FFCP PHASE1:Hg19::chr5:30198094..30198099,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C97 | |||
|description=CAGE_peak_at_chr5:30198094..30198099,+ | |||
|id=chr5:30198094..30198099,+ | |||
|ontology_enrichment_celltype=CL:0002615!4.64e-10!3;CL:0002564!1.75e-09!3;CL:0002617!2.40e-07!2;CL:0000136!6.27e-07!15;CL:0002602!8.38e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.77e-11;12!CL:0000319;1.11e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.09e-11,12;CL:0000319,1.12e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.10e-12;11!UBERON:0009497;3.40e-10;13!UBERON:0001041;2.86e-09;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;1.11e-09;1!DOID:4960;3.67e-09;1!DOID:0070004;3.67e-09;1!DOID:5662;3.67e-09;1!DOID:5409;4.42e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.12e-09,1;DOID:4960,3.25e-09,1;DOID:0070004,3.25e-09,1;DOID:5409,3.84e-09,4;DOID:5662,4.15e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002242!1.75e-09!3;UBERON:0003068!1.75e-09!3;UBERON:0002328!1.75e-09!3;UBERON:0004880!1.75e-09!3;UBERON:0009568!8.38e-07!2;UBERON:0002216!8.38e-07!2;UBERON:0002209!8.38e-07!2;UBERON:0002213!8.38e-07!2;UBERON:0004267!8.38e-07!2;UBERON:0006444!8.38e-07!2;UBERON:0001995!8.38e-07!2;UBERON:0004715!8.38e-07!2;UBERON:0001468!8.38e-07!2;UBERON:0001130!8.38e-07!2;UBERON:0001066!8.38e-07!2;UBERON:0002368!8.47e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.55e-10;19!UBERON:0006925;1.55e-10;19!UBERON:0001282;8.67e-10;1!UBERON:0009842;8.67e-10;1!UBERON:0003704;8.67e-10;1!UBERON:0001171;8.67e-10;1!UBERON:0001172;8.67e-10;1!UBERON:0002423;5.84e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.65e-10,19;UBERON:0006925,1.65e-10,19;UBERON:0008836,1.65e-10,19;UBERON:0001282,8.68e-10,1;UBERON:0009842,8.68e-10,1;UBERON:0003704,8.68e-10,1;UBERON:0001171,8.68e-10,1;UBERON:0001172,8.68e-10,1;UBERON:0008835,4.75e-09,22;UBERON:0003894,4.75e-09,22;UBERON:0009854,1.20e-08,23;UBERON:0007499,6.11e-08,25;UBERON:0009497,6.11e-08,25;UBERON:0000015,6.11e-08,25;UBERON:0002423,6.11e-08,25;UBERON:0006235,6.11e-08,25;UBERON:0004161,6.11e-08,25;UBERON:0009856,1.26e-07,26 | |||
|phase1_expression=0.363356758541113,4.92431204949261,0.704772020479856,1.0007329835313,0.893922188854576,0,0,0,0,0,0,0,0,0.123766352960047,0.662794751455832,0,0,0,0,0,0,0,0,0,0,1.60468152070698,0.492603536699674,1.18066171970519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.927443239800615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,57.3128540910416,0,0,0,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0.503464760927528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0.970722711091971,0,0,0,0,0,0,0,0,0,0,1.80784592624426,0,0,0,0,0.561111741760736,0,0,0,0,1.37275998289572,0,0,0,0,0.104602846312333,5.50790375236138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33080918664895,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,2.19828350517124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612691153526923,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,7.6189601713653,0,0,0,1.37771983728653,0,1.28874165176289,0,0,0,0,0,0,0,0,0,4.46915934378595,0,0,0,0,5.2061731150044,0,0,0,0,0.252071696221718,0.138314504928436,0,0,0,0.471878893390961,0,0,0,0,0,0,0,2.34454203369928,0,0.49131575253029,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,1.20041606606193,0,0,0,0,0,0,0,0,0,0,31.3782028935521,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54596118010839,0,0,217.084569048877,0,0,11.2876151126765,0,0.235676547101626,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0.112131862580613,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:30198094..30198099,+ | |||
}} |
Revision as of 04:53, 22 January 2014
Short description: | p@chr5:30198094..30198099, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:30198094..30198099, + |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.09e-11 | 12 |
mucus secreting cell | 1.12e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
liver | 1.65e-10 | 19 |
digestive gland | 1.65e-10 | 19 |
liver bud | 1.65e-10 | 19 |
intralobular bile duct | 8.68e-10 | 1 |
acinus | 8.68e-10 | 1 |
intrahepatic bile duct | 8.68e-10 | 1 |
portal lobule | 8.68e-10 | 1 |
hepatic acinus | 8.68e-10 | 1 |
hepatic diverticulum | 4.75e-09 | 22 |
liver primordium | 4.75e-09 | 22 |
digestive tract diverticulum | 1.20e-08 | 23 |
epithelial sac | 6.11e-08 | 25 |
epithelium of foregut-midgut junction | 6.11e-08 | 25 |
anatomical boundary | 6.11e-08 | 25 |
hepatobiliary system | 6.11e-08 | 25 |
foregut-midgut junction | 6.11e-08 | 25 |
septum transversum | 6.11e-08 | 25 |
sac | 1.26e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.12e-09 | 1 |
bone marrow cancer | 3.25e-09 | 1 |
myeloma | 3.25e-09 | 1 |
lung small cell carcinoma | 3.84e-09 | 4 |
pleomorphic carcinoma | 4.15e-09 | 1 |