FFCP PHASE1:Hg19::chr5:82836392..82836413,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C456 | |||
|description=CAGE_peak_at_chr5:82836392..82836413,+ | |||
|id=chr5:82836392..82836413,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.31e-24!42;CL:0000860!1.65e-21!45;CL:0000034!2.64e-11!444;CL:0000048!2.69e-11!430;CL:0002194!5.23e-11!63;CL:0000576!5.23e-11!63;CL:0000040!5.23e-11!63;CL:0000559!5.23e-11!63;CL:0000723!1.08e-10!436;CL:0002009!3.21e-10!65;CL:0000839!1.71e-08!70;CL:0000057!2.09e-08!75;CL:0000557!3.47e-08!71;CL:0000055!3.69e-08!180;CL:0000766!6.42e-08!76;CL:0002334!7.88e-08!12;CL:0000134!1.40e-07!358;CL:0002320!2.67e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.94e-40;33!CL:0002057;1.94e-40;33!CL:0000473;4.09e-27;39!CL:0000234;4.09e-27;39!CL:0000576;2.27e-21;48!CL:0000766;4.73e-11;69!CL:0002334;2.15e-09;12!CL:1000306;1.34e-08;4!CL:0002547;1.34e-08;4!CL:0002580;6.71e-07;3!CL:0002579;6.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.08e-39,42;CL:0002057,2.08e-39,42;CL:0000473,3.70e-33,48;CL:0000234,3.70e-33,48;CL:0002194,1.84e-24,59;CL:0000576,1.84e-24,59;CL:0000040,1.84e-24,59;CL:0000559,1.84e-24,59;CL:0002009,2.40e-23,61;CL:0000839,7.39e-21,66;CL:0000557,2.09e-20,67;CL:0000766,1.15e-19,72;CL:0000134,3.48e-15,354;CL:0002320,1.77e-14,361;CL:0000048,4.45e-14,427;CL:0000723,1.45e-13,433;CL:0000034,1.87e-13,441;CL:0000219,1.49e-12,386;CL:0000763,4.74e-10,108;CL:0000049,4.74e-10,108;CL:0002334,3.26e-09,12;CL:0002087,6.47e-09,115;CL:1000306,1.09e-08,4;CL:0002547,1.09e-08,4;CL:0002031,1.47e-07,120;CL:0002579,6.20e-07,3;CL:0000738,7.30e-07,136;CL:0002580,7.67e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;9.27e-29;42 | |||
|ontology_enrichment_disease=DOID:2394!2.24e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.84e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.96e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002204!4.88e-09!167;UBERON:0002371!1.34e-07!80;UBERON:0002384!1.42e-07!375;UBERON:0000468!3.09e-07!659;UBERON:0003081!5.19e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.97e-09;9!UBERON:0000042;2.97e-09;9!UBERON:0004797;1.34e-08;4!UBERON:0000415;1.34e-08;4!UBERON:0007240;1.34e-08;4!UBERON:0005742;1.34e-08;4!UBERON:0005734;1.34e-08;4!UBERON:0004664;1.34e-08;4!UBERON:0004663;1.34e-08;4!UBERON:0003688;9.20e-08;6!UBERON:0002358;9.20e-08;6!UBERON:0003684;9.20e-08;6!UBERON:0001178;9.20e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.40e-19,76;UBERON:0001474,1.27e-18,82;UBERON:0004765,4.52e-16,90;UBERON:0001434,1.81e-15,100;UBERON:0002390,6.70e-15,98;UBERON:0003061,6.70e-15,98;UBERON:0003081,7.63e-15,203;UBERON:0002405,3.22e-14,93;UBERON:0002384,3.59e-14,371;UBERON:0000926,1.78e-13,315;UBERON:0004120,1.78e-13,315;UBERON:0006603,1.78e-13,315;UBERON:0002193,1.33e-12,108;UBERON:0002204,2.39e-11,167;UBERON:0000415,1.09e-08,4;UBERON:0007240,1.09e-08,4;UBERON:0005742,1.09e-08,4;UBERON:0005734,1.09e-08,4;UBERON:0004664,1.09e-08,4;UBERON:0004663,1.09e-08,4;UBERON:0003688,8.96e-08,6;UBERON:0002358,8.96e-08,6;UBERON:0003684,8.96e-08,6;UBERON:0001178,8.96e-08,6;UBERON:0004797,7.79e-07,7 | |||
