FFCP PHASE1:Hg19::chr5:35857007..35857038,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3575 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6024 | |||
|TSSclassifier=strong | |||
|UniProt=D6RDM4 | |||
|association_with_transcript=13bp_to_ENST00000511982_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_2_at_IL7R_5end | |||
|id=chr5:35857007..35857038,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.91e-13!140;CL:0000791!2.40e-11!18;CL:0000789!2.40e-11!18;CL:0002420!2.40e-11!18;CL:0002419!2.40e-11!18;CL:0000790!2.40e-11!18;CL:0002087!1.74e-10!119;CL:0002031!4.81e-09!124;CL:0000625!1.19e-08!11;CL:0000084!2.59e-07!25;CL:0000827!2.59e-07!25;CL:0000037!7.53e-07!172;CL:0000566!7.53e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.18e-12;18!CL:0000789;6.18e-12;18!CL:0002419;6.18e-12;18!CL:0000625;3.37e-09;11!CL:0000084;1.90e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.18e-14,136;CL:0002087,5.13e-12,115;CL:0000791,6.45e-12,18;CL:0000789,6.45e-12,18;CL:0002420,6.45e-12,18;CL:0002419,6.45e-12,18;CL:0000790,6.45e-12,18;CL:0002031,5.53e-10,120;CL:0000625,3.47e-09,11;CL:0000037,5.71e-08,168;CL:0000084,2.39e-07,25;CL:0000827,2.39e-07,25;CL:0000766,2.76e-07,72;CL:0000134,5.91e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000790;6.18e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.27e-08!112;UBERON:0002390!1.30e-07!102;UBERON:0003061!1.30e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.71e-09,108;UBERON:0002390,5.51e-09,98;UBERON:0003061,5.51e-09,98 | |||
|phase1_expression=1.63510541343501,4.71021152560163,1.26858963686374,1.0007329835313,0,0.872338524100369,0,0,0,4.91467873003018,1.39560233594486,0,0,0.123766352960047,0.331397375727916,3.36162573225888,1.80808358407193,2.92124036154949,0.487932798790507,0.492484232307152,0.408001382488506,0,0.572471974262113,1.09499540058307,0.251085279189606,9.62808912424186,7.88165658719479,9.76013688289623,17.7013924582007,66.0186564727206,11.3015770020735,0,0.6024118375565,0,11.2327440841437,34.404954261956,2.05520307534393,17.7278530730201,21.8593447742454,19.096956622995,21.7198010012727,62.1875838756441,19.0605920049298,4.21654892460738,5.29026321164333,5.33684934613196,14.1781712512468,14.3908760807639,10.2203102395384,7.19230980805376,5.12321413058201,5.43909128743746,13.1003358679915,21.3009945582663,6.77132432971709,8.094420600332,21.5595858545698,15.7306439111559,18.0589496498833,23.1068899494787,8.31138263538754,3.62836430205388,8.7764009353518,3.83602275479425,82.4194237705179,70.3557678617013,64.7735138955398,3.51748131359441,7.30076085788282,5.2125322729228,85.361329871305,76.970025921401,53.7986058649504,0.211255286311942,0,0,0.112328631146495,0,0,0,0,0,0,3.27683166757279,0.889509253863555,3.41384178053206,4.00395987036012,0.574752439954483,0,0,2.27685187643779,4.11066032559657,2.29363936875137,0,23.5413596452245,1.84368859342554,200.447255745996,185.894090780355,186.891762590554,2.17342444007882,361.121871430018,433.678190053016,274.705687055155,79.3242453022436,220.954430606128,289.323266326209,227.746049426378,6.78883994546078,8.06367954871245,64.6240965092447,68.2584543931045,138.23607189562,774.945579084928,876.19621199381,541.49401330978,109.570134388547,403.914400256425,443.623032118075,625.97071805625,490.909303473433,397.160906852415,395.388050490524,467.987470093718,553.54209324286,559.689654954509,456.032987436777,323.524430786892,134.270090987672,93.6040685242276,102.680502352904,0,0,0.12786256184353,40.842624219456,5.51471701699479,18.3955079080246,0,2.91980922181582,11.15510842536,3.54767035940102,2.10803485663503,8.12070268085818,0,0,4.21911611751088,8.18409765306556,8.64226743372624,3.57735936458013,2.28797964312051,4.82894751728434,0,0,1.04142150482278,0.56530794192401,2.93649605346934,2.47606237746061,0.626984899610432