790507,0.246242116153576,0,0.313454721478088,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.44575660953827,0,1.44846518960824,0,0.486634870302636,0,0.443458794925128,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,1.49091585508596,0.886413581652058,2.51577443545116,3.72887606973458,2.83734705758686,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0.298897361103602,0.117434498643765,0.485618833104395,0.140450806702248,0,0.245668634623536,0,0,0.741800787835671,0,0,0,0,0.277064115484183,0,0,0,0,3.94657198515496,1.49490172172997,0.847727604638247,1.80054657650641,0.412210116953756,1.8034837803194,0.18611685633159,1.5189869901714,0.779496041289589,1.7670364197088,0.460249493211497,0.161646056818812,3.55009592516614,0.806016785821122,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0.433099343283221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0,0.775630294546667,0,0,0.26593811658487,2.08014873822732,0,0,0.266422179016099,1.14382394926518,0,0,0,1.06617584622764,0.791951872933429,0.301439377059586,0,1.3996218765488,0,0,0,0.239624855491583,0,0,1.59259437334337,0.205476322550383,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0.12269149171914,0,0,1.24782516918484,2.85486382075459,0.946214490203608,0.234282829985426,0,0,1.03473071292505,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.992431231275107,0.920771839728375,4.49056151092918,1.15325234330131,2.55853624533352,2.0911009748669,1.48418066444991,0.925258162815933,1.9531789784444,0.328508624055237,1.03850885836724,1.16210378459959,0,0,0,0.34444334449382,0.364182336013434,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,1.6068392984416,0,0,0,0.137836572484531,0.214840489736547,0.725083469571143,0,0.178064071293475,0,0,0,0,0.929691098594572,10.0739950985805,0.6970372701606,0,0.532306030317022,0,0,0.286249773483982,0.372158369359667,0.316379424718726,0,0,0,0,0,0.359744915166629,0.54907405947211,0.589062011728432,0.202182481573316,0,0,0,0.731140468893853,0,0.136499911407986,0.707027159768564,0,0.551365343546124,0,3.06915619677634,0.578775534266688,0,0.202910376962704,0,0.563391205064483,0.286822704408103,0.294747123039363,0,0,0.844430541190656,1.64647446479951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,1.24415835064723,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.50355303909173,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0,0,2.14882720709979,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0.720599767084807,0,0,0,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0.105600336519406,0,0,0,0,0,4.88699641578341,2.5926644736038,2.28611152076586,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19403842309499,0.233713309847224,2.21922344601045,0.378806010550178,0.50313580350515,0.889811221596536,0.915360273587694,0.756154618816195,0.15543720058278,0.147855149989634,0.159296767163702,0,0.310525913752519,0.414706207840855,1.59505028734797,1.04349012362347,0.751288044986092,3.42724690951916,0.406870733204662,0.363697318405119,0.214821114084977,0.928067519756987,3.18476710958893,0,0.686791410365586,1.6837474438296,0,0,0,0,0.226705925512272,0.231522474323834,0.244736704506468,0.358177682162975,0.308801447160972,0,0.530067437837643,0.38582807654183,0.844712203265363,0,0,0,0,0,0,0,0.327609848846413,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,1.2249819094128,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0,0.20170506870352,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4285549652957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,1.85997509083376,2.77305377178851,4.32626562123789,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0.224263725161227,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:121411232..121411247,- | |||
}} |
Revision as of 07:04, 22 January 2014
Short description: | p@chr5:121411232..121411247, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr5:121411232..121411247, - |
Coexpression cluster: | C421_Smooth_Fibroblast_epithelioid_hepatic_Sertoli_Ewing_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 6.50e-18 | 12 |
fibroblast | 3.92e-16 | 76 |
fibrocyte | 3.09e-12 | 3 |
tendon cell | 3.09e-12 | 3 |
omentum preadipocyte | 1.51e-11 | 3 |
fibroblast of tunica adventitia of artery | 2.24e-09 | 4 |
fibroblast of the aortic adventitia | 2.24e-09 | 4 |
hepatic stem cell | 1.40e-07 | 2 |
hepatic mesenchymal stem cell | 1.40e-07 | 2 |
mesenchymal cell | 4.03e-07 | 354 |
skin fibroblast | 6.10e-07 | 23 |
connective tissue cell | 8.15e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.78e-15 | 6 |
peritoneum | 2.78e-15 | 6 |
abdominal cavity | 2.78e-15 | 6 |
visceral peritoneum | 2.78e-15 | 6 |
dense regular connective tissue | 3.09e-12 | 3 |
tendon | 3.09e-12 | 3 |
regular connective tissue | 3.09e-12 | 3 |
cavity lining | 1.78e-10 | 12 |
serous membrane | 1.78e-10 | 12 |
artery wall | 2.24e-09 | 4 |
tunica adventitia of artery | 2.24e-09 | 4 |
adventitia | 2.24e-09 | 4 |
tunica adventitia of blood vessel | 2.24e-09 | 4 |
aorta tunica adventitia | 2.24e-09 | 4 |
aorta wall | 2.24e-09 | 4 |
perirenal fat | 4.51e-08 | 2 |
connective tissue | 5.54e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.37e-12 | 3 |
leiomyoma | 2.37e-12 | 3 |
benign neoplasm | 2.31e-09 | 4 |
musculoskeletal system disease | 3.06e-07 | 5 |
myotonic disease | 3.06e-07 | 5 |
muscle tissue disease | 3.06e-07 | 5 |
myopathy | 3.06e-07 | 5 |
muscular disease | 3.06e-07 | 5 |
myotonic dystrophy | 3.06e-07 | 5 |