|phase1_expression=1.81678379270557,2.5692062866918,1.9733616573436,1.0007329835313,0.446961094427288,3.48935409640147,0,0,0,0,0,0,0,0,0,2.01697543935533,1.20538905604795,0,0.975865597581014,0,0,0,0.286235987131057,0.136874425072884,0.376627918784408,0,0,0,0,0.383829398097213,1.54816123316076,0,0,0,0,0,0,0.553995408531877,2.4065333696417,2.82114131930607,0,0,0,3.19876125315042,0.377875943688809,1.94067248950253,3.71886459049095,1.6446715520873,1.54853185447552,4.31538588483226,3.58624989140741,1.6553756092201,5.86067657252252,0.645484683583826,5.41705946377367,5.27078550719293,2.45615535052061,2.24723484445085,4.59125838556354,1.60464513538047,2.55734850319616,4.61791820261403,2.39356389145958,0.852449501065388,8.9964863974861,3.40431134814684,1.24564449799115,11.5574386018102,5.73631210262222,1.73751075764093,3.02699751316684,1.84138817993782,2.53169909952708,0.633765858935825,0.425208599930087,0.209658645508376,3.25753030324836,2.55300717830561,3.2145117339416,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.12786256184353,1.80719576192283,0.50133791063589,0.724232594804119,0,0.486634870302636,0.378139268656271,0.665188192387692,0.966182642624386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,1.77282716330412,5.03154887090231,7.74458876021797,4.25602058638028,0,1.06748995729705,0.98667019366864,1.8672662123986,0.134710672069688,0.490385709340376,0,0,0,0,0,0,0.23486899728753,0,0.140450806702248,0,0.122834317311768,0,0,0.494533858557114,0,0,0.168336113954066,0.375355559615893,0,0,0.612975591598039,0.150238058906597,0,2.51145489964407,0.427114777637135,0.211931901159562,0.600182192168805,0.412210116953756,0.257640540045629,0.558350568994769,3.54430297706659,0.974370051611986,1.7670364197088,0.368199594569197,0.161646056818812,3.55009592516614,0.604512589365842,0,0,0,0,0.243947412259191,0.265059536642971,0.464775771478074,0.518305275076852,1.00928340350251,0.36497735907583,0,1.28648187638577,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0,1.52631302506568,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,2.32689088364,0,1.690605505112,1.32969058292435,0,0,0,0,0.142977993658148,0.542621605391443,0,0.325736184293735,0,0,0.301439377059586,0.871533458600294,0.299918973546171,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0,0,0,0,0,0,1.54657762555539,0.167516265334349,0.637938751653163,0,0,0,0.36807447515742,0.500170521059677,0,0.415941723061614,0.892144943985809,0.946214490203608,0.468565659970853,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,1.50999940573032,0.853820462427555,0,0,0,2.23297027036899,4.14347327877769,4.49056151092918,2.81906128362542,3.07024349440022,6.11244900345709,0,0.925258162815933,2.13074070375753,0.98552587216571,1.03850885836724,0.929683027679674,0.120859449591622,0,0.184161977871793,0.229628896329213,0,0,0,0.308061348417659,0,0,0.949964660035881,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,3.21367859688319,0.290012154876366,0,0.460511024178389,0,0.322260734604821,0.290033387828457,0.511359764496605,0.356128142586949,0.495854746082934,0,0.255225424989168,0,0,6.2962469366128,0.6970372701606,0,0,0,1.29726953372744,0.143124886741991,0,0.316379424718726,0,0,0,0.318203247925937,0,0.719489830333259,0.274537029736055,0.589062011728432,0,0,0.842516912477962,0,0.487426979262569,1.05650146756755,0,0.707027159768564,1.13008116620243,0,1.99031692572366,1.31535265576129,0,0,0.202910376962704,0.6196469961995,0.281695602532241,0,0.0982490410131212,0,0,1.05553817648832,2.30506425071931,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,1.08006287447623,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.844016498463076,0.556543525114529,0.494411622680279,0,0