,0,2.13459757612026,0.33472061276467,2.81980521976403,3.80136052859256,0.488124115096339,1.83831540172934,4.0507097394088,1.25019619597712,0.44905874525234,0.225222960966644,4.5994991239765,0.949265659568129,1.28241220751285,10.5424333948851,38.7780264148325,0.436094052142534,3.97577561356255,0.759783069987479,4.10468460520978,0.286836620748814,2.83734705758686,0,0,0.24666754841716,1.24484414159907,2.2900814251847,1.47115712802113,0.151357427644931,0,0.234321431833797,0,0.570471821544449,0,0.704606991862589,1.45685649931318,0.702254033511242,3.87892925384297,2.94802361548243,0.516628905878827,10.6920257155385,3.21447008062124,6.37112953356618,2.87447256726495,0.505008341862199,0.875829639103749,11.6366928503357,11.4134181429018,23.5995602765245,2.85452311922534,1.70148274740032,148.714007986067,41.6436908196207,30.7301256681365,38.1115692027191,25.0417646049407,62.0913701509966,42.8068769562657,30.7172924679105,23.6771922541713,41.3991389760348,43.355502260523,0.80823028409406,82.3622254638545,49.9730407209096,28.8253006927829,5.02478218224572,23.7289124914026,6.88331028933609,0,0,0.232387885739037,0.207322110030741,0,0,6.25798129319264,9.64861407289328,8.28809528114883,3.25057549622385,0,1.8929088006375,1.51726221070292,1.68707720918437,2.42646740011267,2.17879444092406,0.71181185733329,1.8876383142423,1.37355025587742,1.92373578473195,0,1.40241773803446,0.4115740113314,0,0,1.96565443335525,4.13552934676983,121.402352339029,0,6.00487336044839,1.86575485194663,0,0.402115889646523,0.833296006426766,0,0,14.4331342025273,29.4463228636695,0.821860859650752,2.88732895522148,1.38895653772983,1.52203321787679,0,0,38.1636359435466,15.4442814991897,23.0378301547529,15.9347517777521,12.2626953585167,15.7370357939049,0.806026704325635,1.16253575405585,1.15014803749563,0.985326475791887,0,4.76854665743776,4.03535869567492,3.66103056936502,0.126995788584338,0,0,0,1.64523988325318,0.300343057843917,0,0.560655421726804,0.87192013766656,4.5469737208989,7.62703122970889,0,4.22651376278,1.59562869950922,5.2003718455683,1.02882949704857,0,1.5985330740966,15.4416233150799,0,1.64648067356154,10.7492940816933,7.10783897485092,8.71147060226772,0.602878754119172,0,0.299918973546171,0,1.50677127429638,0,0.958499421966331,0,0,26.7845417335022,10.0683398049688,5.37182889719687,0.224170287987055,93.5896110959154,80.4290854226,57.4976802533273,0.76228387266739,0,0,1.34013012267479,0.637938751653163,3.74503511973591,0,14.0901274568252,0.49076596687656,0.500170521059677,0.542530047399471,4.78332981520856,29.9760701179232,16.874158408631,14.0569697991256,1.20378439891088,0,0,3.98535359121262,0.737476674166813,13.9882619293613,0.587403472388222,0,211.110154671468,137.841374323096,86.8762320520037,0,0,0.3023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| |||
|short_description=p2@IL7R | |||
}} |
Revision as of 05:02, 22 January 2014
Short description: | p2@IL7R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IL7R_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 13bp_to_ENST00000511982_5end |
EntrezGene: | IL7R |
HGNC: | 6024 |
UniProt: | D6RDM4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.18e-14 | 136 |
nongranular leukocyte | 5.13e-12 | 115 |
mature alpha-beta T cell | 6.45e-12 | 18 |
alpha-beta T cell | 6.45e-12 | 18 |
immature T cell | 6.45e-12 | 18 |
mature T cell | 6.45e-12 | 18 |
immature alpha-beta T cell | 6.45e-12 | 18 |
hematopoietic lineage restricted progenitor cell | 5.53e-10 | 120 |
CD8-positive, alpha-beta T cell | 3.47e-09 | 11 |
hematopoietic stem cell | 5.71e-08 | 168 |
T cell | 2.39e-07 | 25 |
pro-T cell | 2.39e-07 | 25 |
myeloid leukocyte | 2.76e-07 | 72 |
mesenchymal cell | 5.91e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.71e-09 | 108 |
hematopoietic system | 5.51e-09 | 98 |
blood island | 5.51e-09 | 98 |