FFCP PHASE1:Hg19::chr4:185772359..185772424,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100500818 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=38954 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-95bp_to_NR_037510_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_MIR3945_5end | |||
|id=chr4:185772359..185772424,- | |||
|ontology_enrichment_celltype=CL:0002057!7.54e-63!42;CL:0000860!1.33e-57!45;CL:0000738!5.63e-51!140;CL:0000766!1.20e-46!76;CL:0002087!2.43e-43!119;CL:0002194!7.72e-40!63;CL:0000576!7.72e-40!63;CL:0000040!7.72e-40!63;CL:0000559!7.72e-40!63;CL:0000988!2.43e-38!182;CL:0002009!3.74e-38!65;CL:0000037!4.04e-38!172;CL:0000566!4.04e-38!172;CL:0002031!6.81e-36!124;CL:0000839!2.30e-34!70;CL:0000557!1.13e-33!71;CL:0002032!9.84e-33!165;CL:0000837!9.84e-33!165;CL:0000763!3.44e-27!112;CL:0000049!3.44e-27!112;CL:0002393!4.86e-14!9;CL:0002397!4.86e-14!9;CL:0000094!1.14e-13!8;CL:0000081!1.38e-11!11;CL:0000134!1.99e-09!358;CL:0000080!2.18e-09!6;CL:0002320!7.59e-09!365;CL:0000219!7.37e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.63e-76;33!CL:0002057;2.63e-76;33!CL:0000576;1.19e-53;48!CL:0000473;1.15e-52;39!CL:0000234;1.15e-52;39!CL:0000766;5.93e-38;69!CL:0000094;3.68e-22;8!CL:0002087;4.55e-18;104!CL:0002393;7.16e-17;6!CL:0002397;7.16e-17;6!CL:0000763;1.29e-16;100!CL:0000081;1.11e-15;11!CL:0000738;3.47e-13;136!CL:0000775;9.34e-10;3!CL:0000988;2.99e-09;177!CL:0000226;4.83e-09;3!CL:0000842;4.83e-09;3!CL:0000767;1.47e-08;3!CL:0000784;4.97e-08;3!CL:0000771;2.80e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.16e-101,42;CL:0002057,1.16e-101,42;CL:0000473,1.77e-87,48;CL:0000234,1.77e-87,48;CL:0000766,5.69e-84,72;CL:0002194,3.88e-71,59;CL:0000576,3.88e-71,59;CL:0000040,3.88e-71,59;CL:0000559,3.88e-71,59;CL:0002009,1.86e-68,61;CL:0000738,5.57e-63,136;CL:0000839,1.85e-62,66;CL:0000557,2.30e-61,67;CL:0000763,9.36e-52,108;CL:0000049,9.36e-52,108;CL:0002087,8.51e-51,115;CL:0000988,2.03e-48,177;CL:0000037,3.64e-48,168;CL:0002031,1.22e-41,120;CL:0002032,1.93e-41,161;CL:0000837,1.93e-41,161;CL:0000094,3.53e-22,8;CL:0002393,2.00e-18,9;CL:0002397,2.00e-18,9;CL:0000134,8.99e-16,354;CL:0000081,1.08e-15,11;CL:0002320,3.56e-15,361;CL:0000219,4.45e-13,386;CL:0000034,4.85e-11,441;CL:0000048,1.58e-10,427;CL:0000723,3.53e-10,433;CL:0000775,9.35e-10,3;CL:0000226,4.58e-09,3;CL:0000842,4.58e-09,3;CL:0000767,1.41e-08,3;CL:0000784,4.78e-08,3;CL:0000771,2.81e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;3.14e-73;42!CL:0000049;2.55e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.31e-50!102;UBERON:0003061!3.31e-50!102;UBERON:0002193!7.99e-44!112;UBERON:0002371!2.91e-31!80;UBERON:0001474!5.09e-28!86;UBERON:0004765!9.67e-23!101;UBERON:0001434!9.67e-23!101;UBERON:0000178!4.48e-21!15;UBERON:0000179!4.48e-21!15;UBERON:0000463!4.48e-21!15;UBERON:0002405!5.54e-21!115;UBERON:0003081!4.34e-18!216;UBERON:0002204!1.29e-10!167;UBERON:0002384!4.59e-08!375;UBERON:0007023!2.07e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.70e-30;15!UBERON:0000179;1.70e-30;15!UBERON:0000463;1.70e-30;15!UBERON:0002390;1.05e-13;32!UBERON:0002193;4.77e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.57e-76,98;UBERON:0003061,3.57e-76,98;UBERON:0002193,7.58e-68,108;UBERON:0002371,2.05e-55,76;UBERON:0001474,1.55e-50,82;UBERON:0004765,4.89e-45,90;UBERON:0002405,3.23e-43,93;UBERON:0001434,2.15e-39,100;UBERON:0000178,1.42e-30,15;UBERON:0000179,1.42e-30,15;UBERON:0000463,1.42e-30,15;UBERON:0003081,1.70e-29,203;UBERON:0002204,4.87e-19,167;UBERON:0000926,8.54e-15,315;UBERON:0004120,8.54e-15,315;UBERON:0006603,8.54e-15,315;UBERON:0002384,2.31e-14,371 | |||
|phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.629686250509434,11.8009283054671,11.8987113410136,5.41856431606266,0,0,0,0,0,0.587200878669695,174.508553687541,162.842091345755,120.441033247298,0,0,0,1.89017710413434,1.13362783106643,1.21292030593908,20.9186133215116,9.04569353648017,11.4591357231188,134.927731999089,97.8533898941164,103.815698921089,118.24776849266,68.4213764598856,47.3992703080196,5.45902784673554,4.09359225086769,6.06753408001728,180.895580391203,137.036694561492,118.277368272823,17.482118909896,39.4938042090831,22.1636870277001,189.506632824465,106.101037017243,91.5548706023495,48.2397437292947,67.7927793946262,53.6456446421638,157.403870684676,152.835218934839,105.065512630374,6.12640330304631,20.4100127966442,14.0471292490612,13.8164216310189,10.0618518203809,12.2151445889781,2.56511469367124,0.79566670879636,1.64397738388171,0,0,0,1.70692089026603,0,0,0,0,0.569212969109448,5.28513470433845,0.764546456250458,5.28685314316103,21.2993253932984,0,0.590129310341499,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,1.35517607169996,0.127986611154418,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.351339142772504,0,0,0,0,0,0,4.29283123749616,2.28797964312051,2.97166001063652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,253.018401477241,822.09415999445,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,2.1673383622212,0.431255149719035,3.20857590699371,0,0,0,0,0,143.060341573912,80.7735939850867,296.307092106765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9925455151275,70.5385436676877,29.9904437427679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.753150406214233,0,0,0,0,3.55213326462519,3.82318603571188,3.41788312304498,2.38231775457789,7.81588318863769,17.5087794022034,11.3406601820004,3.96562588147135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0.140669416410513,0,1.81284261649436,0,0.19924798825107,0.276283915531148,0,0,0.246169610922139,0,0,0,0,0,7.18449277040819,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.593042257361244,1.72989514525104,1.67075119208729,0,0,0,0.182454789215666,0,0,0,0,0,0.821425535170343,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.533937062838473,0,0.414239055347196,0,0,0,0,0,0,0,0.327872630709804,0,0,0.122026264901963,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,1.03328987796489,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.375935671919414,0.257831551894309,0,0,0,0,0,0,0.430018749454354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p1@MIR3945 | |||
}} |
Revision as of 04:16, 22 January 2014
Short description: | p1@MIR3945 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR3945_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -95bp_to_NR_037510_5end |
EntrezGene: | MIR3945 |
HGNC: | 38954 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.57e-76 | 98 |
blood island | 3.57e-76 | 98 |
hemolymphoid system | 7.58e-68 | 108 |
bone marrow | 2.05e-55 | 76 |
bone element | 1.55e-50 | 82 |
skeletal element | 4.89e-45 | 90 |
immune system | 3.23e-43 | 93 |
skeletal system | 2.15e-39 | 100 |
blood | 1.42e-30 | 15 |
haemolymphatic fluid | 1.42e-30 | 15 |
organism substance | 1.42e-30 | 15 |
lateral plate mesoderm | 1.70e-29 | 203 |
musculoskeletal system | 4.87e-19 | 167 |
mesoderm | 8.54e-15 | 315 |
mesoderm-derived structure | 8.54e-15 | 315 |
presumptive mesoderm | 8.54e-15 | 315 |
connective tissue | 2.31e-14 | 371 |