.996239941255349,0,0,0,0,1.55519793830904,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0,0,0.520874984799877,0,0.361789315876224,0,0.110579259931225,0,0.219385397153973,0,0,0,0.455768223388005,0,0,0,0.31900115973192,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0.134802265961354,0.802577647298789,0.468528891450678,0,0,0,0,0,1.83643656978294,0.63186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.873633341210151,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0.0633107959558787,0,0,0,0,0,0,0,0.288109595976299,0,0,0,0,0,0.288950589901519,0,0.547621515567972,0,0,0,1.11712960508902,0,0.717873024576814,0.199679000498991,0,0,0.0671834724867263,0.720599767084807,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0.544813624446302,0.482259445395058,0.687697182986169,0.83088067605837,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0.71469532637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| |||
|short_description=p@chr5:82836392..82836413,+ | |||
}} |
Revision as of 06:18, 22 January 2014
Short description: | p@chr5:82836392..82836413, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:82836392..82836413, + |
Coexpression cluster: | C456_Fibroblast_Smooth_CD14_Preadipocyte_Lens_mesenchymal_serous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.08e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.08e-39 | 42 |
defensive cell | 3.70e-33 | 48 |
phagocyte | 3.70e-33 | 48 |
monopoietic cell | 1.84e-24 | 59 |
monocyte | 1.84e-24 | 59 |
monoblast | 1.84e-24 | 59 |
promonocyte | 1.84e-24 | 59 |
macrophage dendritic cell progenitor | 2.40e-23 | 61 |
myeloid lineage restricted progenitor cell | 7.39e-21 | 66 |
granulocyte monocyte progenitor cell | 2.09e-20 | 67 |
myeloid leukocyte | 1.15e-19 | 72 |
mesenchymal cell | 3.48e-15 | 354 |
connective tissue cell | 1.77e-14 | 361 |
multi fate stem cell | 4.45e-14 | 427 |
somatic stem cell | 1.45e-13 | 433 |
stem cell | 1.87e-13 | 441 |
motile cell | 1.49e-12 | 386 |
myeloid cell | 4.74e-10 | 108 |
common myeloid progenitor | 4.74e-10 | 108 |
preadipocyte | 3.26e-09 | 12 |
nongranular leukocyte | 6.47e-09 | 115 |
fibroblast of tunica adventitia of artery | 1.09e-08 | 4 |
fibroblast of the aortic adventitia | 1.09e-08 | 4 |
hematopoietic lineage restricted progenitor cell | 1.47e-07 | 120 |
omentum preadipocyte | 6.20e-07 | 3 |
leukocyte | 7.30e-07 | 136 |
preadipocyte of the breast | 7.67e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.40e-19 | 76 |
bone element | 1.27e-18 | 82 |
skeletal element | 4.52e-16 | 90 |
skeletal system | 1.81e-15 | 100 |
hematopoietic system | 6.70e-15 | 98 |
blood island | 6.70e-15 | 98 |
lateral plate mesoderm | 7.63e-15 | 203 |
immune system | 3.22e-14 | 93 |
connective tissue | 3.59e-14 | 371 |
mesoderm | 1.78e-13 | 315 |
mesoderm-derived structure | 1.78e-13 | 315 |
presumptive mesoderm | 1.78e-13 | 315 |
hemolymphoid system | 1.33e-12 | 108 |
musculoskeletal system | 2.39e-11 | 167 |
artery wall | 1.09e-08 | 4 |
tunica adventitia of artery | 1.09e-08 | 4 |
adventitia | 1.09e-08 | 4 |
tunica adventitia of blood vessel | 1.09e-08 | 4 |
aorta tunica adventitia | 1.09e-08 | 4 |
aorta wall | 1.09e-08 | 4 |
omentum | 8.96e-08 | 6 |
peritoneum | 8.96e-08 | 6 |
abdominal cavity | 8.96e-08 | 6 |
visceral peritoneum | 8.96e-08 | 6 |
blood vessel layer | 7.79e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.96e-07 | 14 |