FFCP PHASE1:Hg19::chr5:95067165..95067168,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22836 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18757 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-260bp_to_ENST00000512878_5end | |||
|coexpression_cluster_id=C1085 | |||
|description=CAGE_peak_12_at_RHOBTB3_5end | |||
|id=chr5:95067165..95067168,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.37e-16!180;CL:0000680!1.11e-08!57;CL:0000056!1.11e-08!57;CL:0000355!1.11e-08!57;CL:0000057!2.06e-08!75;CL:0000187!1.34e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002615;7.89e-15;3!CL:0002537;2.50e-09;5!CL:0002539;9.56e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,1.22e-14,3;CL:0002537,4.56e-09,5;CL:0002539,1.43e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!7.58e-11!365;UBERON:0001134!5.69e-08!61;UBERON:0002036!5.69e-08!61;UBERON:0003082!5.69e-08!61;UBERON:0002385!7.36e-08!63;UBERON:0001015!7.36e-08!63;UBERON:0000383!7.36e-08!63;UBERON:0000914!1.05e-07!83;UBERON:0002329!1.05e-07!83;UBERON:0003077!1.05e-07!83;UBERON:0003059!1.05e-07!83;UBERON:0007282!1.05e-07!83;UBERON:0009618!1.05e-07!83;UBERON:0007285!1.05e-07!83;UBERON:0005256!2.37e-07!143;UBERON:0002100!2.44e-07!216;UBERON:0004290!7.97e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.61e-13;6!UBERON:0002358;7.61e-13;6!UBERON:0003684;7.61e-13;6!UBERON:0001178;7.61e-13;6!UBERON:0002081;1.84e-10;2!UBERON:0004457;1.34e-08;9!UBERON:0000042;1.34e-08;9!UBERON:0002385;2.90e-08;31!UBERON:0001015;2.90e-08;31!UBERON:0000383;2.90e-08;31!UBERON:0004237;9.56e-08;10!UBERON:0004695;9.56e-08;10!UBERON:0002111;9.56e-08;10!UBERON:0004178;9.56e-08;10!UBERON:0004151;3.00e-07;3!UBERON:0000305;8.83e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.08e-12,6;UBERON:0002358,1.08e-12,6;UBERON:0003684,1.08e-12,6;UBERON:0001178,1.08e-12,6;UBERON:0002081,1.61e-10,2;UBERON:0010227,1.61e-10,2;UBERON:0004237,1.43e-07,10;UBERON:0004695,1.43e-07,10;UBERON:0002111,1.43e-07,10;UBERON:0004178,1.43e-07,10;UBERON:0004151,2.74e-07,3 | |||
|phase1_expression=0.726713517082227,0.214100523890983,1.12763523276777,1.0007329835313,1.78784437770915,0,0,0,0.261185628199839,0,0,0.218441372130172,0.791300934685361,0.247532705920093,0,1.34465029290355,1.20538905604795,0,0.487932798790507,0.738726348460727,0.816002764977012,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0,0.289693037921647,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0.993943903390637,0.379891534993739,1.05927344650575,0.860509862246441,0,0.560677600142307,0,1.2333377420858,0.311211035399766,0.404132016209064,0.163461903113459,0.454072282934794,0.576175924479999,0.468642863667593,0,0.570471821544449,0,0.117434498643765,0.161872944368132,0,0,0,0.206651562351531,2.37600571456411,0.494533858557114,0,0,0,0.125118519871964,0.277064115484183,0.438977620880838,0.612975591598039,2.25357088359895,0.680593098960126,0,0.640672166455702,0.635795703478686,0,0.515262646192195,0.257640540045629,0.18611685633159,0.337552664482532,0.194874010322397,0.252433774244115,0.184099797284599,0.646584227275248,0.355009592516614,0.201504196455281,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,3.71494342425583,0,0,0,0.241011029883482,0,0,0,0,0.392442930250692,0.38474715694639,0,0,0,1.47008711385542,1.26755034821831,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,2.46331618947972,1.49682337822484,0.621984346622316,0.720599767084807,0.25248486685276,0.063497894292169,0,0,0,0.102827492703324,0,0.571652865261156,0.336393253036082,0.87192013766656,0.1466765716419,0.258543431515556,0,0,1.06375246633948,2.08014873822732,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.434343920002738,0.205476322550383,1.96967059563885,0,0.197030760201927,0,0,0.76228387266739,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0.623912584592421,1.07057393278297,1.57702415033935,0.35142424497814,0.902838299183157,0,0,0,0.184369168541703,0.60818530127658,0,0,0,0,0,0,0,0.30239029332968,0.992431231275107,0,0,1.28139149255701,0.511707249066704,0.804269605718038,2.96836132889982,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0.120859449591622,0,0.0920809889358963,2.06666006696292,0.546273504020151,0.393373244878272,0.451199612907412,0.0770153371044148,0,0,0,0,0,0.431831832204279,0,0,0,0.254876273045038,0,0.447749509444357,0,0,0.256450125116389,0,0,0.309123034943167,0.640986253728404,0.660075999364704,0,0,0,1.7400729292582,0.154048617114644,1.07452572308291,0.413509717453592,0.214840489736547,0.145016693914229,0.596586391912706,1.69160867728801,0,0,0,0.2023155617111,0,1.25924938732256,0,0,1.06461206063404,0,0.55597265731176,0.143124886741991,0.744316738719335,0.316379424718726,0.953150969619124,0.255897791311334,0.42793898803392,0,0,0.719489830333259,0.823611089208164,0.471249609382746,0.202182481573316,0,0.842516912477962,0.48763373908959,0.243713489631284,0,0.409499734223957,1.69686518344455,0,0.551365343546124,0,0.876901770507525,0,0,0.811641507850816,0,0.281695602532241,0,0.0982490410131212,0.35667105148125,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0.270455678475983,0.33307196799782,0,0,0.439524537815682,0,0,0.284136146806413,0,1.18785872333055,0,0,0.140669416410513,0.222617410045812,0,0,0,0,0,0,0.123084805461069,0,0.539210106883961,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,1.5625665665114,0,0,0.227586896570999,0.254253650292766,0.236387681767936,0,0,0,0.885741385813839,0.482385754501632,0,0,0,0.438770794307945,0.10893846351899,0,0,3.53220373125704,0,0,0,0,0.274792780205587,0,0,0.156980256395025,0,0,0,0.671286347903371,0.37950746544837,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.471807930864739,0,0.468528891450678,0,0,0,0,0,0,0.505492637027904,0.150323419414493,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0,0.290268993867255,0.0730893170861856,0.246346371159628,0.290967049465258,0,0,0,0.596143835108969,0.379864775735272,0.195551382734803,0.160317640503067,0.426905989478705,0.39961921916426,0,0,0,0,0,0.235694034616795,0.271808412147228,0,0.713987523454252,0.866851769704557,0,0.136905378891993,0,0.429765441419957,0,0,0,1.43574604915363,0.599037001496973,0.429226048136571,0,0.335917362433631,0,0,0,0,0,0.0984274815147488,0.169346664131569,0.795229689809303,0,0,0,0,0,0,0.607495566580247,0,0,0.0524545881349981,0.211200673038813,0.179287339332845,0,1.42939065274673,0,0,0,0.864221491201268,0.979762080328227,0,0.082092520749339,0.170388021785422,7.3652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| |||
|short_description=p12@RHOBTB3 | |||
}} |
Revision as of 06:33, 22 January 2014
Short description: | p12@RHOBTB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_RHOBTB3_5end |
Coexpression cluster: | C1085_liposarcoma_placenta_Olfactory_amniotic_Hair_mesothelioma_Smooth |
Association with transcript: | -260bp_to_ENST00000512878_5end |
EntrezGene: | RHOBTB3 |
HGNC: | 18757 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 1.22e-14 | 3 |
amnion mesenchymal stem cell | 4.56e-09 | 5 |
aortic smooth muscle cell | 1.43e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.08e-12 | 6 |
peritoneum | 1.08e-12 | 6 |
abdominal cavity | 1.08e-12 | 6 |
visceral peritoneum | 1.08e-12 | 6 |
cardiac atrium | 1.61e-10 | 2 |
future cardiac atrium | 1.61e-10 | 2 |
blood vessel smooth muscle | 1.43e-07 | 10 |
arterial system smooth muscle | 1.43e-07 | 10 |
artery smooth muscle tissue | 1.43e-07 | 10 |
aorta smooth muscle tissue | 1.43e-07 | 10 |
cardiac chamber | 2.74e-07 | 3 |